RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 PPP1R21Q6ZMI0 780 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 BZW1Q7L1Q6 419 aaKnown RBP7.79□□□□□ -1.16
CXCR4-202ENST00000409817 RNF180Q86T96 592 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 FUKQ8N0W3 1084 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 GSTCDQ8NEC7 633 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 ACSF2Q96CM8 615 aaPredicted RBP7.79□□□□□ -1.16
CXCR4-202ENST00000409817 PIWIL1Q96J94 861 aaKnown RBP7.79□□□□□ -1.16
CXCR4-202ENST00000409817 SENP8Q96LD8 212 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 UROC1Q96N76 676 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 ARHGAP39Q9C0H5 1083 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 GOLGA2P5Q9HBQ8 144 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.79□□□□□ -1.16
CXCR4-202ENST00000409817 NINJ2Q9NZG7 142 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 FETUBQ9UGM5 382 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 DSEQ9UL01 958 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 CDH9Q9ULB4 789 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 STAP1Q9ULZ2 295 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 ACTL7BQ9Y614 415 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 A0A087WUV0 522 aaPredicted RBP7.79□□□□□ -1.16
CXCR4-202ENST00000409817 ARL5CA6NH57 179 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 APOL1O14791 398 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 ALOX15BO15296 676 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 INPPL1O15357 1258 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 DAB1O75553 588 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 ACSL3O95573 720 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 IFNB1P01574 187 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 CD48P09326 243 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 FAM200BP0CF97 657 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 THPOP40225 353 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 MLH1P40692 756 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 HDAC4P56524 1084 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 DYNLT1P63172 113 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 ATP11AP98196 1134 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 GRIK3Q13003 919 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 XRCC4Q13426 336 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 AUHQ13825 339 aaKnown RBP7.79□□□□□ -1.16
CXCR4-202ENST00000409817 KYNUQ16719 465 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 CDO1Q16878 200 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 CCDC142Q17RM4 750 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 SLC25A52Q3SY17 297 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 ANKRD20A8PQ5CZ79 823 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 MAP3K21Q5TCX8 1036 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 SCYL2Q6P3W7 929 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 PIGZQ86VD9 579 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 OSTM1Q86WC4 334 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 BCAS4Q8TDM0 211 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 PRCCQ92733 491 aaPredicted RBP7.79□□□□□ -1.16
CXCR4-202ENST00000409817 RTP4Q96DX8 246 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 ZFP42Q96MM3 310 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 FAM161BQ96MY7 647 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 GAD1Q99259 594 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 FAM118BQ9BPY3 351 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 SNRNP25Q9BV90 132 aaKnown RBP7.79□□□□□ -1.16
CXCR4-202ENST00000409817 SEZ6LQ9BYH1 1024 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 FAM107BQ9H098 131 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 LRRC4Q9HBW1 653 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 PCDH18Q9HCL0 1135 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 DDX43Q9NXZ2 648 aaKnown RBP7.79□□□□□ -1.16
CXCR4-202ENST00000409817 RRN3Q9NYV6 651 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 PAK5Q9P286 719 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 LGALS13Q9UHV8 139 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 PADI3Q9ULW8 664 aa7.79□□□□□ -1.16
CXCR4-202ENST00000409817 TLDC2A0PJX2 215 aa7.78□□□□□ -1.16
CXCR4-202ENST00000409817 BCLAF3A2AJT9 711 aaKnown RBP7.78□□□□□ -1.16
CXCR4-202ENST00000409817 E7EVH7 732 aa7.78□□□□□ -1.16
CXCR4-202ENST00000409817 GRAP2O75791 330 aa7.78□□□□□ -1.16
CXCR4-202ENST00000409817 CTSHP09668 335 aa7.78□□□□□ -1.16
CXCR4-202ENST00000409817 ODC1P11926 461 aa7.78□□□□□ -1.16
CXCR4-202ENST00000409817 PECAM1P16284 738 aaPredicted RBP7.78□□□□□ -1.16
CXCR4-202ENST00000409817 PHBP35232 272 aa7.78□□□□□ -1.16
CXCR4-202ENST00000409817 CTCFP49711 727 aaPredicted RBP7.78□□□□□ -1.16
CXCR4-202ENST00000409817 ZNF135P52742 658 aaPredicted RBP7.78□□□□□ -1.16
CXCR4-202ENST00000409817 HNRNPH2P55795 449 aaKnown RBP7.78□□□□□ -1.16
CXCR4-202ENST00000409817 ARL4CP56559 192 aa7.78□□□□□ -1.16
CXCR4-202ENST00000409817 BCAR1P56945 870 aa7.78□□□□□ -1.16
CXCR4-202ENST00000409817 YWHAZP63104 245 aaKnown RBP7.78□□□□□ -1.16
CXCR4-202ENST00000409817 MRPS5P82675 430 aaKnown RBP7.78□□□□□ -1.16
CXCR4-202ENST00000409817 GUCY1A3Q02108 690 aa7.78□□□□□ -1.16
CXCR4-202ENST00000409817 MAPRE1Q15691 268 aaKnown RBP7.78□□□□□ -1.16
CXCR4-202ENST00000409817 HIF1AQ16665 826 aa7.78□□□□□ -1.16
CXCR4-202ENST00000409817 UPP1Q16831 310 aa7.78□□□□□ -1.16
CXCR4-202ENST00000409817 WSCD1Q658N2 575 aa7.78□□□□□ -1.16
CXCR4-202ENST00000409817 DSTYKQ6XUX3 929 aa7.78□□□□□ -1.16
CXCR4-202ENST00000409817 AGMOQ6ZNB7 445 aa7.78□□□□□ -1.16
CXCR4-202ENST00000409817 B4GALNT4Q76KP1 1039 aa7.78□□□□□ -1.16
CXCR4-202ENST00000409817 METTL23Q86XA0 190 aa7.78□□□□□ -1.16
CXCR4-202ENST00000409817 TDRPQ86YL5 185 aa7.78□□□□□ -1.16
CXCR4-202ENST00000409817 SIX6OS1Q8N1H7 587 aa7.78□□□□□ -1.16
CXCR4-202ENST00000409817 PLD5Q8N7P1 536 aa7.78□□□□□ -1.16
CXCR4-202ENST00000409817 NAT8LQ8N9F0 302 aa7.78□□□□□ -1.16
CXCR4-202ENST00000409817 RNF217Q8TC41 542 aa7.78□□□□□ -1.16
CXCR4-202ENST00000409817 GPR152Q8TDT2 470 aa7.78□□□□□ -1.16
CXCR4-202ENST00000409817 NT5C3BQ969T7 300 aa7.78□□□□□ -1.16
CXCR4-202ENST00000409817 SLC9A7Q96T83 725 aa7.78□□□□□ -1.16
CXCR4-202ENST00000409817 SYT15Q9BQS2 421 aa7.78□□□□□ -1.16
CXCR4-202ENST00000409817 TRIM62Q9BVG3 475 aa7.78□□□□□ -1.16
CXCR4-202ENST00000409817 B3GNT5Q9BYG0 378 aa7.78□□□□□ -1.16
CXCR4-202ENST00000409817 CNGB3Q9NQW8 809 aa7.78□□□□□ -1.16
CXCR4-202ENST00000409817 TMEM51Q9NW97 253 aa7.78□□□□□ -1.16
CXCR4-202ENST00000409817 SRRDQ9UH36 339 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms