RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 PARVGQ9HBI0 331 aa9.81□□□□□ -0.84
NUP43-204ENST00000403890 MARK1Q9P0L2 795 aa9.81□□□□□ -0.84
NUP43-204ENST00000403890 FLNCQ14315 2725 aa9.81□□□□□ -0.84
NUP43-204ENST00000403890 VILLO15195 856 aa9.8□□□□□ -0.84
NUP43-204ENST00000403890 KLK10O43240 276 aa9.8□□□□□ -0.84
NUP43-204ENST00000403890 TSPAN3O60637 253 aa9.8□□□□□ -0.84
NUP43-204ENST00000403890 JAK2O60674 1132 aa9.8□□□□□ -0.84
NUP43-204ENST00000403890 FAM13AO94988 1023 aa9.8□□□□□ -0.84
NUP43-204ENST00000403890 RTN3O95197 1032 aaPredicted RBP9.8□□□□□ -0.84
NUP43-204ENST00000403890 ACO1P21399 889 aaKnown RBP9.8□□□□□ -0.84
NUP43-204ENST00000403890 TUBP50607 506 aa9.8□□□□□ -0.84
NUP43-204ENST00000403890 COPAP53621 1224 aa9.8□□□□□ -0.84
NUP43-204ENST00000403890 CDH8P55286 799 aa9.8□□□□□ -0.84
NUP43-204ENST00000403890 NFATC3Q12968 1075 aa9.8□□□□□ -0.84
NUP43-204ENST00000403890 POSTNQ15063 836 aa9.8□□□□□ -0.84
NUP43-204ENST00000403890 ANKRD1Q15327 319 aa9.8□□□□□ -0.84
NUP43-204ENST00000403890 IL17AQ16552 155 aa9.8□□□□□ -0.84
NUP43-204ENST00000403890 MDH1BQ5I0G3 518 aa9.8□□□□□ -0.84
NUP43-204ENST00000403890 PRAMEF14Q5SWL7 426 aa9.8□□□□□ -0.84
NUP43-204ENST00000403890 SNX30Q5VWJ9 437 aa9.8□□□□□ -0.84
NUP43-204ENST00000403890 SCARA3Q6AZY7 606 aa9.8□□□□□ -0.84
NUP43-204ENST00000403890 DTHD1Q6ZMT9 781 aa9.8□□□□□ -0.84
NUP43-204ENST00000403890 ZNF574Q6ZN55 896 aaPredicted RBP9.8□□□□□ -0.84
NUP43-204ENST00000403890 HS2ST1Q7LGA3 356 aa9.8□□□□□ -0.84
NUP43-204ENST00000403890 LIMS2Q7Z4I7 341 aa9.8□□□□□ -0.84
NUP43-204ENST00000403890 CACUL1Q86Y37 369 aa9.8□□□□□ -0.84
NUP43-204ENST00000403890 EID2Q8N6I1 236 aa9.8□□□□□ -0.84
NUP43-204ENST00000403890 KBTBD7Q8WVZ9 684 aa9.8□□□□□ -0.84
NUP43-204ENST00000403890 RFFLQ8WZ73 363 aa9.8□□□□□ -0.84
NUP43-204ENST00000403890 POMGNT1Q8WZA1 660 aa9.8□□□□□ -0.84
NUP43-204ENST00000403890 GTF3C6Q969F1 213 aa9.8□□□□□ -0.84
NUP43-204ENST00000403890 FBXO32Q969P5 355 aa9.8□□□□□ -0.84
NUP43-204ENST00000403890 SKA1Q96BD8 255 aa9.8□□□□□ -0.84
NUP43-204ENST00000403890 REEP2Q9BRK0 252 aa9.8□□□□□ -0.84
NUP43-204ENST00000403890 DPH1Q9BZG8 443 aa9.8□□□□□ -0.84
NUP43-204ENST00000403890 TRIM9Q9C026 710 aa9.8□□□□□ -0.84
NUP43-204ENST00000403890 CCSER2Q9H7U1 834 aa9.8□□□□□ -0.84
NUP43-204ENST00000403890 ANKMY1Q9P2S6 941 aa9.8□□□□□ -0.84
NUP43-204ENST00000403890 FBXO10Q9UK96 956 aa9.8□□□□□ -0.84
NUP43-204ENST00000403890 NOL7Q9UMY1 257 aaKnown RBP9.8□□□□□ -0.84
NUP43-204ENST00000403890 R3HCC1Q9Y3T6 440 aaKnown RBP9.8□□□□□ -0.84
NUP43-204ENST00000403890 TMEM131Q92545 1883 aa9.8□□□□□ -0.84
NUP43-204ENST00000403890 PTPRJQ12913 1337 aa9.8□□□□□ -0.84
NUP43-204ENST00000403890 GREM1O60565 184 aa9.79□□□□□ -0.84
NUP43-204ENST00000403890 FSBPO95073 299 aa9.79□□□□□ -0.84
NUP43-204ENST00000403890 SEMA4FO95754 770 aa9.79□□□□□ -0.84
NUP43-204ENST00000403890 GP1BBP13224 206 aa9.79□□□□□ -0.84
NUP43-204ENST00000403890 CKMT2P17540 419 aa9.79□□□□□ -0.84
NUP43-204ENST00000403890 WARSP23381 471 aaKnown RBP9.79□□□□□ -0.84
NUP43-204ENST00000403890 ZNF131P52739 623 aa9.79□□□□□ -0.84
NUP43-204ENST00000403890 BCAT1P54687 386 aa9.79□□□□□ -0.84
NUP43-204ENST00000403890 WNT7BP56706 349 aa9.79□□□□□ -0.84
NUP43-204ENST00000403890 RACK1P63244 317 aaKnown RBP9.79□□□□□ -0.84
NUP43-204ENST00000403890 IRX6P78412 446 aaPredicted RBP9.79□□□□□ -0.84
NUP43-204ENST00000403890 ME3Q16798 604 aa9.79□□□□□ -0.84
NUP43-204ENST00000403890 KDM7AQ6ZMT4 941 aa9.79□□□□□ -0.84
NUP43-204ENST00000403890 LSMEM2Q8N112 164 aa9.79□□□□□ -0.84
NUP43-204ENST00000403890 SAP25Q8TEE9 199 aa9.79□□□□□ -0.84
NUP43-204ENST00000403890 KCNE4Q8WWG9 221 aa9.79□□□□□ -0.84
NUP43-204ENST00000403890 BHMTQ93088 406 aa9.79□□□□□ -0.84
NUP43-204ENST00000403890 HPDLQ96IR7 371 aa9.79□□□□□ -0.84
NUP43-204ENST00000403890 FAM213AQ9BRX8 229 aa9.79□□□□□ -0.84
NUP43-204ENST00000403890 ELOVL4Q9GZR5 314 aa9.79□□□□□ -0.84
NUP43-204ENST00000403890 BTBD1Q9H0C5 482 aa9.79□□□□□ -0.84
NUP43-204ENST00000403890 TMEM30AQ9NV96 361 aa9.79□□□□□ -0.84
NUP43-204ENST00000403890 ADAMTS1Q9UHI8 967 aa9.79□□□□□ -0.84
NUP43-204ENST00000403890 SIX4Q9UIU6 781 aa9.79□□□□□ -0.84
NUP43-204ENST00000403890 LSM7Q9UK45 103 aaKnown RBP9.79□□□□□ -0.84
NUP43-204ENST00000403890 SLC27A6Q9Y2P4 619 aa9.79□□□□□ -0.84
NUP43-204ENST00000403890 ARID1BQ8NFD5 2236 aaPredicted RBP9.78□□□□□ -0.84
NUP43-204ENST00000403890 TLN1Q9Y490 2541 aaKnown RBP9.78□□□□□ -0.84
NUP43-204ENST00000403890 K7ENP7 123 aa9.78□□□□□ -0.84
NUP43-204ENST00000403890 TERTO14746 1132 aaKnown RBP9.78□□□□□ -0.84
NUP43-204ENST00000403890 YKT6O15498 198 aa9.78□□□□□ -0.84
NUP43-204ENST00000403890 DXOO77932 396 aaKnown RBP9.78□□□□□ -0.84
NUP43-204ENST00000403890 MT-CO3P00414 261 aa9.78□□□□□ -0.84
NUP43-204ENST00000403890 GNL1P36915 607 aaPredicted RBP9.78□□□□□ -0.84
NUP43-204ENST00000403890 PRPHP41219 470 aa9.78□□□□□ -0.84
NUP43-204ENST00000403890 CACNA2D1P54289 1103 aa9.78□□□□□ -0.84
NUP43-204ENST00000403890 ERVPABLB-1P60509 514 aa9.78□□□□□ -0.84
NUP43-204ENST00000403890 E2F1Q01094 437 aa9.78□□□□□ -0.84
NUP43-204ENST00000403890 INSM1Q01101 510 aaPredicted RBP9.78□□□□□ -0.84
NUP43-204ENST00000403890 GNL2Q13823 731 aaKnown RBP9.78□□□□□ -0.84
NUP43-204ENST00000403890 ZNF234Q14588 700 aa9.78□□□□□ -0.84
NUP43-204ENST00000403890 SHBQ15464 509 aa9.78□□□□□ -0.84
NUP43-204ENST00000403890 GEN1Q17RS7 908 aa9.78□□□□□ -0.84
NUP43-204ENST00000403890 INO80CQ6PI98 192 aaPredicted RBP9.78□□□□□ -0.84
NUP43-204ENST00000403890 ATG14Q6ZNE5 492 aa9.78□□□□□ -0.84
NUP43-204ENST00000403890 GPBP1Q86WP2 473 aa9.78□□□□□ -0.84
NUP43-204ENST00000403890 BRSK2Q8IWQ3 736 aa9.78□□□□□ -0.84
NUP43-204ENST00000403890 SCAMP5Q8TAC9 235 aa9.78□□□□□ -0.84
NUP43-204ENST00000403890 CDK5RAP3Q96JB5 506 aa9.78□□□□□ -0.84
NUP43-204ENST00000403890 C8orf76Q96K31 380 aa9.78□□□□□ -0.84
NUP43-204ENST00000403890 FIZ1Q96SL8 496 aa9.78□□□□□ -0.84
NUP43-204ENST00000403890 MMS19Q96T76 1030 aa9.78□□□□□ -0.84
NUP43-204ENST00000403890 KLF16Q9BXK1 252 aaPredicted RBP9.78□□□□□ -0.84
NUP43-204ENST00000403890 LHX5Q9H2C1 402 aa9.78□□□□□ -0.84
NUP43-204ENST00000403890 SNX25Q9H3E2 840 aa9.78□□□□□ -0.84
NUP43-204ENST00000403890 ZHX3Q9H4I2 956 aa9.78□□□□□ -0.84
NUP43-204ENST00000403890 RTN4Q9NQC3 1192 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms