RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 KIF20AO95235 890 aa9.65□□□□□ -0.86
NIF3L1-203ENST00000409129 CFIP05156 583 aa9.65□□□□□ -0.86
NIF3L1-203ENST00000409129 CISD3P0C7P0 127 aa9.65□□□□□ -0.86
NIF3L1-203ENST00000409129 RARGP13631 454 aa9.65□□□□□ -0.86
NIF3L1-203ENST00000409129 PFKFB1P16118 471 aa9.65□□□□□ -0.86
NIF3L1-203ENST00000409129 GFPT1Q06210 699 aaPredicted RBP9.65□□□□□ -0.86
NIF3L1-203ENST00000409129 PKP1Q13835 747 aa9.65□□□□□ -0.86
NIF3L1-203ENST00000409129 EGFLAMQ63HQ2 1017 aa9.65□□□□□ -0.86
NIF3L1-203ENST00000409129 KLHDC10Q6PID8 442 aa9.65□□□□□ -0.86
NIF3L1-203ENST00000409129 TOGARAM2Q6ZUX3 1019 aa9.65□□□□□ -0.86
NIF3L1-203ENST00000409129 RAB44Q7Z6P3 723 aaPredicted RBP9.65□□□□□ -0.86
NIF3L1-203ENST00000409129 PIP4P1Q86T03 277 aa9.65□□□□□ -0.86
NIF3L1-203ENST00000409129 HSCBQ8IWL3 235 aa9.65□□□□□ -0.86
NIF3L1-203ENST00000409129 CHPFQ8IZ52 775 aa9.65□□□□□ -0.86
NIF3L1-203ENST00000409129 ZNF276Q8N554 614 aa9.65□□□□□ -0.86
NIF3L1-203ENST00000409129 PNPLA1Q8N8W4 532 aa9.65□□□□□ -0.86
NIF3L1-203ENST00000409129 OR2I1PQ8NGU4 316 aa9.65□□□□□ -0.86
NIF3L1-203ENST00000409129 IPO4Q8TEX9 1081 aaKnown RBP9.65□□□□□ -0.86
NIF3L1-203ENST00000409129 JAKMIP2Q96AA8 810 aa9.65□□□□□ -0.86
NIF3L1-203ENST00000409129 GABRG3Q99928 467 aa9.65□□□□□ -0.86
NIF3L1-203ENST00000409129 IMPG2Q9BZV3 1241 aa9.65□□□□□ -0.86
NIF3L1-203ENST00000409129 SLC32A1Q9H598 525 aa9.65□□□□□ -0.86
NIF3L1-203ENST00000409129 APOBEC3GQ9HC16 384 aaKnown RBP9.65□□□□□ -0.86
NIF3L1-203ENST00000409129 CD248Q9HCU0 757 aa9.65□□□□□ -0.86
NIF3L1-203ENST00000409129 PNPLA8Q9NP80 782 aa9.65□□□□□ -0.86
NIF3L1-203ENST00000409129 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.65□□□□□ -0.86
NIF3L1-203ENST00000409129 DNMT3LQ9UJW3 386 aa9.65□□□□□ -0.86
NIF3L1-203ENST00000409129 NUDT5Q9UKK9 219 aa9.65□□□□□ -0.86
NIF3L1-203ENST00000409129 PTPRQQ9UMZ3 2332 aa9.65□□□□□ -0.87
NIF3L1-203ENST00000409129 IGHV1OR15-9A0A0B4J2B8 117 aa9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 UPK3BL1B0FP48 263 aa9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 UPK3BL2E5RIL1 263 aa9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 GFRA2O00451 464 aa9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 MDM4O15151 490 aa9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 CILPO75339 1184 aa9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 SERPINF2P08697 491 aa9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 CD58P19256 250 aa9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 NDUFV2P19404 249 aa9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 NR2F2P24468 414 aa9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 GCLMP48507 274 aa9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 DGKGP49619 791 aa9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 KIF11P52732 1056 aa9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 ATXN3P54252 364 aaPredicted RBP9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 ZNF33AQ06730 810 aa9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 ENPEPQ07075 957 aa9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 PPP3CAQ08209 521 aa9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 C19orf57Q0VDD7 668 aa9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 SEMA3BQ13214 749 aa9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 NFIL3Q16649 462 aa9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 C10orf120Q5SQS8 335 aa9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 Q6ZNB5 142 aa9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 INTS8Q75QN2 995 aaKnown RBP9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 CCDC186Q7Z3E2 898 aa9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 RABEPKQ7Z6M1 372 aa9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 SCD5Q86SK9 330 aa9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 TADA2BQ86TJ2 420 aa9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 MARCH9Q86YJ5 346 aa9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 TAS1R2Q8TE23 839 aa9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 CCDC47Q96A33 483 aaKnown RBP9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 CAMK1GQ96NX5 476 aa9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 GTPBP2Q9BX10 602 aaKnown RBP9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 DUSP16Q9BY84 665 aa9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 DNAI2Q9GZS0 605 aa9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 CCDC86Q9H6F5 360 aaKnown RBP9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 CAPN10Q9HC96 672 aa9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 NAGPAQ9UK23 515 aa9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 FBXO10Q9UK96 956 aa9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 HPSEQ9Y251 543 aa9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 ZNF510Q9Y2H8 683 aa9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 USP3Q9Y6I4 520 aa9.64□□□□□ -0.87
NIF3L1-203ENST00000409129 ATMQ13315 3056 aa9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 WASH3PC4AMC7 463 aa9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 PYCARD-AS1I3L0S3 204 aa9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 STC2O76061 302 aa9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 RHOBTB3O94955 611 aa9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 KLKB1P03952 638 aa9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 TRIM49P0CI25 452 aa9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 TRIM49CP0CI26 452 aa9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 RALAP11233 206 aa9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 KRT13P13646 458 aa9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 RPL13P26373 211 aaKnown RBP9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 PSMC2P35998 433 aaKnown RBP9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 SYKP43405 635 aa9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 MCCD1P59942 119 aaPredicted RBP9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 COG7P83436 770 aa9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 ADAM9Q13443 819 aa9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 PPP1R26Q5T8A7 1209 aaPredicted RBP9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 SLC41A1Q8IVJ1 513 aa9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 FAM186BQ8IYM0 893 aa9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 HDDC3Q8N4P3 179 aa9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 TRIML1Q8N9V2 468 aa9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 CCDC150Q8NCX0 1101 aa9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 BHMTQ93088 406 aa9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 ERLEC1Q96DZ1 483 aa9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 ZNF419Q96HQ0 510 aaPredicted RBP9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 MRGPRX1Q96LB2 322 aa9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 HEXIM2Q96MH2 286 aaKnown RBP9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 CDK5RAP1Q96SZ6 601 aaKnown RBP9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 UBXN6Q9BZV1 441 aa9.63□□□□□ -0.87
NIF3L1-203ENST00000409129 NIF3L1Q9GZT8 377 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms