RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 DCUN1D1Q96GG9 259 aa18.14■□□□□ 0.49
SMPD4-202ENST00000409031 AGBL1Q96MI9 1066 aa18.14■□□□□ 0.49
SMPD4-202ENST00000409031 TRIM54Q9BYV2 358 aa18.14■□□□□ 0.49
SMPD4-202ENST00000409031 A0A096LPK6 155 aa18.14■□□□□ 0.49
SMPD4-202ENST00000409031 SUPT3HB4E1H0 165 aa18.14■□□□□ 0.49
SMPD4-202ENST00000409031 LSM1O15116 133 aaKnown RBP18.14■□□□□ 0.49
SMPD4-202ENST00000409031 SNAP91O60641 907 aa18.14■□□□□ 0.49
SMPD4-202ENST00000409031 IL18RAPO95256 599 aa18.14■□□□□ 0.49
SMPD4-202ENST00000409031 C4BPBP20851 252 aa18.14■□□□□ 0.49
SMPD4-202ENST00000409031 DLG4P78352 724 aa18.14■□□□□ 0.49
SMPD4-202ENST00000409031 ZNF846Q147U1 533 aa18.14■□□□□ 0.49
SMPD4-202ENST00000409031 CYP51A1Q16850 503 aa18.14■□□□□ 0.49
SMPD4-202ENST00000409031 FAM196AQ6ZSG2 479 aa18.14■□□□□ 0.49
SMPD4-202ENST00000409031 ACMSDQ8TDX5 336 aa18.14■□□□□ 0.49
SMPD4-202ENST00000409031 TRIM38O00635 465 aa18.14■□□□□ 0.49
SMPD4-202ENST00000409031 TOMM70O94826 608 aa18.14■□□□□ 0.49
SMPD4-202ENST00000409031 SLC12A3P55017 1021 aa18.14■□□□□ 0.49
SMPD4-202ENST00000409031 UBAP2LQ14157 1087 aaKnown RBP18.14■□□□□ 0.49
SMPD4-202ENST00000409031 MXD4Q14582 209 aaPredicted RBP18.14■□□□□ 0.49
SMPD4-202ENST00000409031 TJAP1Q5JTD0 557 aa18.14■□□□□ 0.49
SMPD4-202ENST00000409031 KBTBD2Q8IY47 623 aa18.14■□□□□ 0.49
SMPD4-202ENST00000409031 PWWP2AQ96N64 755 aa18.14■□□□□ 0.49
SMPD4-202ENST00000409031 USE1Q9NZ43 259 aa18.14■□□□□ 0.49
SMPD4-202ENST00000409031 DNAJB4Q9UDY4 337 aa18.14■□□□□ 0.49
SMPD4-202ENST00000409031 TUBGCP4Q9UGJ1 667 aa18.14■□□□□ 0.49
SMPD4-202ENST00000409031 ITGA11Q9UKX5 1188 aa18.14■□□□□ 0.49
SMPD4-202ENST00000409031 SESN1Q9Y6P5 492 aa18.14■□□□□ 0.49
SMPD4-202ENST00000409031 CD163L1Q9NR16 1453 aa18.14■□□□□ 0.49
SMPD4-202ENST00000409031 POLRMTO00411 1230 aaKnown RBP18.14■□□□□ 0.49
SMPD4-202ENST00000409031 GPR107Q5VW38 600 aa18.14■□□□□ 0.49
SMPD4-202ENST00000409031 STK32CQ86UX6 486 aa18.14■□□□□ 0.49
SMPD4-202ENST00000409031 OR7A2PQ8NGA2 310 aa18.14■□□□□ 0.49
SMPD4-202ENST00000409031 COMMD8Q9NX08 183 aa18.14■□□□□ 0.49
SMPD4-202ENST00000409031 LINC00854A0A1B0GVQ3 168 aa18.13■□□□□ 0.49
SMPD4-202ENST00000409031 RPL14P50914 215 aaKnown RBP18.13■□□□□ 0.49
SMPD4-202ENST00000409031 TRAF3Q13114 568 aa18.13■□□□□ 0.49
SMPD4-202ENST00000409031 SLC1A5Q15758 541 aa18.13■□□□□ 0.49
SMPD4-202ENST00000409031 ATPAF2Q8N5M1 289 aa18.13■□□□□ 0.49
SMPD4-202ENST00000409031 UBA3Q8TBC4 463 aa18.13■□□□□ 0.49
SMPD4-202ENST00000409031 C17orf50Q8WW18 174 aa18.13■□□□□ 0.49
SMPD4-202ENST00000409031 MCRS1Q96EZ8 462 aa18.13■□□□□ 0.49
SMPD4-202ENST00000409031 ZNF560Q96MR9 790 aa18.13■□□□□ 0.49
SMPD4-202ENST00000409031 KCTD10Q9H3F6 313 aa18.13■□□□□ 0.49
SMPD4-202ENST00000409031 CHST12Q9NRB3 414 aa18.13■□□□□ 0.49
SMPD4-202ENST00000409031 RARBP10826 455 aa18.13■□□□□ 0.49
SMPD4-202ENST00000409031 ALOX12P18054 663 aa18.13■□□□□ 0.49
SMPD4-202ENST00000409031 TAF5Q15542 800 aa18.13■□□□□ 0.49
SMPD4-202ENST00000409031 PACS1Q6VY07 963 aa18.13■□□□□ 0.49
SMPD4-202ENST00000409031 ZNF606Q8WXB4 792 aa18.13■□□□□ 0.49
SMPD4-202ENST00000409031 SEPHS2Q99611 448 aa18.13■□□□□ 0.49
SMPD4-202ENST00000409031 APOL4Q9BPW4 351 aa18.13■□□□□ 0.49
SMPD4-202ENST00000409031 C6orf62Q9GZU0 229 aaPredicted RBP18.13■□□□□ 0.49
SMPD4-202ENST00000409031 WDR37Q9Y2I8 494 aa18.13■□□□□ 0.49
SMPD4-202ENST00000409031 NEURL4Q96JN8 1562 aa18.13■□□□□ 0.49
SMPD4-202ENST00000409031 ANXA9O76027 345 aa18.13■□□□□ 0.49
SMPD4-202ENST00000409031 ZNF12P17014 697 aa18.13■□□□□ 0.49
SMPD4-202ENST00000409031 GLRA2P23416 452 aa18.13■□□□□ 0.49
SMPD4-202ENST00000409031 TTC23Q5W5X9 447 aa18.13■□□□□ 0.49
SMPD4-202ENST00000409031 KDELC2Q7Z4H8 507 aa18.13■□□□□ 0.49
SMPD4-202ENST00000409031 RSPH1Q8WYR4 309 aa18.13■□□□□ 0.49
SMPD4-202ENST00000409031 SEPT8Q92599 483 aa18.13■□□□□ 0.49
SMPD4-202ENST00000409031 OSBPL6Q9BZF3 934 aa18.13■□□□□ 0.49
SMPD4-202ENST00000409031 GPBP1L1Q9HC44 474 aaPredicted RBP18.13■□□□□ 0.49
SMPD4-202ENST00000409031 IARS2Q9NSE4 1012 aaKnown RBP18.13■□□□□ 0.49
SMPD4-202ENST00000409031 FBXO40Q9UH90 709 aa18.13■□□□□ 0.49
SMPD4-202ENST00000409031 SLC8A2Q9UPR5 921 aa18.13■□□□□ 0.49
SMPD4-202ENST00000409031 NDUFAF1Q9Y375 327 aa18.13■□□□□ 0.49
SMPD4-202ENST00000409031 SNX9Q9Y5X1 595 aa18.13■□□□□ 0.49
SMPD4-202ENST00000409031 EME2A4GXA9 379 aaPredicted RBP18.12■□□□□ 0.49
SMPD4-202ENST00000409031 ACSBG2Q5FVE4 666 aa18.12■□□□□ 0.49
SMPD4-202ENST00000409031 SNRNP48Q6IEG0 339 aaKnown RBP18.12■□□□□ 0.49
SMPD4-202ENST00000409031 IPMKQ8NFU5 416 aa18.12■□□□□ 0.49
SMPD4-202ENST00000409031 CPNE1Q99829 537 aa18.12■□□□□ 0.49
SMPD4-202ENST00000409031 SPATA31A3Q5VYP0 1347 aa18.12■□□□□ 0.49
SMPD4-202ENST00000409031 MAGEB16A2A368 324 aa18.12■□□□□ 0.49
SMPD4-202ENST00000409031 FAM25AB3EWG3 89 aa18.12■□□□□ 0.49
SMPD4-202ENST00000409031 FAM25CB3EWG5 89 aa18.12■□□□□ 0.49
SMPD4-202ENST00000409031 FAM25GB3EWG6 89 aa18.12■□□□□ 0.49
SMPD4-202ENST00000409031 MAFGO15525 162 aa18.12■□□□□ 0.49
SMPD4-202ENST00000409031 SOAT2O75908 522 aa18.12■□□□□ 0.49
SMPD4-202ENST00000409031 ITGAVP06756 1048 aa18.12■□□□□ 0.49
SMPD4-202ENST00000409031 NPTX2P47972 431 aa18.12■□□□□ 0.49
SMPD4-202ENST00000409031 ADGRA1Q86SQ6 560 aa18.12■□□□□ 0.49
SMPD4-202ENST00000409031 SLC22A9Q8IVM8 553 aa18.12■□□□□ 0.49
SMPD4-202ENST00000409031 USP33Q8TEY7 942 aa18.12■□□□□ 0.49
SMPD4-202ENST00000409031 RAD51BO15315 384 aa18.12■□□□□ 0.49
SMPD4-202ENST00000409031 CHADO15335 359 aa18.12■□□□□ 0.49
SMPD4-202ENST00000409031 ASMTLO95671 621 aa18.12■□□□□ 0.49
SMPD4-202ENST00000409031 CCNB1P14635 433 aa18.12■□□□□ 0.49
SMPD4-202ENST00000409031 FGFR3P22607 806 aa18.12■□□□□ 0.49
SMPD4-202ENST00000409031 SCNN1BP51168 640 aa18.12■□□□□ 0.49
SMPD4-202ENST00000409031 TOP3AQ13472 1001 aaPredicted RBP18.12■□□□□ 0.49
SMPD4-202ENST00000409031 C16orf46Q6P387 395 aa18.12■□□□□ 0.49
SMPD4-202ENST00000409031 MTG1Q9BT17 334 aaPredicted RBP18.12■□□□□ 0.49
SMPD4-202ENST00000409031 WDR12Q9GZL7 423 aaKnown RBP18.12■□□□□ 0.49
SMPD4-202ENST00000409031 VPS45Q9NRW7 570 aa18.12■□□□□ 0.49
SMPD4-202ENST00000409031 LNPEPQ9UIQ6 1025 aa18.12■□□□□ 0.49
SMPD4-202ENST00000409031 KIAA1257Q9ULG3 409 aa18.12■□□□□ 0.49
SMPD4-202ENST00000409031 FRMPD4Q14CM0 1322 aa18.12■□□□□ 0.49
SMPD4-202ENST00000409031 IDH3BO43837 385 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms