RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 DCDC2CA8MYV0 355 aa19.64■□□□□ 0.73
USP39-202ENST00000409025 EEF2KO00418 725 aaKnown RBP19.64■□□□□ 0.73
USP39-202ENST00000409025 EIF3HO15372 352 aaKnown RBP eCLIP19.64■□□□□ 0.73
USP39-202ENST00000409025 CREB3O43889 395 aa19.64■□□□□ 0.73
USP39-202ENST00000409025 TCEA3O75764 348 aa19.64■□□□□ 0.73
USP39-202ENST00000409025 IRAK1P51617 712 aa19.64■□□□□ 0.73
USP39-202ENST00000409025 STAT4Q14765 748 aa19.64■□□□□ 0.73
USP39-202ENST00000409025 C4orf22Q6V702 233 aa19.64■□□□□ 0.73
USP39-202ENST00000409025 BEND5Q7L4P6 421 aa19.64■□□□□ 0.73
USP39-202ENST00000409025 ZBED8Q8IZ13 594 aa19.64■□□□□ 0.73
USP39-202ENST00000409025 A0A087WUV0 522 aaPredicted RBP19.63■□□□□ 0.73
USP39-202ENST00000409025 ALDH2P05091 517 aa19.63■□□□□ 0.73
USP39-202ENST00000409025 NFE2Q16621 373 aaPredicted RBP19.63■□□□□ 0.73
USP39-202ENST00000409025 VARS2Q5ST30 1063 aaKnown RBP19.63■□□□□ 0.73
USP39-202ENST00000409025 KCNT2Q6UVM3 1135 aa19.63■□□□□ 0.73
USP39-202ENST00000409025 SCAMP5Q8TAC9 235 aa19.63■□□□□ 0.73
USP39-202ENST00000409025 QKIQ96PU8 341 aaKnown RBP eCLIP19.63■□□□□ 0.73
USP39-202ENST00000409025 ETNK2Q9NVF9 386 aa19.63■□□□□ 0.73
USP39-202ENST00000409025 DTLQ9NZJ0 730 aa19.63■□□□□ 0.73
USP39-202ENST00000409025 ERICH4A6NGS2 130 aa19.63■□□□□ 0.73
USP39-202ENST00000409025 HACD1B0YJ81 288 aa19.63■□□□□ 0.73
USP39-202ENST00000409025 CHADO15335 359 aa19.63■□□□□ 0.73
USP39-202ENST00000409025 MDH1P40925 334 aaKnown RBP19.63■□□□□ 0.73
USP39-202ENST00000409025 GATMP50440 423 aa19.63■□□□□ 0.73
USP39-202ENST00000409025 SLC5A3P53794 718 aa19.63■□□□□ 0.73
USP39-202ENST00000409025 ATN1P54259 1190 aaPredicted RBP19.63■□□□□ 0.73
USP39-202ENST00000409025 TTC19Q6DKK2 380 aaPredicted RBP19.63■□□□□ 0.73
USP39-202ENST00000409025 RFX8Q6ZV50 586 aa19.63■□□□□ 0.73
USP39-202ENST00000409025 NPAS4Q8IUM7 802 aa19.63■□□□□ 0.73
USP39-202ENST00000409025 SCN4BQ8IWT1 228 aa19.63■□□□□ 0.73
USP39-202ENST00000409025 SCLYQ96I15 445 aa19.63■□□□□ 0.73
USP39-202ENST00000409025 FUBP3Q96I24 572 aaKnown RBP eCLIP19.63■□□□□ 0.73
USP39-202ENST00000409025 HIPK3Q9H422 1215 aa19.63■□□□□ 0.73
USP39-202ENST00000409025 WDCPQ9H6R7 721 aa19.63■□□□□ 0.73
USP39-202ENST00000409025 ABI2Q9NYB9 513 aaPredicted RBP19.63■□□□□ 0.73
USP39-202ENST00000409025 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.63■□□□□ 0.73
USP39-202ENST00000409025 TCRBV7S3A2A0A539 114 aa19.62■□□□□ 0.73
USP39-202ENST00000409025 TMEM63AO94886 807 aa19.62■□□□□ 0.73
USP39-202ENST00000409025 PARNO95453 639 aaKnown RBP19.62■□□□□ 0.73
USP39-202ENST00000409025 ATP5DP30049 168 aa19.62■□□□□ 0.73
USP39-202ENST00000409025 CXCR3P49682 368 aa19.62■□□□□ 0.73
USP39-202ENST00000409025 IFI35P80217 286 aaPredicted RBP19.62■□□□□ 0.73
USP39-202ENST00000409025 IFRD2Q12894 506 aaPredicted RBP19.62■□□□□ 0.73
USP39-202ENST00000409025 FASTKD3Q14CZ7 662 aaKnown RBP19.62■□□□□ 0.73
USP39-202ENST00000409025 TCTN1Q2MV58 587 aa19.62■□□□□ 0.73
USP39-202ENST00000409025 CTXN3Q4LDR2 81 aa19.62■□□□□ 0.73
USP39-202ENST00000409025 TNFAIP8L3Q5GJ75 292 aa19.62■□□□□ 0.73
USP39-202ENST00000409025 HP1BP3Q5SSJ5 553 aaPredicted RBP19.62■□□□□ 0.73
USP39-202ENST00000409025 FAM171A1Q5VUB5 890 aa19.62■□□□□ 0.73
USP39-202ENST00000409025 PPP1R21Q6ZMI0 780 aa19.62■□□□□ 0.73
USP39-202ENST00000409025 CEP57Q86XR8 500 aa19.62■□□□□ 0.73
USP39-202ENST00000409025 PDIK1LQ8N165 341 aa19.62■□□□□ 0.73
USP39-202ENST00000409025 TFB1MQ8WVM0 346 aaKnown RBP19.62■□□□□ 0.73
USP39-202ENST00000409025 MRPL9Q9BYD2 267 aaKnown RBP19.62■□□□□ 0.73
USP39-202ENST00000409025 KLC2Q9H0B6 622 aa19.62■□□□□ 0.73
USP39-202ENST00000409025 CNOT10Q9H9A5 744 aaKnown RBP19.62■□□□□ 0.73
USP39-202ENST00000409025 RAB6BQ9NRW1 208 aa19.62■□□□□ 0.73
USP39-202ENST00000409025 MFHAS1Q9Y4C4 1052 aa19.62■□□□□ 0.73
USP39-202ENST00000409025 SF3B1O75533 1304 aaKnown RBP eCLIP19.62■□□□□ 0.733e-9■■■■■ 206.8
USP39-202ENST00000409025 COL4A4P53420 1690 aaPredicted RBP19.61■□□□□ 0.73
USP39-202ENST00000409025 TNFRSF10BO14763 440 aa19.61■□□□□ 0.73
USP39-202ENST00000409025 DGKIO75912 1065 aa19.61■□□□□ 0.73
USP39-202ENST00000409025 YWHAGP61981 247 aaKnown RBP eCLIP19.61■□□□□ 0.73
USP39-202ENST00000409025 GUCY1A3Q02108 690 aa19.61■□□□□ 0.73
USP39-202ENST00000409025 GAD2Q05329 585 aa19.61■□□□□ 0.73
USP39-202ENST00000409025 DPYSQ14117 519 aa19.61■□□□□ 0.73
USP39-202ENST00000409025 KCNJ11Q14654 390 aa19.61■□□□□ 0.73
USP39-202ENST00000409025 FNBP1LQ5T0N5 605 aa19.61■□□□□ 0.73
USP39-202ENST00000409025 BTBD8Q5XKL5 378 aa19.61■□□□□ 0.73
USP39-202ENST00000409025 HEATR6Q6AI08 1181 aaKnown RBP19.61■□□□□ 0.73
USP39-202ENST00000409025 SLC39A5Q6ZMH5 540 aa19.61■□□□□ 0.73
USP39-202ENST00000409025 ANKRD33Q7Z3H0 272 aa19.61■□□□□ 0.73
USP39-202ENST00000409025 TAC4Q86UU9 113 aa19.61■□□□□ 0.73
USP39-202ENST00000409025 OLFM3Q96PB7 478 aa19.61■□□□□ 0.73
USP39-202ENST00000409025 VPS37BQ9H9H4 285 aa19.61■□□□□ 0.73
USP39-202ENST00000409025 ABCC13Q9NSE7 274 aa19.61■□□□□ 0.73
USP39-202ENST00000409025 TANC1Q9C0D5 1861 aa19.61■□□□□ 0.73
USP39-202ENST00000409025 E7ESA3 106 aa19.61■□□□□ 0.73
USP39-202ENST00000409025 MFSD11O43934 449 aa19.61■□□□□ 0.73
USP39-202ENST00000409025 GCATO75600 419 aa19.61■□□□□ 0.73
USP39-202ENST00000409025 HCAR3P49019 387 aa19.61■□□□□ 0.73
USP39-202ENST00000409025 SLC11A1P49279 550 aa19.61■□□□□ 0.73
USP39-202ENST00000409025 ZNF135P52742 658 aaPredicted RBP19.61■□□□□ 0.73
USP39-202ENST00000409025 CCL23P55773 120 aa19.61■□□□□ 0.73
USP39-202ENST00000409025 TPI1P60174 286 aa19.61■□□□□ 0.73
USP39-202ENST00000409025 PAFAH1B3Q15102 231 aaKnown RBP19.61■□□□□ 0.73
USP39-202ENST00000409025 ZNF280DQ6N043 979 aa19.61■□□□□ 0.73
USP39-202ENST00000409025 VSTM1Q6UX27 236 aa19.61■□□□□ 0.73
USP39-202ENST00000409025 TAOK1Q7L7X3 1001 aa19.61■□□□□ 0.73
USP39-202ENST00000409025 CCDC13Q8IYE1 715 aa19.61■□□□□ 0.73
USP39-202ENST00000409025 DQX1Q8TE96 717 aaKnown RBP19.61■□□□□ 0.73
USP39-202ENST00000409025 PYROXD1Q8WU10 500 aa19.61■□□□□ 0.73
USP39-202ENST00000409025 LRRN4Q8WUT4 740 aa19.61■□□□□ 0.73
USP39-202ENST00000409025 ANLNQ9NQW6 1124 aa19.61■□□□□ 0.73
USP39-202ENST00000409025 SLC12A6Q9UHW9 1150 aa19.61■□□□□ 0.73
USP39-202ENST00000409025 PCDHB5Q9Y5E4 795 aa19.61■□□□□ 0.73
USP39-202ENST00000409025 TTC3P53804 2025 aa19.6■□□□□ 0.73
USP39-202ENST00000409025 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.6■□□□□ 0.73
USP39-202ENST00000409025 C5orf60A6NFR6 353 aa19.6■□□□□ 0.73
USP39-202ENST00000409025 OR6C75A6NL08 312 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms