RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 DSTYKQ6XUX3 929 aa16.42■□□□□ 0.22
HOXD3-202ENST00000410016 CDHR5Q9HBB8 845 aa16.42■□□□□ 0.22
HOXD3-202ENST00000410016 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.42■□□□□ 0.22
HOXD3-202ENST00000410016 TAS2R1Q9NYW7 299 aa16.42■□□□□ 0.22
HOXD3-202ENST00000410016 MFHAS1Q9Y4C4 1052 aa16.42■□□□□ 0.22
HOXD3-202ENST00000410016 PCDHA11Q9Y5I1 949 aa16.42■□□□□ 0.22
HOXD3-202ENST00000410016 DGKIO75912 1065 aa16.42■□□□□ 0.22
HOXD3-202ENST00000410016 CRHR1P34998 444 aa16.42■□□□□ 0.22
HOXD3-202ENST00000410016 ZBTB16Q05516 673 aa16.42■□□□□ 0.22
HOXD3-202ENST00000410016 TMEM62Q0P6H9 643 aa16.42■□□□□ 0.22
HOXD3-202ENST00000410016 BST2Q10589 180 aaKnown RBP16.42■□□□□ 0.22
HOXD3-202ENST00000410016 MROH9Q5TGP6 573 aa16.42■□□□□ 0.22
HOXD3-202ENST00000410016 SLC27A1Q6PCB7 646 aa16.42■□□□□ 0.22
HOXD3-202ENST00000410016 BZW1Q7L1Q6 419 aaKnown RBP16.42■□□□□ 0.22
HOXD3-202ENST00000410016 GPRC5AQ8NFJ5 357 aa16.42■□□□□ 0.22
HOXD3-202ENST00000410016 E2F7Q96AV8 911 aa16.42■□□□□ 0.22
HOXD3-202ENST00000410016 MIEF2Q96C03 454 aa16.42■□□□□ 0.22
HOXD3-202ENST00000410016 OLFM3Q96PB7 478 aa16.42■□□□□ 0.22
HOXD3-202ENST00000410016 C20orf27Q9GZN8 174 aa16.42■□□□□ 0.22
HOXD3-202ENST00000410016 NMUR2Q9GZQ4 415 aa16.42■□□□□ 0.22
HOXD3-202ENST00000410016 ZNF395Q9H8N7 513 aaPredicted RBP16.42■□□□□ 0.22
HOXD3-202ENST00000410016 XAB2Q9HCS7 855 aaKnown RBP16.42■□□□□ 0.22
HOXD3-202ENST00000410016 KCNK4Q9NYG8 393 aa16.42■□□□□ 0.22
HOXD3-202ENST00000410016 FCHO1O14526 889 aa16.41■□□□□ 0.22
HOXD3-202ENST00000410016 GPR32O75388 356 aa16.41■□□□□ 0.22
HOXD3-202ENST00000410016 PDGFRBP09619 1106 aa16.41■□□□□ 0.22
HOXD3-202ENST00000410016 AMPD1P23109 780 aa16.41■□□□□ 0.22
HOXD3-202ENST00000410016 NBPF20Q3BBV1 942 aa16.41■□□□□ 0.22
HOXD3-202ENST00000410016 KHDC1Q4VXA5 237 aaKnown RBP16.41■□□□□ 0.22
HOXD3-202ENST00000410016 TIFABQ6ZNK6 161 aa16.41■□□□□ 0.22
HOXD3-202ENST00000410016 RINLQ6ZS11 566 aa16.41■□□□□ 0.22
HOXD3-202ENST00000410016 ADGRF2Q8IZF7 708 aa16.41■□□□□ 0.22
HOXD3-202ENST00000410016 PYROXD2Q8N2H3 581 aa16.41■□□□□ 0.22
HOXD3-202ENST00000410016 BEST2Q8NFU1 509 aa16.41■□□□□ 0.22
HOXD3-202ENST00000410016 ANKRD27Q96NW4 1050 aa16.41■□□□□ 0.22
HOXD3-202ENST00000410016 SETD4Q9NVD3 440 aa16.41■□□□□ 0.22
HOXD3-202ENST00000410016 GINS2Q9Y248 185 aa16.41■□□□□ 0.22
HOXD3-202ENST00000410016 KAT6AQ92794 2004 aa16.41■□□□□ 0.22
HOXD3-202ENST00000410016 PIRO00625 290 aa16.41■□□□□ 0.22
HOXD3-202ENST00000410016 SPTLC1O15269 473 aa16.41■□□□□ 0.22
HOXD3-202ENST00000410016 SNNO75324 88 aaPredicted RBP16.41■□□□□ 0.22
HOXD3-202ENST00000410016 ALDH1A2O94788 518 aa16.41■□□□□ 0.22
HOXD3-202ENST00000410016 MYCNP04198 464 aaPredicted RBP16.41■□□□□ 0.22
HOXD3-202ENST00000410016 LCP1P13796 627 aa16.41■□□□□ 0.22
HOXD3-202ENST00000410016 VAV1P15498 845 aa16.41■□□□□ 0.22
HOXD3-202ENST00000410016 GOT1P17174 413 aa16.41■□□□□ 0.22
HOXD3-202ENST00000410016 SMPD1P17405 629 aa16.41■□□□□ 0.22
HOXD3-202ENST00000410016 BCAT1P54687 386 aa16.41■□□□□ 0.22
HOXD3-202ENST00000410016 ALYREFQ86V81 257 aaKnown RBP16.41■□□□□ 0.22
HOXD3-202ENST00000410016 NDUFAF2Q8N183 169 aa16.41■□□□□ 0.22
HOXD3-202ENST00000410016 FBXO41Q8TF61 875 aa16.41■□□□□ 0.22
HOXD3-202ENST00000410016 ARHGEF4Q9NR80 690 aa16.41■□□□□ 0.22
HOXD3-202ENST00000410016 CAPN14A8MX76 684 aa16.4■□□□□ 0.22
HOXD3-202ENST00000410016 GYG2O15488 501 aa16.4■□□□□ 0.22
HOXD3-202ENST00000410016 GSRP00390 522 aa16.4■□□□□ 0.22
HOXD3-202ENST00000410016 MMP3P08254 477 aa16.4■□□□□ 0.22
HOXD3-202ENST00000410016 RARBP10826 455 aa16.4■□□□□ 0.22
HOXD3-202ENST00000410016 ADORA2BP29275 332 aa16.4■□□□□ 0.22
HOXD3-202ENST00000410016 TMPRSS15P98073 1019 aa16.4■□□□□ 0.22
HOXD3-202ENST00000410016 CHI3L2Q15782 390 aa16.4■□□□□ 0.22
HOXD3-202ENST00000410016 ZNF618Q5T7W0 954 aa16.4■□□□□ 0.22
HOXD3-202ENST00000410016 ATG16L1Q676U5 607 aa16.4■□□□□ 0.22
HOXD3-202ENST00000410016 HEATR6Q6AI08 1181 aaKnown RBP16.4■□□□□ 0.22
HOXD3-202ENST00000410016 TRIM42Q8IWZ5 723 aa16.4■□□□□ 0.22
HOXD3-202ENST00000410016 UNC5BQ8IZJ1 945 aa16.4■□□□□ 0.22
HOXD3-202ENST00000410016 HTR3CQ8WXA8 447 aa16.4■□□□□ 0.22
HOXD3-202ENST00000410016 NXF3Q9H4D5 531 aaKnown RBP16.4■□□□□ 0.22
HOXD3-202ENST00000410016 DCLRE1BQ9H816 532 aa16.4■□□□□ 0.22
HOXD3-202ENST00000410016 BATF3Q9NR55 127 aa16.4■□□□□ 0.22
HOXD3-202ENST00000410016 ARMCX1Q9P291 453 aa16.4■□□□□ 0.22
HOXD3-202ENST00000410016 ECM2O94769 699 aaPredicted RBP16.4■□□□□ 0.22
HOXD3-202ENST00000410016 TOP3BO95985 862 aaKnown RBP16.4■□□□□ 0.22
HOXD3-202ENST00000410016 BPGMP07738 259 aa16.4■□□□□ 0.22
HOXD3-202ENST00000410016 GNL1P36915 607 aaPredicted RBP16.4■□□□□ 0.22
HOXD3-202ENST00000410016 SERPINB9P50453 376 aa16.4■□□□□ 0.22
HOXD3-202ENST00000410016 NAA25Q14CX7 972 aa16.4■□□□□ 0.22
HOXD3-202ENST00000410016 STEAP4Q687X5 459 aa16.4■□□□□ 0.22
HOXD3-202ENST00000410016 STRADAQ7RTN6 431 aa16.4■□□□□ 0.22
HOXD3-202ENST00000410016 NUDCD3Q8IVD9 361 aa16.4■□□□□ 0.22
HOXD3-202ENST00000410016 LGMNQ99538 433 aa16.4■□□□□ 0.22
HOXD3-202ENST00000410016 PCMTD2Q9NV79 361 aa16.4■□□□□ 0.22
HOXD3-202ENST00000410016 H0Y3Z8 333 aa16.39■□□□□ 0.21
HOXD3-202ENST00000410016 I3L4J1 428 aa16.39■□□□□ 0.21
HOXD3-202ENST00000410016 RECQL4O94761 1208 aa16.39■□□□□ 0.21
HOXD3-202ENST00000410016 PTDSS1P48651 473 aaKnown RBP16.39■□□□□ 0.21
HOXD3-202ENST00000410016 SNAPC2Q13487 334 aa16.39■□□□□ 0.21
HOXD3-202ENST00000410016 DUSP28Q4G0W2 176 aa16.39■□□□□ 0.21
HOXD3-202ENST00000410016 FBXO47Q5MNV8 452 aa16.39■□□□□ 0.21
HOXD3-202ENST00000410016 DENND5BQ6ZUT9 1274 aa16.39■□□□□ 0.21
HOXD3-202ENST00000410016 CATSPER4Q7RTX7 472 aa16.39■□□□□ 0.21
HOXD3-202ENST00000410016 LIMS2Q7Z4I7 341 aa16.39■□□□□ 0.21
HOXD3-202ENST00000410016 ZNF467Q7Z7K2 595 aaPredicted RBP16.39■□□□□ 0.21
HOXD3-202ENST00000410016 ARID3BQ8IVW6 561 aaPredicted RBP16.39■□□□□ 0.21
HOXD3-202ENST00000410016 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.39■□□□□ 0.21
HOXD3-202ENST00000410016 STKLD1Q8NE28 680 aa16.39■□□□□ 0.21
HOXD3-202ENST00000410016 TFB1MQ8WVM0 346 aaKnown RBP16.39■□□□□ 0.21
HOXD3-202ENST00000410016 NAF1Q96HR8 494 aaKnown RBP16.39■□□□□ 0.21
HOXD3-202ENST00000410016 HSFY1Q96LI6 401 aa16.39■□□□□ 0.21
HOXD3-202ENST00000410016 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.39■□□□□ 0.21
HOXD3-202ENST00000410016 A0A0A0MRY4 1105 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms