RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 SORCS1Q8WY21 1168 aa13.54□□□□□ -0.24
CHRNA1-203ENST00000409219 TMEM176AQ96HP8 235 aa13.54□□□□□ -0.24
CHRNA1-203ENST00000409219 PIWIL1Q96J94 861 aaKnown RBP13.54□□□□□ -0.24
CHRNA1-203ENST00000409219 CNDP2Q96KP4 475 aaKnown RBP13.54□□□□□ -0.24
CHRNA1-203ENST00000409219 SMOQ99835 787 aa13.54□□□□□ -0.24
CHRNA1-203ENST00000409219 SMYD3Q9H7B4 428 aa13.54□□□□□ -0.24
CHRNA1-203ENST00000409219 ELOVL2Q9NXB9 296 aa13.54□□□□□ -0.24
CHRNA1-203ENST00000409219 STK17AQ9UEE5 414 aa13.54□□□□□ -0.24
CHRNA1-203ENST00000409219 NUDT5Q9UKK9 219 aa13.54□□□□□ -0.24
CHRNA1-203ENST00000409219 TSPAN3O60637 253 aa13.53□□□□□ -0.24
CHRNA1-203ENST00000409219 STC2O76061 302 aa13.53□□□□□ -0.24
CHRNA1-203ENST00000409219 LDOC1O95751 146 aaPredicted RBP13.53□□□□□ -0.24
CHRNA1-203ENST00000409219 SEMA4FO95754 770 aa13.53□□□□□ -0.24
CHRNA1-203ENST00000409219 C1SP09871 688 aa13.53□□□□□ -0.24
CHRNA1-203ENST00000409219 DLATP10515 647 aaKnown RBP13.53□□□□□ -0.24
CHRNA1-203ENST00000409219 CD27P26842 260 aa13.53□□□□□ -0.24
CHRNA1-203ENST00000409219 EIF4HQ15056 248 aaKnown RBP13.53□□□□□ -0.24
CHRNA1-203ENST00000409219 TMEM215Q68D42 235 aa13.53□□□□□ -0.24
CHRNA1-203ENST00000409219 SERPINA13PQ6UXR4 307 aa13.53□□□□□ -0.24
CHRNA1-203ENST00000409219 GPRIN1Q7Z2K8 1008 aa13.53□□□□□ -0.24
CHRNA1-203ENST00000409219 FMNL3Q8IVF7 1028 aa13.53□□□□□ -0.24
CHRNA1-203ENST00000409219 FAM181AQ8N9Y4 354 aa13.53□□□□□ -0.24
CHRNA1-203ENST00000409219 OR2T3Q8NH03 318 aa13.53□□□□□ -0.24
CHRNA1-203ENST00000409219 EPSTI1Q96J88 318 aa13.53□□□□□ -0.24
CHRNA1-203ENST00000409219 CIPCQ9C0C6 399 aa13.53□□□□□ -0.24
CHRNA1-203ENST00000409219 XYLT2Q9H1B5 865 aa13.53□□□□□ -0.24
CHRNA1-203ENST00000409219 FBXO44Q9H4M3 255 aa13.53□□□□□ -0.24
CHRNA1-203ENST00000409219 HSPBP1Q9NZL4 362 aa13.53□□□□□ -0.24
CHRNA1-203ENST00000409219 NXF1Q9UBU9 619 aaKnown RBP13.53□□□□□ -0.24
CHRNA1-203ENST00000409219 CLEC4EQ9ULY5 219 aa13.53□□□□□ -0.24
CHRNA1-203ENST00000409219 FRMD3A2A2Y4 597 aa13.52□□□□□ -0.25
CHRNA1-203ENST00000409219 CYP26A1O43174 497 aa13.52□□□□□ -0.25
CHRNA1-203ENST00000409219 DFNA5O60443 496 aa13.52□□□□□ -0.25
CHRNA1-203ENST00000409219 FSBPO95073 299 aa13.52□□□□□ -0.25
CHRNA1-203ENST00000409219 STAU1O95793 577 aaKnown RBP13.52□□□□□ -0.25
CHRNA1-203ENST00000409219 KLKB1P03952 638 aa13.52□□□□□ -0.25
CHRNA1-203ENST00000409219 C7P10643 843 aa13.52□□□□□ -0.25
CHRNA1-203ENST00000409219 CDK4P11802 303 aa13.52□□□□□ -0.25
CHRNA1-203ENST00000409219 CCDC130P13994 396 aa13.52□□□□□ -0.25
CHRNA1-203ENST00000409219 TNNI1P19237 187 aa13.52□□□□□ -0.25
CHRNA1-203ENST00000409219 MYL6P60660 151 aa13.52□□□□□ -0.25
CHRNA1-203ENST00000409219 KCNH2Q12809 1159 aa13.52□□□□□ -0.25
CHRNA1-203ENST00000409219 CAMK2GQ13555 558 aaPredicted RBP13.52□□□□□ -0.25
CHRNA1-203ENST00000409219 TBC1D25Q3MII6 688 aa13.52□□□□□ -0.25
CHRNA1-203ENST00000409219 PRAMEF14Q5SWL7 426 aa13.52□□□□□ -0.25
CHRNA1-203ENST00000409219 TSC1Q92574 1164 aa13.52□□□□□ -0.25
CHRNA1-203ENST00000409219 ELF4Q99607 663 aaPredicted RBP13.52□□□□□ -0.25
CHRNA1-203ENST00000409219 CGRRF1Q99675 332 aa13.52□□□□□ -0.25
CHRNA1-203ENST00000409219 BTBD1Q9H0C5 482 aa13.52□□□□□ -0.25
CHRNA1-203ENST00000409219 NMUR1Q9HB89 426 aa13.52□□□□□ -0.25
CHRNA1-203ENST00000409219 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.52□□□□□ -0.25
CHRNA1-203ENST00000409219 ARID1BQ8NFD5 2236 aaPredicted RBP13.51□□□□□ -0.25
CHRNA1-203ENST00000409219 B8ZZF3 427 aa13.51□□□□□ -0.25
CHRNA1-203ENST00000409219 IDEP14735 1019 aa13.51□□□□□ -0.25
CHRNA1-203ENST00000409219 ACTN2P35609 894 aa13.51□□□□□ -0.25
CHRNA1-203ENST00000409219 MAP3K7CLP57077 242 aa13.51□□□□□ -0.25
CHRNA1-203ENST00000409219 RHDQ02161 417 aa13.51□□□□□ -0.25
CHRNA1-203ENST00000409219 SHBQ15464 509 aa13.51□□□□□ -0.25
CHRNA1-203ENST00000409219 KLHDC10Q6PID8 442 aa13.51□□□□□ -0.25
CHRNA1-203ENST00000409219 LURAP1LQ8IV03 231 aa13.51□□□□□ -0.25
CHRNA1-203ENST00000409219 ZNF366Q8N895 744 aa13.51□□□□□ -0.25
CHRNA1-203ENST00000409219 SAP25Q8TEE9 199 aa13.51□□□□□ -0.25
CHRNA1-203ENST00000409219 WBP1Q96G27 269 aa13.51□□□□□ -0.25
CHRNA1-203ENST00000409219 TNIP3Q96KP6 325 aa13.51□□□□□ -0.25
CHRNA1-203ENST00000409219 LGMNQ99538 433 aa13.51□□□□□ -0.25
CHRNA1-203ENST00000409219 ACE2Q9BYF1 805 aaPredicted RBP13.51□□□□□ -0.25
CHRNA1-203ENST00000409219 GZF1Q9H116 711 aaPredicted RBP13.51□□□□□ -0.25
CHRNA1-203ENST00000409219 CSNK1G1Q9HCP0 422 aa13.51□□□□□ -0.25
CHRNA1-203ENST00000409219 KIF3AQ9Y496 699 aa13.51□□□□□ -0.25
CHRNA1-203ENST00000409219 A0A1W2PQH9 124 aa13.5□□□□□ -0.25
CHRNA1-203ENST00000409219 VILLO15195 856 aa13.5□□□□□ -0.25
CHRNA1-203ENST00000409219 EIF5BO60841 1220 aaKnown RBP13.5□□□□□ -0.25
CHRNA1-203ENST00000409219 IGHV4-34P06331 123 aa13.5□□□□□ -0.25
CHRNA1-203ENST00000409219 ITGAVP06756 1048 aa13.5□□□□□ -0.25
CHRNA1-203ENST00000409219 RARGP13631 454 aa13.5□□□□□ -0.25
CHRNA1-203ENST00000409219 ABCB4P21439 1286 aa13.5□□□□□ -0.25
CHRNA1-203ENST00000409219 PLA2G4AP47712 749 aa13.5□□□□□ -0.25
CHRNA1-203ENST00000409219 BCAT1P54687 386 aa13.5□□□□□ -0.25
CHRNA1-203ENST00000409219 C21orf59P57076 290 aa13.5□□□□□ -0.25
CHRNA1-203ENST00000409219 RACK1P63244 317 aaKnown RBP13.5□□□□□ -0.25
CHRNA1-203ENST00000409219 KCNC4Q03721 635 aa13.5□□□□□ -0.25
CHRNA1-203ENST00000409219 LY6DQ14210 128 aa13.5□□□□□ -0.25
CHRNA1-203ENST00000409219 SNRNP35Q16560 246 aaKnown RBP13.5□□□□□ -0.25
CHRNA1-203ENST00000409219 C10orf120Q5SQS8 335 aa13.5□□□□□ -0.25
CHRNA1-203ENST00000409219 SCARA5Q6ZMJ2 495 aa13.5□□□□□ -0.25
CHRNA1-203ENST00000409219 SV2BQ7L1I2 683 aa13.5□□□□□ -0.25
CHRNA1-203ENST00000409219 SLC2A14Q8TDB8 520 aa13.5□□□□□ -0.25
CHRNA1-203ENST00000409219 SLC6A18Q96N87 628 aa13.5□□□□□ -0.25
CHRNA1-203ENST00000409219 SDCBP2Q9H190 292 aa13.5□□□□□ -0.25
CHRNA1-203ENST00000409219 SCML2Q9UQR0 700 aa13.5□□□□□ -0.25
CHRNA1-203ENST00000409219 COL12A1Q99715 3063 aa13.5□□□□□ -0.25
CHRNA1-203ENST00000409219 HHLA1C9JL84 531 aa13.49□□□□□ -0.25
CHRNA1-203ENST00000409219 BMP15O95972 392 aa13.49□□□□□ -0.25
CHRNA1-203ENST00000409219 WNT1P04628 370 aa13.49□□□□□ -0.25
CHRNA1-203ENST00000409219 EPHA8P29322 1005 aaPredicted RBP13.49□□□□□ -0.25
CHRNA1-203ENST00000409219 HOXD13P35453 343 aa13.49□□□□□ -0.25
CHRNA1-203ENST00000409219 CHKAP35790 457 aa13.49□□□□□ -0.25
CHRNA1-203ENST00000409219 PSMD6Q15008 389 aa13.49□□□□□ -0.25
CHRNA1-203ENST00000409219 E2F5Q15329 346 aa13.49□□□□□ -0.25
CHRNA1-203ENST00000409219 PKDCCQ504Y2 493 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms