RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 LZTFL1Q9NQ48 299 aa17.21■□□□□ 0.35
TSPAN4-208ENST00000409531 DNMT3LQ9UJW3 386 aa17.21■□□□□ 0.35
TSPAN4-208ENST00000409531 FBXL21Q9UKT6 434 aa17.21■□□□□ 0.35
TSPAN4-208ENST00000409531 GUCA1BQ9UMX6 200 aa17.21■□□□□ 0.35
TSPAN4-208ENST00000409531 ZKSCAN5Q9Y2L8 839 aa17.21■□□□□ 0.35
TSPAN4-208ENST00000409531 MUC6Q6W4X9 2439 aa17.21■□□□□ 0.35
TSPAN4-208ENST00000409531 TRAV19A0A0A6YYK7 116 aa17.21■□□□□ 0.34
TSPAN4-208ENST00000409531 MACROD2A1Z1Q3 448 aa17.21■□□□□ 0.34
TSPAN4-208ENST00000409531 RNF8O76064 485 aa17.21■□□□□ 0.34
TSPAN4-208ENST00000409531 PSMA2P25787 234 aa17.21■□□□□ 0.34
TSPAN4-208ENST00000409531 WEE1P30291 646 aa17.21■□□□□ 0.34
TSPAN4-208ENST00000409531 VIPR2P41587 438 aa17.21■□□□□ 0.34
TSPAN4-208ENST00000409531 KPNA1P52294 538 aaPredicted RBP17.21■□□□□ 0.34
TSPAN4-208ENST00000409531 CYP4F8P98187 520 aa17.21■□□□□ 0.34
TSPAN4-208ENST00000409531 NNTQ13423 1086 aa17.21■□□□□ 0.34
TSPAN4-208ENST00000409531 TXNDC8Q6A555 127 aa17.21■□□□□ 0.34
TSPAN4-208ENST00000409531 CCAR2Q8N163 923 aaKnown RBP17.21■□□□□ 0.34
TSPAN4-208ENST00000409531 FBXL6Q8N531 539 aa17.21■□□□□ 0.34
TSPAN4-208ENST00000409531 PGAP3Q96FM1 320 aaPredicted RBP17.21■□□□□ 0.34
TSPAN4-208ENST00000409531 CFAP57Q96MR6 1250 aa17.21■□□□□ 0.34
TSPAN4-208ENST00000409531 SERPINB11Q96P15 392 aa17.21■□□□□ 0.34
TSPAN4-208ENST00000409531 NPY6RQ99463 290 aa17.21■□□□□ 0.34
TSPAN4-208ENST00000409531 SLC46A2Q9BY10 475 aa17.21■□□□□ 0.34
TSPAN4-208ENST00000409531 KCND1Q9NSA2 647 aa17.21■□□□□ 0.34
TSPAN4-208ENST00000409531 PAXBP1Q9Y5B6 917 aa17.21■□□□□ 0.34
TSPAN4-208ENST00000409531 DUSP10Q9Y6W6 482 aa17.21■□□□□ 0.34
TSPAN4-208ENST00000409531 C2orf78A6NCI8 922 aa17.2■□□□□ 0.34
TSPAN4-208ENST00000409531 COCHO43405 550 aa17.2■□□□□ 0.34
TSPAN4-208ENST00000409531 BUB1O43683 1085 aa17.2■□□□□ 0.34
TSPAN4-208ENST00000409531 TRUB2O95900 331 aaKnown RBP17.2■□□□□ 0.34
TSPAN4-208ENST00000409531 HDCP19113 662 aa17.2■□□□□ 0.34
TSPAN4-208ENST00000409531 AVPR1AP37288 418 aa17.2■□□□□ 0.34
TSPAN4-208ENST00000409531 SULT1E1P49888 294 aa17.2■□□□□ 0.34
TSPAN4-208ENST00000409531 PFKPQ01813 784 aa17.2■□□□□ 0.34
TSPAN4-208ENST00000409531 EFEMP1Q12805 493 aa17.2■□□□□ 0.34
TSPAN4-208ENST00000409531 CCDC14Q49A88 953 aa17.2■□□□□ 0.34
TSPAN4-208ENST00000409531 TRNP1Q6NT89 227 aa17.2■□□□□ 0.34
TSPAN4-208ENST00000409531 SND1Q7KZF4 910 aaKnown RBP eCLIP17.2■□□□□ 0.345e-7■■■□□ 16.2
TSPAN4-208ENST00000409531 STRADAQ7RTN6 431 aa17.2■□□□□ 0.34
TSPAN4-208ENST00000409531 MFSD6LQ8IWD5 586 aa17.2■□□□□ 0.34
TSPAN4-208ENST00000409531 NIPA2Q8N8Q9 360 aa17.2■□□□□ 0.34
TSPAN4-208ENST00000409531 MAB21L3Q8N8X9 362 aa17.2■□□□□ 0.34
TSPAN4-208ENST00000409531 KIAA1524Q8TCG1 905 aa17.2■□□□□ 0.34
TSPAN4-208ENST00000409531 DQX1Q8TE96 717 aaKnown RBP17.2■□□□□ 0.34
TSPAN4-208ENST00000409531 TRMT61BQ9BVS5 477 aaKnown RBP17.2■□□□□ 0.34
TSPAN4-208ENST00000409531 FAM204AQ9H8W3 233 aa17.2■□□□□ 0.34
TSPAN4-208ENST00000409531 TRMT1Q9NXH9 659 aaKnown RBP17.2■□□□□ 0.34
TSPAN4-208ENST00000409531 MARCH2Q9P0N8 246 aa17.2■□□□□ 0.34
TSPAN4-208ENST00000409531 RASAL2Q9UJF2 1139 aa17.2■□□□□ 0.34
TSPAN4-208ENST00000409531 A0A0U1RQJ8 604 aa17.19■□□□□ 0.34
TSPAN4-208ENST00000409531 M0QYT0 321 aa17.19■□□□□ 0.34
TSPAN4-208ENST00000409531 PROSCO94903 275 aa17.19■□□□□ 0.34
TSPAN4-208ENST00000409531 OLFM2O95897 454 aa17.19■□□□□ 0.34
TSPAN4-208ENST00000409531 PDGFBP01127 241 aaPredicted RBP17.19■□□□□ 0.34
TSPAN4-208ENST00000409531 CKMP06732 381 aa17.19■□□□□ 0.34
TSPAN4-208ENST00000409531 MBL2P11226 248 aaPredicted RBP17.19■□□□□ 0.34
TSPAN4-208ENST00000409531 PSMC3P17980 439 aa17.19■□□□□ 0.34
TSPAN4-208ENST00000409531 MAN1A1P33908 653 aa17.19■□□□□ 0.34
TSPAN4-208ENST00000409531 COG7P83436 770 aa17.19■□□□□ 0.34
TSPAN4-208ENST00000409531 ATP11AP98196 1134 aa17.19■□□□□ 0.34
TSPAN4-208ENST00000409531 DEUP1Q05D60 604 aa17.19■□□□□ 0.34
TSPAN4-208ENST00000409531 MESDQ14696 234 aa17.19■□□□□ 0.34
TSPAN4-208ENST00000409531 C11orf63Q6NUN7 778 aa17.19■□□□□ 0.34
TSPAN4-208ENST00000409531 VITQ6UXI7 678 aa17.19■□□□□ 0.34
TSPAN4-208ENST00000409531 TAC4Q86UU9 113 aa17.19■□□□□ 0.34
TSPAN4-208ENST00000409531 SUGP1Q8IWZ8 645 aaKnown RBP17.19■□□□□ 0.34
TSPAN4-208ENST00000409531 REXO1L1PQ8IX06 675 aa17.19■□□□□ 0.34
TSPAN4-208ENST00000409531 CMTM8Q8IZV2 173 aa17.19■□□□□ 0.34
TSPAN4-208ENST00000409531 SYCE1Q8N0S2 351 aa17.19■□□□□ 0.34
TSPAN4-208ENST00000409531 SIX5Q8N196 739 aa17.19■□□□□ 0.34
TSPAN4-208ENST00000409531 TPCN2Q8NHX9 752 aa17.19■□□□□ 0.34
TSPAN4-208ENST00000409531 FAM172AQ8WUF8 416 aa17.19■□□□□ 0.34
TSPAN4-208ENST00000409531 DEPDC1BQ8WUY9 529 aa17.19■□□□□ 0.34
TSPAN4-208ENST00000409531 ATRIPQ8WXE1 791 aa17.19■□□□□ 0.34
TSPAN4-208ENST00000409531 CENPIQ92674 756 aaPredicted RBP17.19■□□□□ 0.34
TSPAN4-208ENST00000409531 ALS2CR12Q96Q35 445 aa17.19■□□□□ 0.34
TSPAN4-208ENST00000409531 TBCBQ99426 244 aa17.19■□□□□ 0.34
TSPAN4-208ENST00000409531 TRIM7Q9C029 511 aa17.19■□□□□ 0.34
TSPAN4-208ENST00000409531 MFSD1Q9H3U5 465 aa17.19■□□□□ 0.34
TSPAN4-208ENST00000409531 DDIT4Q9NX09 232 aa17.19■□□□□ 0.34
TSPAN4-208ENST00000409531 TRIM10Q9UDY6 481 aa17.19■□□□□ 0.34
TSPAN4-208ENST00000409531 SALL4Q9UJQ4 1053 aa17.19■□□□□ 0.34
TSPAN4-208ENST00000409531 NUDT5Q9UKK9 219 aa17.19■□□□□ 0.34
TSPAN4-208ENST00000409531 HEPACAM2A8MVW5 462 aa17.18■□□□□ 0.34
TSPAN4-208ENST00000409531 IRAK2O43187 625 aa17.18■□□□□ 0.34
TSPAN4-208ENST00000409531 ENDOD1O94919 500 aa17.18■□□□□ 0.34
TSPAN4-208ENST00000409531 TBX18O95935 607 aa17.18■□□□□ 0.34
TSPAN4-208ENST00000409531 IGLV3-25P01717 112 aa17.18■□□□□ 0.34
TSPAN4-208ENST00000409531 SLC2A3P11169 496 aa17.18■□□□□ 0.34
TSPAN4-208ENST00000409531 RDXP35241 583 aaKnown RBP17.18■□□□□ 0.34
TSPAN4-208ENST00000409531 SLC1A1P43005 524 aa17.18■□□□□ 0.34
TSPAN4-208ENST00000409531 SLC7A9P82251 487 aa17.18■□□□□ 0.34
TSPAN4-208ENST00000409531 OGDHQ02218 1023 aa17.18■□□□□ 0.34
TSPAN4-208ENST00000409531 CDO1Q16878 200 aa17.18■□□□□ 0.34
TSPAN4-208ENST00000409531 C15orf59Q2T9L4 293 aaPredicted RBP17.18■□□□□ 0.34
TSPAN4-208ENST00000409531 DAAM2Q86T65 1068 aa17.18■□□□□ 0.34
TSPAN4-208ENST00000409531 DDX42Q86XP3 938 aaKnown RBP eCLIP17.18■□□□□ 0.34
TSPAN4-208ENST00000409531 MIB1Q86YT6 1006 aa17.18■□□□□ 0.34
TSPAN4-208ENST00000409531 ARL14EPQ8N8R7 260 aaPredicted RBP17.18■□□□□ 0.34
TSPAN4-208ENST00000409531 UBE2Q2Q8WVN8 375 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms