RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 ZMIZ2Q8NF64 920 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 CPT1BQ92523 772 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 NDRG1Q92597 394 aaKnown RBP6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 SEPT8Q92599 483 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 PRCCQ92733 491 aaPredicted RBP6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 APBB2Q92870 758 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 MYLPFQ96A32 169 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 NTAN1Q96AB6 310 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 CSPG4P5Q96PW8 444 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 PSMG3-AS1Q96PY0 264 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 PKMYT1Q99640 499 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 KRTAP9-2Q9BYQ4 174 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 SAYSD1Q9NPB0 183 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 MTMR10Q9NXD2 777 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 CWC15Q9P013 229 aaKnown RBP6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 FBXW11Q9UKB1 542 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 NAALADL1Q9UQQ1 740 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 TRIM17Q9Y577 477 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 PCDHB7Q9Y5E2 793 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 HEY1Q9Y5J3 304 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 YJEFN3A6XGL0 299 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 E7ENQ6 273 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 I3L4J1 428 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 NRP1O14786 923 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 SYN3O14994 580 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 KCNN4O15554 427 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 HOXA2O43364 376 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 CDH16O75309 829 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 TADA2AO75478 443 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 GCATO75600 419 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 DDHD2O94830 711 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 ALDH2P05091 517 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 FYNP06241 537 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 USP17L7P0C7H9 530 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 NCAM1P13591 858 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 TSHRP16473 764 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 ATP2A2P16615 1042 aaKnown RBP6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 BDNFP23560 247 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 PHBP35232 272 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 OR1G1P47890 313 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 ATP1A2P50993 1020 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 ATXN1P54253 815 aaKnown RBP6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 GDF10P55107 478 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 GNGT1P63211 74 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 PDIA2Q13087 525 aaKnown RBP6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 NME3Q13232 169 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 NFE2Q16621 373 aaPredicted RBP6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 SKIDA1Q1XH10 827 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 PAN2Q504Q3 1202 aaKnown RBP6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 PLEKHG4Q58EX7 1191 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 CLLU1OSQ5K130 101 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 NPNTQ6UXI9 565 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 LRRTM3Q86VH5 581 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 ZNF280BQ86YH2 543 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 KRTAP1-3Q8IUG1 177 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 SPATA2LQ8IUW3 424 aaPredicted RBP6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 RIBC1Q8N443 379 aaPredicted RBP6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 CCDC185Q8N715 623 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 UHMK1Q8TAS1 419 aaKnown RBP6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 SLC7A14Q8TBB6 771 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 PYROXD1Q8WU10 500 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 CENPTQ96BT3 561 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 C9orf72Q96LT7 481 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 PWWP2AQ96N64 755 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 KCTD15Q96SI1 283 aaPredicted RBP6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 COLEC11Q9BWP8 271 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 C10orf88Q9H8K7 445 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 TBC1D13Q9NVG8 400 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 RAD54BQ9Y620 910 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 USP3Q9Y6I4 520 aa6.5□□□□□ -1.37
GTF3C3-202ENST00000409364 RALGAPA2Q2PPJ7 1873 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 C5orf60A6NFR6 353 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 E7ESA3 106 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 CHADO15335 359 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 NCAM2O15394 837 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 STK10O94804 968 aaKnown RBP6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 AMPD1P23109 780 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 RBL1P28749 1068 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 GRIK1P39086 918 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 MMP13P45452 471 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 CXCR3P49682 368 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 CACNA2D1P54289 1103 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 BASP1P80723 227 aaKnown RBP6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 SCAPQ12770 1279 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 NR1H3Q13133 447 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 PDK1Q15118 436 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 RASA2Q15283 850 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 ZSCAN26Q16670 478 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 SLC45A4Q5BKX6 768 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 BSPRYQ5W0U4 402 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 KCNT2Q6UVM3 1135 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 VSTM1Q6UX27 236 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 LRRC31Q6UY01 552 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 HFE2Q6ZVN8 426 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 TDRPQ86YL5 185 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 PALM2Q8IXS6 379 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 FAM126BQ8IXS8 530 aa6.49□□□□□ -1.37
GTF3C3-202ENST00000409364 ZBED8Q8IZ13 594 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms