RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 LONP2Q86WA8 852 aa10.15□□□□□ -0.78
NIF3L1-202ENST00000409020 BBS7Q8IWZ6 715 aa10.15□□□□□ -0.78
NIF3L1-202ENST00000409020 SYNPOQ8N3V7 929 aa10.15□□□□□ -0.78
NIF3L1-202ENST00000409020 PDZD8Q8NEN9 1154 aa10.15□□□□□ -0.78
NIF3L1-202ENST00000409020 N4BP2L2Q92802 583 aaPredicted RBP10.15□□□□□ -0.78
NIF3L1-202ENST00000409020 KAT5Q92993 513 aa10.15□□□□□ -0.78
NIF3L1-202ENST00000409020 RMDN1Q96DB5 314 aa10.15□□□□□ -0.78
NIF3L1-202ENST00000409020 HEXIM2Q96MH2 286 aaKnown RBP10.15□□□□□ -0.78
NIF3L1-202ENST00000409020 TSG101Q99816 390 aa10.15□□□□□ -0.78
NIF3L1-202ENST00000409020 NCDNQ9UBB6 729 aa10.15□□□□□ -0.78
NIF3L1-202ENST00000409020 CTNND2Q9UQB3 1225 aa10.15□□□□□ -0.78
NIF3L1-202ENST00000409020 CHUKO15111 745 aa10.15□□□□□ -0.79
NIF3L1-202ENST00000409020 HNRNPLP14866 589 aaKnown RBP eCLIP10.15□□□□□ -0.79
NIF3L1-202ENST00000409020 TPP2P29144 1249 aaPredicted RBP10.15□□□□□ -0.79
NIF3L1-202ENST00000409020 FLT3P36888 993 aa10.15□□□□□ -0.79
NIF3L1-202ENST00000409020 NRLP54845 237 aa10.15□□□□□ -0.79
NIF3L1-202ENST00000409020 SESN3P58005 492 aa10.15□□□□□ -0.79
NIF3L1-202ENST00000409020 LRRC63Q05C16 580 aa10.15□□□□□ -0.79
NIF3L1-202ENST00000409020 KDSRQ06136 332 aa10.15□□□□□ -0.79
NIF3L1-202ENST00000409020 CUL2Q13617 745 aa10.15□□□□□ -0.79
NIF3L1-202ENST00000409020 PPP2R5DQ14738 602 aa10.15□□□□□ -0.79
NIF3L1-202ENST00000409020 C2orf27AQ580R0 203 aa10.15□□□□□ -0.79
NIF3L1-202ENST00000409020 LY6G5CQ5SRR4 150 aa10.15□□□□□ -0.79
NIF3L1-202ENST00000409020 TTC30AQ86WT1 665 aa10.15□□□□□ -0.79
NIF3L1-202ENST00000409020 TMEM25Q86YD3 366 aa10.15□□□□□ -0.79
NIF3L1-202ENST00000409020 REXO1L1PQ8IX06 675 aa10.15□□□□□ -0.79
NIF3L1-202ENST00000409020 NAT16Q8N8M0 369 aa10.15□□□□□ -0.79
NIF3L1-202ENST00000409020 NDRG1Q92597 394 aaKnown RBP10.15□□□□□ -0.79
NIF3L1-202ENST00000409020 TMEM176AQ96HP8 235 aa10.15□□□□□ -0.79
NIF3L1-202ENST00000409020 SRRTQ9BXP5 876 aaKnown RBP10.15□□□□□ -0.79
NIF3L1-202ENST00000409020 BATF3Q9NR55 127 aa10.15□□□□□ -0.79
NIF3L1-202ENST00000409020 ARMCX3Q9UH62 379 aaPredicted RBP10.15□□□□□ -0.79
NIF3L1-202ENST00000409020 SCML2Q9UQR0 700 aa10.15□□□□□ -0.79
NIF3L1-202ENST00000409020 COQ4Q9Y3A0 265 aa10.15□□□□□ -0.79
NIF3L1-202ENST00000409020 MYO16Q9Y6X6 1858 aa10.15□□□□□ -0.79
NIF3L1-202ENST00000409020 CEP295Q9C0D2 2601 aa10.14□□□□□ -0.79
NIF3L1-202ENST00000409020 MYOFQ9NZM1 2061 aa10.14□□□□□ -0.79
NIF3L1-202ENST00000409020 PDLIM1O00151 329 aa10.14□□□□□ -0.79
NIF3L1-202ENST00000409020 ERLIN1O75477 346 aa10.14□□□□□ -0.79
NIF3L1-202ENST00000409020 TUBP50607 506 aa10.14□□□□□ -0.79
NIF3L1-202ENST00000409020 KIF11P52732 1056 aa10.14□□□□□ -0.79
NIF3L1-202ENST00000409020 SIM2Q14190 667 aaPredicted RBP10.14□□□□□ -0.79
NIF3L1-202ENST00000409020 IQCB1Q15051 598 aa10.14□□□□□ -0.79
NIF3L1-202ENST00000409020 CAMK4Q16566 473 aa10.14□□□□□ -0.79
NIF3L1-202ENST00000409020 WLSQ5T9L3 541 aa10.14□□□□□ -0.79
NIF3L1-202ENST00000409020 EMC10Q5UCC4 262 aa10.14□□□□□ -0.79
NIF3L1-202ENST00000409020 UBR7Q8N806 425 aa10.14□□□□□ -0.79
NIF3L1-202ENST00000409020 CCDC150Q8NCX0 1101 aa10.14□□□□□ -0.79
NIF3L1-202ENST00000409020 NELFBQ8WX92 580 aa10.14□□□□□ -0.79
NIF3L1-202ENST00000409020 BHMTQ93088 406 aa10.14□□□□□ -0.79
NIF3L1-202ENST00000409020 KLF16Q9BXK1 252 aaPredicted RBP10.14□□□□□ -0.79
NIF3L1-202ENST00000409020 DUSP16Q9BY84 665 aa10.14□□□□□ -0.79
NIF3L1-202ENST00000409020 NACA2Q9H009 215 aa10.14□□□□□ -0.79
NIF3L1-202ENST00000409020 FBXO44Q9H4M3 255 aa10.14□□□□□ -0.79
NIF3L1-202ENST00000409020 CYLDQ9NQC7 956 aa10.14□□□□□ -0.79
NIF3L1-202ENST00000409020 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.14□□□□□ -0.79
NIF3L1-202ENST00000409020 MYO6Q9UM54 1294 aa10.14□□□□□ -0.79
NIF3L1-202ENST00000409020 KIAA1549LQ6ZVL6 1849 aa10.14□□□□□ -0.79
NIF3L1-202ENST00000409020 E2F8A0AVK6 867 aa10.13□□□□□ -0.79
NIF3L1-202ENST00000409020 PSMA7O14818 248 aa10.13□□□□□ -0.79
NIF3L1-202ENST00000409020 DCLK1O15075 740 aa10.13□□□□□ -0.79
NIF3L1-202ENST00000409020 SLU7O95391 586 aaKnown RBP10.13□□□□□ -0.79
NIF3L1-202ENST00000409020 ADH5P11766 374 aa10.13□□□□□ -0.79
NIF3L1-202ENST00000409020 RARGP13631 454 aa10.13□□□□□ -0.79
NIF3L1-202ENST00000409020 ID4P47928 161 aa10.13□□□□□ -0.79
NIF3L1-202ENST00000409020 FMO5P49326 533 aa10.13□□□□□ -0.79
NIF3L1-202ENST00000409020 AMPD2Q01433 879 aa10.13□□□□□ -0.79
NIF3L1-202ENST00000409020 SPEM2Q0P670 501 aa10.13□□□□□ -0.79
NIF3L1-202ENST00000409020 CCDC6Q16204 474 aa10.13□□□□□ -0.79
NIF3L1-202ENST00000409020 GOLGA7BQ2TAP0 167 aa10.13□□□□□ -0.79
NIF3L1-202ENST00000409020 C16orf87Q6PH81 154 aa10.13□□□□□ -0.79
NIF3L1-202ENST00000409020 BHLHA9Q7RTU4 235 aa10.13□□□□□ -0.79
NIF3L1-202ENST00000409020 PIGZQ86VD9 579 aa10.13□□□□□ -0.79
NIF3L1-202ENST00000409020 WDR5BQ86VZ2 330 aa10.13□□□□□ -0.79
NIF3L1-202ENST00000409020 ELOA2Q8IYF1 753 aaPredicted RBP10.13□□□□□ -0.79
NIF3L1-202ENST00000409020 PHTF2Q8N3S3 785 aa10.13□□□□□ -0.79
NIF3L1-202ENST00000409020 CCDC33Q8N5R6 958 aa10.13□□□□□ -0.79
NIF3L1-202ENST00000409020 C3orf20Q8ND61 904 aa10.13□□□□□ -0.79
NIF3L1-202ENST00000409020 USP33Q8TEY7 942 aa10.13□□□□□ -0.79
NIF3L1-202ENST00000409020 DHTKD1Q96HY7 919 aaPredicted RBP10.13□□□□□ -0.79
NIF3L1-202ENST00000409020 MED15Q96RN5 788 aa10.13□□□□□ -0.79
NIF3L1-202ENST00000409020 ZSWIM1Q9BR11 485 aa10.13□□□□□ -0.79
NIF3L1-202ENST00000409020 IRX2Q9BZI1 471 aaPredicted RBP10.13□□□□□ -0.79
NIF3L1-202ENST00000409020 TLR8Q9NR97 1041 aaKnown RBP10.13□□□□□ -0.79
NIF3L1-202ENST00000409020 COMMD8Q9NX08 183 aa10.13□□□□□ -0.79
NIF3L1-202ENST00000409020 NAGPAQ9UK23 515 aa10.13□□□□□ -0.79
NIF3L1-202ENST00000409020 HCN2Q9UL51 889 aa10.13□□□□□ -0.79
NIF3L1-202ENST00000409020 SLC8A2Q9UPR5 921 aa10.13□□□□□ -0.79
NIF3L1-202ENST00000409020 USP3Q9Y6I4 520 aa10.13□□□□□ -0.79
NIF3L1-202ENST00000409020 FREM2Q5SZK8 3169 aa10.13□□□□□ -0.79
NIF3L1-202ENST00000409020 ZZEF1O43149 2961 aa10.13□□□□□ -0.79
NIF3L1-202ENST00000409020 CHD8Q9HCK8 2581 aa10.13□□□□□ -0.79
NIF3L1-202ENST00000409020 RNF225M0QZC1 329 aaPredicted RBP10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 STX10O60499 249 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 ADCY5O95622 1261 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 GCKP35557 465 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 NR1H3Q13133 447 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 DMC1Q14565 340 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 CCDC40Q4G0X9 1142 aa10.12□□□□□ -0.79
NIF3L1-202ENST00000409020 ARHGAP17Q68EM7 881 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms