RNA–Protein interactions for RNA: ENST00000406908.3

HMGA1P7-201, Transcript of high mobility group AT-hook 1 pseudogene 7, humanhuman

BASIC

Gene HMGA1P7, Length 502 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P7-201ENST00000406908 DUS2Q9NX74 493 aaKnown RBP17.49■□□□□ 0.39
HMGA1P7-201ENST00000406908 COX16Q9P0S2 106 aa17.49■□□□□ 0.39
HMGA1P7-201ENST00000406908 TLR6Q9Y2C9 796 aa17.49■□□□□ 0.39
HMGA1P7-201ENST00000406908 TMEM191CA6NGB0 347 aa17.48■□□□□ 0.39
HMGA1P7-201ENST00000406908 GPD1P21695 349 aa17.48■□□□□ 0.39
HMGA1P7-201ENST00000406908 CORO1AP31146 461 aaKnown RBP17.48■□□□□ 0.39
HMGA1P7-201ENST00000406908 SDC4P31431 198 aa17.48■□□□□ 0.39
HMGA1P7-201ENST00000406908 GBP1P32455 592 aa17.48■□□□□ 0.39
HMGA1P7-201ENST00000406908 CYLC1P35663 651 aaPredicted RBP17.48■□□□□ 0.39
HMGA1P7-201ENST00000406908 MAGEA1P43355 309 aa17.48■□□□□ 0.39
HMGA1P7-201ENST00000406908 IFNAR2P48551 515 aa17.48■□□□□ 0.39
HMGA1P7-201ENST00000406908 ATXN1P54253 815 aaKnown RBP17.48■□□□□ 0.39
HMGA1P7-201ENST00000406908 ATP11AP98196 1134 aa17.48■□□□□ 0.39
HMGA1P7-201ENST00000406908 RING1Q06587 406 aa17.48■□□□□ 0.39
HMGA1P7-201ENST00000406908 NME3Q13232 169 aa17.48■□□□□ 0.39
HMGA1P7-201ENST00000406908 C15orf59Q2T9L4 293 aaPredicted RBP17.48■□□□□ 0.39
HMGA1P7-201ENST00000406908 EML3Q32P44 896 aa17.48■□□□□ 0.39
HMGA1P7-201ENST00000406908 RAB6CQ53S08 254 aa17.48■□□□□ 0.39
HMGA1P7-201ENST00000406908 IER5LQ5T953 404 aa17.48■□□□□ 0.39
HMGA1P7-201ENST00000406908 SH3PXD2AQ5TCZ1 1133 aa17.48■□□□□ 0.39
HMGA1P7-201ENST00000406908 BNIPLQ7Z465 357 aa17.48■□□□□ 0.39
HMGA1P7-201ENST00000406908 DENND1CQ8IV53 801 aa17.48■□□□□ 0.39
HMGA1P7-201ENST00000406908 ADGRG2Q8IZP9 1017 aa17.48■□□□□ 0.39
HMGA1P7-201ENST00000406908 IRF7Q92985 503 aa17.48■□□□□ 0.39
HMGA1P7-201ENST00000406908 PGAP3Q96FM1 320 aaPredicted RBP17.48■□□□□ 0.39
HMGA1P7-201ENST00000406908 DCLK3Q9C098 648 aa17.48■□□□□ 0.39
HMGA1P7-201ENST00000406908 RAB6CQ9H0N0 254 aa17.48■□□□□ 0.39
HMGA1P7-201ENST00000406908 EBF3Q9H4W6 596 aa17.48■□□□□ 0.39
HMGA1P7-201ENST00000406908 HPS4Q9NQG7 708 aa17.48■□□□□ 0.39
HMGA1P7-201ENST00000406908 PIGVQ9NUD9 493 aa17.48■□□□□ 0.39
HMGA1P7-201ENST00000406908 LSM7Q9UK45 103 aaKnown RBP17.48■□□□□ 0.39
HMGA1P7-201ENST00000406908 AGO1Q9UL18 857 aaKnown RBP17.48■□□□□ 0.39
HMGA1P7-201ENST00000406908 OTOL1A6NHN0 477 aaPredicted RBP17.47■□□□□ 0.39
HMGA1P7-201ENST00000406908 EIF3CLB5ME19 914 aaKnown RBP17.47■□□□□ 0.39
HMGA1P7-201ENST00000406908 SLC9A3R1O14745 358 aaPredicted RBP17.47■□□□□ 0.39
HMGA1P7-201ENST00000406908 ENDOD1O94919 500 aa17.47■□□□□ 0.39
HMGA1P7-201ENST00000406908 NDUFA10O95299 355 aa17.47■□□□□ 0.39
HMGA1P7-201ENST00000406908 TMEM253P0C7T8 217 aa17.47■□□□□ 0.39
HMGA1P7-201ENST00000406908 PTPN9P43378 593 aa17.47■□□□□ 0.39
HMGA1P7-201ENST00000406908 HARS2P49590 506 aaKnown RBP17.47■□□□□ 0.39
HMGA1P7-201ENST00000406908 ZNF143P52747 638 aaPredicted RBP17.47■□□□□ 0.39
HMGA1P7-201ENST00000406908 PDGFRLQ15198 375 aa17.47■□□□□ 0.39
HMGA1P7-201ENST00000406908 CENPIQ92674 756 aaPredicted RBP17.47■□□□□ 0.39
HMGA1P7-201ENST00000406908 EIF3CQ99613 913 aaKnown RBP17.47■□□□□ 0.39
HMGA1P7-201ENST00000406908 COL25A1Q9BXS0 654 aaPredicted RBP17.47■□□□□ 0.39
HMGA1P7-201ENST00000406908 MRPL47Q9HD33 250 aaKnown RBP17.47■□□□□ 0.39
HMGA1P7-201ENST00000406908 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.47■□□□□ 0.39
HMGA1P7-201ENST00000406908 GTSE1Q9NYZ3 720 aa17.47■□□□□ 0.39
HMGA1P7-201ENST00000406908 TBC1D14Q9P2M4 693 aa17.47■□□□□ 0.39
HMGA1P7-201ENST00000406908 SCINQ9Y6U3 715 aa17.47■□□□□ 0.39
HMGA1P7-201ENST00000406908 VCANP13611 3396 aa17.46■□□□□ 0.39
HMGA1P7-201ENST00000406908 KCNU1A8MYU2 1149 aa17.46■□□□□ 0.39
HMGA1P7-201ENST00000406908 F9P00740 461 aa17.46■□□□□ 0.39
HMGA1P7-201ENST00000406908 CXCR3P49682 368 aa17.46■□□□□ 0.39
HMGA1P7-201ENST00000406908 ZXDAP98168 799 aa17.46■□□□□ 0.39
HMGA1P7-201ENST00000406908 DEUP1Q05D60 604 aa17.46■□□□□ 0.39
HMGA1P7-201ENST00000406908 RUNX3Q13761 415 aa17.46■□□□□ 0.39
HMGA1P7-201ENST00000406908 CDO1Q16878 200 aa17.46■□□□□ 0.39
HMGA1P7-201ENST00000406908 C10orf76Q5T2E6 689 aa17.46■□□□□ 0.39
HMGA1P7-201ENST00000406908 NUGGCQ68CJ6 796 aa17.46■□□□□ 0.39
HMGA1P7-201ENST00000406908 UNC45BQ8IWX7 931 aa17.46■□□□□ 0.39
HMGA1P7-201ENST00000406908 UBALD2Q8IYN6 164 aa17.46■□□□□ 0.39
HMGA1P7-201ENST00000406908 TTC8Q8TAM2 541 aa17.46■□□□□ 0.39
HMGA1P7-201ENST00000406908 CTNNBL1Q8WYA6 563 aaPredicted RBP17.46■□□□□ 0.39
HMGA1P7-201ENST00000406908 ANP32BQ92688 251 aaKnown RBP17.46■□□□□ 0.39
HMGA1P7-201ENST00000406908 NUP85Q9BW27 656 aa17.46■□□□□ 0.39
HMGA1P7-201ENST00000406908 TRPV5Q9NQA5 729 aa17.46■□□□□ 0.39
HMGA1P7-201ENST00000406908 XPO7Q9UIA9 1087 aaKnown RBP17.46■□□□□ 0.39
HMGA1P7-201ENST00000406908 ZNF510Q9Y2H8 683 aa17.46■□□□□ 0.39
HMGA1P7-201ENST00000406908 REXO2Q9Y3B8 237 aaKnown RBP17.46■□□□□ 0.39
HMGA1P7-201ENST00000406908 PCDHA13Q9Y5I0 950 aa17.46■□□□□ 0.39
HMGA1P7-201ENST00000406908 KIF26AQ9ULI4 1882 aaPredicted RBP17.46■□□□□ 0.38
HMGA1P7-201ENST00000406908 MYOFQ9NZM1 2061 aa17.45■□□□□ 0.38
HMGA1P7-201ENST00000406908 CCP110O43303 1012 aa17.45■□□□□ 0.38
HMGA1P7-201ENST00000406908 CCR1P32246 355 aa17.45■□□□□ 0.38
HMGA1P7-201ENST00000406908 RDXP35241 583 aaKnown RBP17.45■□□□□ 0.38
HMGA1P7-201ENST00000406908 HDAC4P56524 1084 aa17.45■□□□□ 0.38
HMGA1P7-201ENST00000406908 PFKPQ01813 784 aa17.45■□□□□ 0.38
HMGA1P7-201ENST00000406908 ZNF252P-AS1Q0IIN9 211 aa17.45■□□□□ 0.38
HMGA1P7-201ENST00000406908 PPP2R5DQ14738 602 aa17.45■□□□□ 0.38
HMGA1P7-201ENST00000406908 DHCR24Q15392 516 aa17.45■□□□□ 0.38
HMGA1P7-201ENST00000406908 SPA17Q15506 151 aa17.45■□□□□ 0.38
HMGA1P7-201ENST00000406908 RHBDF2Q6PJF5 856 aa17.45■□□□□ 0.38
HMGA1P7-201ENST00000406908 LRRC8AQ8IWT6 810 aa17.45■□□□□ 0.38
HMGA1P7-201ENST00000406908 FAM172AQ8WUF8 416 aa17.45■□□□□ 0.38
HMGA1P7-201ENST00000406908 DNASE1L2Q92874 299 aa17.45■□□□□ 0.38
HMGA1P7-201ENST00000406908 RNF34Q969K3 372 aa17.45■□□□□ 0.38
HMGA1P7-201ENST00000406908 AZIN2Q96A70 460 aa17.45■□□□□ 0.38
HMGA1P7-201ENST00000406908 OTUB2Q96DC9 234 aa17.45■□□□□ 0.38
HMGA1P7-201ENST00000406908 PDLIM2Q96JY6 352 aa17.45■□□□□ 0.38
HMGA1P7-201ENST00000406908 CNPY3Q9BT09 278 aa17.45■□□□□ 0.38
HMGA1P7-201ENST00000406908 ECT2Q9H8V3 914 aa17.45■□□□□ 0.38
HMGA1P7-201ENST00000406908 ANLNQ9NQW6 1124 aa17.45■□□□□ 0.38
HMGA1P7-201ENST00000406908 STOML2Q9UJZ1 356 aa17.45■□□□□ 0.38
HMGA1P7-201ENST00000406908 INTUQ9ULD6 942 aa17.45■□□□□ 0.38
HMGA1P7-201ENST00000406908 TFR2Q9UP52 801 aa17.45■□□□□ 0.38
HMGA1P7-201ENST00000406908 F5P12259 2224 aa17.44■□□□□ 0.38
HMGA1P7-201ENST00000406908 GOLGA6L7A0A1B0GV03 622 aa17.44■□□□□ 0.38
HMGA1P7-201ENST00000406908 I6L893 689 aaPredicted RBP17.44■□□□□ 0.38
HMGA1P7-201ENST00000406908 DCXO43602 365 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms