RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 USP43Q70EL4 1123 aa3.26□□□□□ -1.89
RGPD3-202ENST00000409886 TRABD2AQ86V40 505 aa3.26□□□□□ -1.89
RGPD3-202ENST00000409886 MCOLN2Q8IZK6 566 aa3.26□□□□□ -1.89
RGPD3-202ENST00000409886 SPATA5Q8NB90 893 aa3.26□□□□□ -1.89
RGPD3-202ENST00000409886 TRIM58Q8NG06 486 aa3.26□□□□□ -1.89
RGPD3-202ENST00000409886 DYDC2Q96IM9 177 aa3.26□□□□□ -1.89
RGPD3-202ENST00000409886 CPB2Q96IY4 423 aa3.26□□□□□ -1.89
RGPD3-202ENST00000409886 SERAC1Q96JX3 654 aa3.26□□□□□ -1.89
RGPD3-202ENST00000409886 GCNAQ96QF7 691 aa3.26□□□□□ -1.89
RGPD3-202ENST00000409886 TMEM47Q9BQJ4 181 aa3.26□□□□□ -1.89
RGPD3-202ENST00000409886 MFSD1Q9H3U5 465 aa3.26□□□□□ -1.89
RGPD3-202ENST00000409886 RMI1Q9H9A7 625 aa3.26□□□□□ -1.89
RGPD3-202ENST00000409886 NPHS2Q9NP85 383 aa3.26□□□□□ -1.89
RGPD3-202ENST00000409886 GPR108Q9NPR9 543 aa3.26□□□□□ -1.89
RGPD3-202ENST00000409886 DZANK1Q9NVP4 752 aa3.26□□□□□ -1.89
RGPD3-202ENST00000409886 MFHAS1Q9Y4C4 1052 aa3.26□□□□□ -1.89
RGPD3-202ENST00000409886 NAV3Q8IVL0 2385 aa3.26□□□□□ -1.89
RGPD3-202ENST00000409886 NCOA6Q14686 2063 aaPredicted RBP3.26□□□□□ -1.89
RGPD3-202ENST00000409886 LOC100653049A0A140TA62 436 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 CFAP69A5D8W1 941 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 EIF3FO00303 357 aaPredicted RBP3.25□□□□□ -1.89
RGPD3-202ENST00000409886 ITM2AO43736 263 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 SUPT3HO75486 399 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 KRT34O76011 436 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 ALDH1A2O94788 518 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 PRSS23O95084 383 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 ATE1O95260 518 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 PAPSS2O95340 614 aaPredicted RBP3.25□□□□□ -1.89
RGPD3-202ENST00000409886 BMP3P12645 472 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 CSRP1P21291 193 aaKnown RBP3.25□□□□□ -1.89
RGPD3-202ENST00000409886 TNFRSF8P28908 595 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 NDST2P52849 883 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 PRPF4BQ13523 1007 aaKnown RBP3.25□□□□□ -1.89
RGPD3-202ENST00000409886 METTL24Q5JXM2 366 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 IYDQ6PHW0 289 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 FBXO11Q86XK2 927 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 GIMAP7Q8NHV1 300 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 MORC4Q8TE76 937 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 FUBP1Q96AE4 644 aaKnown RBP3.25□□□□□ -1.89
RGPD3-202ENST00000409886 ITCHQ96J02 903 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 ACAP3Q96P50 834 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 ALS2CR12Q96Q35 445 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 GRIP2Q9C0E4 1043 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 CCDC113Q9H0I3 377 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 UBN1Q9NPG3 1134 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 IGSF9Q9P2J2 1179 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 LZTS1Q9Y250 596 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 PCDHB13Q9Y5F0 798 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 USH1CQ9Y6N9 552 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 NUP210LQ5VU65 1888 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 NUP210Q8TEM1 1887 aaPredicted RBP3.25□□□□□ -1.89
RGPD3-202ENST00000409886 ATXN2Q99700 1313 aaKnown RBP3.25□□□□□ -1.89
RGPD3-202ENST00000409886 DNAJC25-GNG10A0A024R161 153 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.25□□□□□ -1.89
RGPD3-202ENST00000409886 FBXO21O94952 628 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 C1RP00736 705 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 ERBB2P04626 1255 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 NFKBIAP25963 317 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 ACOT2P49753 483 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 NUMBP49757 651 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 ASIC1P78348 528 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 TFAP4Q01664 338 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 OCRLQ01968 901 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 HNRNPDQ14103 355 aaKnown RBP3.25□□□□□ -1.89
RGPD3-202ENST00000409886 DLG2Q15700 870 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 SEZ6Q53EL9 994 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 PPM1LQ5SGD2 360 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 SH3BP5LQ7L8J4 393 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 PALM2Q8IXS6 379 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 PNMA1Q8ND90 353 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 EPS8L1Q8TE68 723 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 SLC39A3Q9BRY0 314 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 SPATC1LQ9H0A9 340 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 LRMDAQ9H2I8 198 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 SPATS2LQ9NUQ6 558 aaKnown RBP3.25□□□□□ -1.89
RGPD3-202ENST00000409886 CYP39A1Q9NYL5 469 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 HOOK1Q9UJC3 728 aaKnown RBP3.25□□□□□ -1.89
RGPD3-202ENST00000409886 GGA2Q9UJY4 613 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 MSRB2Q9Y3D2 182 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 FER1L5A0AVI2 2057 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 ABCA12Q86UK0 2595 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 H3BQ06 376 aaPredicted RBP3.25□□□□□ -1.89
RGPD3-202ENST00000409886 ATP2A1O14983 1001 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 AHCYL1O43865 530 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 LYPLA1O75608 230 aaPredicted RBP3.25□□□□□ -1.89
RGPD3-202ENST00000409886 KIAA0754O94854 1291 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 MT-ND1P03886 318 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 ARFIP2P53365 341 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 IRX1P78414 480 aaPredicted RBP3.25□□□□□ -1.89
RGPD3-202ENST00000409886 IFIT5Q13325 482 aaKnown RBP3.25□□□□□ -1.89
RGPD3-202ENST00000409886 MTA1Q13330 715 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 CCNIQ14094 377 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 UBAP2LQ14157 1087 aaKnown RBP3.25□□□□□ -1.89
RGPD3-202ENST00000409886 AP1ARQ63HQ0 302 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 ANKRD54Q6NXT1 300 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 KLC3Q6P597 504 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 ARHGAP22Q7Z5H3 698 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 ABI3BPQ7Z7G0 1075 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 DGKHQ86XP1 1220 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 SCUBE1Q8IWY4 988 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms