RNA–Protein interactions for RNA: ENST00000409096.5

CUL3-203, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 2,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-203ENST00000409096 REXO5Q96IC2 774 aaKnown RBP3.1□□□□□ -1.91
CUL3-203ENST00000409096 VPS50Q96JG6 964 aa3.1□□□□□ -1.91
CUL3-203ENST00000409096 PAAF1Q9BRP4 392 aa3.1□□□□□ -1.91
CUL3-203ENST00000409096 SERTAD4Q9NUC0 356 aa3.1□□□□□ -1.91
CUL3-203ENST00000409096 FBXO28Q9NVF7 368 aa3.1□□□□□ -1.91
CUL3-203ENST00000409096 PDP2Q9P2J9 529 aa3.1□□□□□ -1.91
CUL3-203ENST00000409096 GJD2Q9UKL4 321 aa3.1□□□□□ -1.91
CUL3-203ENST00000409096 AMFRQ9UKV5 643 aa3.1□□□□□ -1.91
CUL3-203ENST00000409096 COL4A3Q01955 1670 aa3.1□□□□□ -1.91
CUL3-203ENST00000409096 C1QTNF3-AMACRE9PGA6 284 aa3.1□□□□□ -1.91
CUL3-203ENST00000409096 KIAA0355O15063 1070 aa3.1□□□□□ -1.91
CUL3-203ENST00000409096 NXPH3O95157 252 aa3.1□□□□□ -1.91
CUL3-203ENST00000409096 HKR1P10072 659 aa3.1□□□□□ -1.91
CUL3-203ENST00000409096 INSRRP14616 1297 aa3.1□□□□□ -1.91
CUL3-203ENST00000409096 CD19P15391 556 aa3.1□□□□□ -1.91
CUL3-203ENST00000409096 GRIA3P42263 894 aa3.1□□□□□ -1.91
CUL3-203ENST00000409096 FOXL2P58012 376 aa3.1□□□□□ -1.91
CUL3-203ENST00000409096 RPL15P61313 204 aaKnown RBP3.1□□□□□ -1.91
CUL3-203ENST00000409096 SIM1P81133 766 aaPredicted RBP3.1□□□□□ -1.91
CUL3-203ENST00000409096 DNASE1L3Q13609 305 aa3.1□□□□□ -1.91
CUL3-203ENST00000409096 DGAT2L7PQ6IED9 249 aa3.1□□□□□ -1.91
CUL3-203ENST00000409096 PARS2Q7L3T8 475 aaKnown RBP3.1□□□□□ -1.91
CUL3-203ENST00000409096 TTC30AQ86WT1 665 aa3.1□□□□□ -1.91
CUL3-203ENST00000409096 Q8N1X5 172 aa3.1□□□□□ -1.91
CUL3-203ENST00000409096 SIRT6Q8N6T7 355 aa3.1□□□□□ -1.91
CUL3-203ENST00000409096 RSC1A1Q92681 617 aa3.1□□□□□ -1.91
CUL3-203ENST00000409096 USP13Q92995 863 aaPredicted RBP3.1□□□□□ -1.91
CUL3-203ENST00000409096 MAELQ96JY0 434 aaKnown RBP3.1□□□□□ -1.91
CUL3-203ENST00000409096 PRDM16Q9HAZ2 1276 aa3.1□□□□□ -1.91
CUL3-203ENST00000409096 CYP4F11Q9HBI6 524 aa3.1□□□□□ -1.91
CUL3-203ENST00000409096 ADAM21Q9UKJ8 722 aa3.1□□□□□ -1.91
CUL3-203ENST00000409096 ADAMTS5Q9UNA0 930 aa3.1□□□□□ -1.91
CUL3-203ENST00000409096 MATN3O15232 486 aa3.09□□□□□ -1.91
CUL3-203ENST00000409096 TTLL1O95922 423 aa3.09□□□□□ -1.91
CUL3-203ENST00000409096 PEX11BO96011 259 aa3.09□□□□□ -1.91
CUL3-203ENST00000409096 TMIGD3P0DMS9 266 aaPredicted RBP3.09□□□□□ -1.91
CUL3-203ENST00000409096 LYL1P12980 280 aa3.09□□□□□ -1.91
CUL3-203ENST00000409096 DRD4P21917 467 aa3.09□□□□□ -1.91
CUL3-203ENST00000409096 TGM1P22735 817 aa3.09□□□□□ -1.91
CUL3-203ENST00000409096 ADRA1DP25100 572 aa3.09□□□□□ -1.91
CUL3-203ENST00000409096 IGHMBP2P38935 993 aaKnown RBP3.09□□□□□ -1.91
CUL3-203ENST00000409096 LIFRP42702 1097 aa3.09□□□□□ -1.91
CUL3-203ENST00000409096 RBM5P52756 815 aaKnown RBP eCLIP3.09□□□□□ -1.91
CUL3-203ENST00000409096 COPB1P53618 953 aaKnown RBP3.09□□□□□ -1.91
CUL3-203ENST00000409096 EEFSECP57772 596 aaKnown RBP3.09□□□□□ -1.91
CUL3-203ENST00000409096 TAS2R50P59544 299 aa3.09□□□□□ -1.91
CUL3-203ENST00000409096 ACTR2P61160 394 aa3.09□□□□□ -1.91
CUL3-203ENST00000409096 MRPS35P82673 323 aaKnown RBP3.09□□□□□ -1.91
CUL3-203ENST00000409096 TDGQ13569 410 aa3.09□□□□□ -1.91
CUL3-203ENST00000409096 RALBP1Q15311 655 aa3.09□□□□□ -1.91
CUL3-203ENST00000409096 USP51Q70EK9 711 aa3.09□□□□□ -1.91
CUL3-203ENST00000409096 ZNF551Q7Z340 670 aaPredicted RBP3.09□□□□□ -1.91
CUL3-203ENST00000409096 RASAL3Q86YV0 1011 aa3.09□□□□□ -1.91
CUL3-203ENST00000409096 HTRA1Q92743 480 aa3.09□□□□□ -1.91
CUL3-203ENST00000409096 TWNKQ96RR1 684 aa3.09□□□□□ -1.91
CUL3-203ENST00000409096 NAP1L4Q99733 375 aaKnown RBP3.09□□□□□ -1.91
CUL3-203ENST00000409096 FSD1LQ9BXM9 530 aa3.09□□□□□ -1.91
CUL3-203ENST00000409096 ZCWPW1Q9H0M4 648 aa3.09□□□□□ -1.91
CUL3-203ENST00000409096 KCNK9Q9NPC2 374 aa3.09□□□□□ -1.91
CUL3-203ENST00000409096 LIN7CQ9NUP9 197 aaKnown RBP3.09□□□□□ -1.91
CUL3-203ENST00000409096 FOXJ2Q9P0K8 574 aa3.09□□□□□ -1.91
CUL3-203ENST00000409096 SLC12A4Q9UP95 1085 aa3.09□□□□□ -1.91
CUL3-203ENST00000409096 SH2B3Q9UQQ2 575 aa3.09□□□□□ -1.91
CUL3-203ENST00000409096 UBE2J1Q9Y385 318 aaPredicted RBP3.09□□□□□ -1.91
CUL3-203ENST00000409096 A0A1B0GVC2 190 aa3.09□□□□□ -1.92
CUL3-203ENST00000409096 C16orf96A6NNT2 1141 aa3.09□□□□□ -1.92
CUL3-203ENST00000409096 TMPRSS11DO60235 418 aa3.09□□□□□ -1.92
CUL3-203ENST00000409096 EXOC3O60645 756 aa3.09□□□□□ -1.92
CUL3-203ENST00000409096 ONECUT2O95948 504 aa3.09□□□□□ -1.92
CUL3-203ENST00000409096 CYP2D6P10635 497 aa3.09□□□□□ -1.92
CUL3-203ENST00000409096 NDUFB7P17568 137 aa3.09□□□□□ -1.92
CUL3-203ENST00000409096 MAKP20794 623 aa3.09□□□□□ -1.92
CUL3-203ENST00000409096 TNFAIP3P21580 790 aa3.09□□□□□ -1.92
CUL3-203ENST00000409096 AARSP49588 968 aaKnown RBP eCLIP3.09□□□□□ -1.92
CUL3-203ENST00000409096 CCT8P50990 548 aa3.09□□□□□ -1.92
CUL3-203ENST00000409096 POLE2P56282 527 aa3.09□□□□□ -1.92
CUL3-203ENST00000409096 G3BP1Q13283 466 aaKnown RBP eCLIP3.09□□□□□ -1.92
CUL3-203ENST00000409096 MPP3Q13368 585 aa3.09□□□□□ -1.92
CUL3-203ENST00000409096 SIM2Q14190 667 aaPredicted RBP3.09□□□□□ -1.92
CUL3-203ENST00000409096 FAM187BQ17R55 369 aa3.09□□□□□ -1.92
CUL3-203ENST00000409096 LCE3BQ5TA77 95 aa3.09□□□□□ -1.92
CUL3-203ENST00000409096 ACSM6Q6P461 480 aa3.09□□□□□ -1.92
CUL3-203ENST00000409096 TMEM57Q8N5G2 664 aa3.09□□□□□ -1.92
CUL3-203ENST00000409096 PNPLA1Q8N8W4 532 aa3.09□□□□□ -1.92
CUL3-203ENST00000409096 RP9Q8TA86 221 aaKnown RBP3.09□□□□□ -1.92
CUL3-203ENST00000409096 EDC3Q96F86 508 aaKnown RBP3.09□□□□□ -1.92
CUL3-203ENST00000409096 RBM17Q96I25 401 aaKnown RBP3.09□□□□□ -1.92
CUL3-203ENST00000409096 CLPBQ9H078 707 aa3.09□□□□□ -1.92
CUL3-203ENST00000409096 TMEM160Q9NX00 188 aa3.09□□□□□ -1.92
CUL3-203ENST00000409096 LRIT1Q9P2V4 623 aa3.09□□□□□ -1.92
CUL3-203ENST00000409096 FYB1O15117 783 aa3.08□□□□□ -1.92
CUL3-203ENST00000409096 RHOBTB3O94955 611 aa3.08□□□□□ -1.92
CUL3-203ENST00000409096 ESRRBO95718 433 aa3.08□□□□□ -1.92
CUL3-203ENST00000409096 NPSP0C0P6 89 aa3.08□□□□□ -1.92
CUL3-203ENST00000409096 ACP5P13686 325 aa3.08□□□□□ -1.92
CUL3-203ENST00000409096 APEHP13798 732 aaKnown RBP3.08□□□□□ -1.92
CUL3-203ENST00000409096 CPA1P15085 419 aa3.08□□□□□ -1.92
CUL3-203ENST00000409096 PTH2RP49190 550 aa3.08□□□□□ -1.92
CUL3-203ENST00000409096 PAPOLAP51003 745 aaKnown RBP3.08□□□□□ -1.92
CUL3-203ENST00000409096 UBE3AQ05086 875 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms