RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 AFPP02771 609 aaKnown RBP16.07■□□□□ 0.16
TPM1-207ENST00000403994 LCP1P13796 627 aa16.07■□□□□ 0.16
TPM1-207ENST00000403994 RGS7P49802 495 aa16.07■□□□□ 0.16
TPM1-207ENST00000403994 MFAP3P55082 362 aa16.07■□□□□ 0.16
TPM1-207ENST00000403994 UBE2HP62256 183 aa16.07■□□□□ 0.16
TPM1-207ENST00000403994 STILQ15468 1287 aa16.07■□□□□ 0.16
TPM1-207ENST00000403994 TRIP4Q15650 581 aaPredicted RBP16.07■□□□□ 0.16
TPM1-207ENST00000403994 BSPRYQ5W0U4 402 aa16.07■□□□□ 0.16
TPM1-207ENST00000403994 PMF1Q6P1K2 205 aa16.07■□□□□ 0.16
TPM1-207ENST00000403994 CPXM2Q8N436 756 aa16.07■□□□□ 0.16
TPM1-207ENST00000403994 FRMD1Q8N878 549 aa16.07■□□□□ 0.16
TPM1-207ENST00000403994 KREMEN1Q96MU8 473 aa16.07■□□□□ 0.16
TPM1-207ENST00000403994 EDEM2Q9BV94 578 aa16.07■□□□□ 0.16
TPM1-207ENST00000403994 SRRTQ9BXP5 876 aaKnown RBP16.07■□□□□ 0.16
TPM1-207ENST00000403994 CACNA2D2Q9NY47 1150 aa16.07■□□□□ 0.16
TPM1-207ENST00000403994 SLC27A6Q9Y2P4 619 aa16.07■□□□□ 0.16
TPM1-207ENST00000403994 GON4LQ3T8J9 2241 aa16.06■□□□□ 0.16
TPM1-207ENST00000403994 PI4KAP42356 2102 aa16.06■□□□□ 0.16
TPM1-207ENST00000403994 LNP1A1A4G5 178 aa16.06■□□□□ 0.16
TPM1-207ENST00000403994 NDUFV2P19404 249 aa16.06■□□□□ 0.16
TPM1-207ENST00000403994 DHPSP49366 369 aaPredicted RBP16.06■□□□□ 0.16
TPM1-207ENST00000403994 CAMK4Q16566 473 aa16.06■□□□□ 0.16
TPM1-207ENST00000403994 PPM1JQ5JR12 505 aa16.06■□□□□ 0.16
TPM1-207ENST00000403994 STPG1Q5TH74 334 aa16.06■□□□□ 0.16
TPM1-207ENST00000403994 IL31Q6EBC2 164 aa16.06■□□□□ 0.16
TPM1-207ENST00000403994 KIAA1211LQ6NV74 962 aa16.06■□□□□ 0.16
TPM1-207ENST00000403994 MSANTD2Q6P1R3 559 aa16.06■□□□□ 0.16
TPM1-207ENST00000403994 LPCAT2Q7L5N7 544 aa16.06■□□□□ 0.16
TPM1-207ENST00000403994 PGBD3Q8N328 593 aa16.06■□□□□ 0.16
TPM1-207ENST00000403994 CLEC4CQ8WTT0 213 aa16.06■□□□□ 0.16
TPM1-207ENST00000403994 RNF139Q8WU17 664 aa16.06■□□□□ 0.16
TPM1-207ENST00000403994 SLC35F5Q8WV83 523 aa16.06■□□□□ 0.16
TPM1-207ENST00000403994 ERLEC1Q96DZ1 483 aa16.06■□□□□ 0.16
TPM1-207ENST00000403994 KIAA1468Q9P260 1216 aa16.06■□□□□ 0.16
TPM1-207ENST00000403994 SFMBT1Q9UHJ3 866 aa16.06■□□□□ 0.16
TPM1-207ENST00000403994 HBS1LQ9Y450 684 aaKnown RBP16.06■□□□□ 0.16
TPM1-207ENST00000403994 RAD54BQ9Y620 910 aa16.06■□□□□ 0.16
TPM1-207ENST00000403994 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.05■□□□□ 0.16
TPM1-207ENST00000403994 PIK3R2O00459 728 aa16.05■□□□□ 0.16
TPM1-207ENST00000403994 PTGER3P43115 390 aa16.05■□□□□ 0.16
TPM1-207ENST00000403994 CNGA2Q16280 664 aa16.05■□□□□ 0.16
TPM1-207ENST00000403994 GEN1Q17RS7 908 aa16.05■□□□□ 0.16
TPM1-207ENST00000403994 ARMCX6Q7L4S7 300 aa16.05■□□□□ 0.16
TPM1-207ENST00000403994 ANKS1BQ7Z6G8 1248 aa16.05■□□□□ 0.16
TPM1-207ENST00000403994 TMEFF1Q8IYR6 380 aa16.05■□□□□ 0.16
TPM1-207ENST00000403994 EHBP1Q8NDI1 1231 aa16.05■□□□□ 0.16
TPM1-207ENST00000403994 IPO4Q8TEX9 1081 aaKnown RBP16.05■□□□□ 0.16
TPM1-207ENST00000403994 IRGQQ8WZA9 623 aa16.05■□□□□ 0.16
TPM1-207ENST00000403994 PIWIL1Q96J94 861 aaKnown RBP16.05■□□□□ 0.16
TPM1-207ENST00000403994 ABCC13Q9NSE7 274 aa16.05■□□□□ 0.16
TPM1-207ENST00000403994 RWDD2AQ9UIY3 292 aa16.05■□□□□ 0.16
TPM1-207ENST00000403994 CLEC4EQ9ULY5 219 aa16.05■□□□□ 0.16
TPM1-207ENST00000403994 CNTN6Q9UQ52 1028 aa16.05■□□□□ 0.16
TPM1-207ENST00000403994 ATXN2Q99700 1313 aaKnown RBP16.04■□□□□ 0.16
TPM1-207ENST00000403994 PATE3B3GLJ2 98 aa16.04■□□□□ 0.16
TPM1-207ENST00000403994 GFRA2O00451 464 aa16.04■□□□□ 0.16
TPM1-207ENST00000403994 MAP3K13O43283 966 aa16.04■□□□□ 0.16
TPM1-207ENST00000403994 LTFP02788 710 aa16.04■□□□□ 0.16
TPM1-207ENST00000403994 CYBBP04839 570 aa16.04■□□□□ 0.16
TPM1-207ENST00000403994 HOXD9P28356 352 aaPredicted RBP16.04■□□□□ 0.16
TPM1-207ENST00000403994 HARS2P49590 506 aaKnown RBP16.04■□□□□ 0.16
TPM1-207ENST00000403994 BYSLQ13895 437 aaKnown RBP16.04■□□□□ 0.16
TPM1-207ENST00000403994 RNF43Q68DV7 783 aa16.04■□□□□ 0.16
TPM1-207ENST00000403994 SDE2Q6IQ49 451 aa16.04■□□□□ 0.16
TPM1-207ENST00000403994 DDI1Q8WTU0 396 aa16.04■□□□□ 0.16
TPM1-207ENST00000403994 DDX1Q92499 740 aaKnown RBP16.04■□□□□ 0.16
TPM1-207ENST00000403994 MED15Q96RN5 788 aa16.04■□□□□ 0.16
TPM1-207ENST00000403994 SLC6A17Q9H1V8 727 aa16.04■□□□□ 0.16
TPM1-207ENST00000403994 CHMP5Q9NZZ3 219 aa16.04■□□□□ 0.16
TPM1-207ENST00000403994 STOML2Q9UJZ1 356 aa16.04■□□□□ 0.16
TPM1-207ENST00000403994 KMT2BQ9UMN6 2715 aaPredicted RBP16.04■□□□□ 0.16
TPM1-207ENST00000403994 PCDH15Q96QU1 1955 aa16.04■□□□□ 0.16
TPM1-207ENST00000403994 MAP1BP46821 2468 aaKnown RBP16.03■□□□□ 0.16
TPM1-207ENST00000403994 WASH3PC4AMC7 463 aa16.03■□□□□ 0.16
TPM1-207ENST00000403994 FBXO21O94952 628 aa16.03■□□□□ 0.16
TPM1-207ENST00000403994 FGFR1OPO95684 399 aaKnown RBP16.03■□□□□ 0.16
TPM1-207ENST00000403994 LATS1O95835 1130 aa16.03■□□□□ 0.16
TPM1-207ENST00000403994 IGLV3-27P01718 113 aa16.03■□□□□ 0.16
TPM1-207ENST00000403994 KRT5P13647 590 aa16.03■□□□□ 0.16
TPM1-207ENST00000403994 KCNA4P22459 653 aa16.03■□□□□ 0.16
TPM1-207ENST00000403994 EIF4HQ15056 248 aaKnown RBP16.03■□□□□ 0.16
TPM1-207ENST00000403994 SPDYCQ5MJ68 293 aa16.03■□□□□ 0.16
TPM1-207ENST00000403994 LYSMD4Q5XG99 296 aa16.03■□□□□ 0.16
TPM1-207ENST00000403994 TRIM65Q6PJ69 517 aa16.03■□□□□ 0.16
TPM1-207ENST00000403994 PIGKQ92643 395 aa16.03■□□□□ 0.16
TPM1-207ENST00000403994 MRGPRX1Q96LB2 322 aa16.03■□□□□ 0.16
TPM1-207ENST00000403994 HSFY1Q96LI6 401 aa16.03■□□□□ 0.16
TPM1-207ENST00000403994 CD93Q9NPY3 652 aa16.03■□□□□ 0.16
TPM1-207ENST00000403994 THAP10Q9P2Z0 257 aaPredicted RBP16.03■□□□□ 0.16
TPM1-207ENST00000403994 STON1Q9Y6Q2 735 aa16.03■□□□□ 0.16
TPM1-207ENST00000403994 USP24Q9UPU5 2620 aa16.03■□□□□ 0.16
TPM1-207ENST00000403994 NYNRINQ9P2P1 1898 aaKnown RBP16.03■□□□□ 0.16
TPM1-207ENST00000403994 IGHV1OR15-9A0A0B4J2B8 117 aa16.02■□□□□ 0.16
TPM1-207ENST00000403994 TM4SF5O14894 197 aa16.02■□□□□ 0.16
TPM1-207ENST00000403994 AP5Z1O43299 807 aa16.02■□□□□ 0.16
TPM1-207ENST00000403994 ADRB1P08588 477 aa16.02■□□□□ 0.16
TPM1-207ENST00000403994 IL12RB1P42701 662 aa16.02■□□□□ 0.16
TPM1-207ENST00000403994 SGSHP51688 502 aa16.02■□□□□ 0.16
TPM1-207ENST00000403994 ZNF445P59923 1031 aa16.02■□□□□ 0.16
TPM1-207ENST00000403994 RPL6Q02878 288 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms