RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 RARGP13631 454 aa12.52□□□□□ -0.41
SPTLC1P3-201ENST00000403408 OXTRP30559 389 aa12.52□□□□□ -0.41
SPTLC1P3-201ENST00000403408 ATP5C1P36542 298 aaKnown RBP12.52□□□□□ -0.41
SPTLC1P3-201ENST00000403408 CYP2J2P51589 502 aa12.52□□□□□ -0.41
SPTLC1P3-201ENST00000403408 AFF3P51826 1226 aaKnown RBP12.52□□□□□ -0.41
SPTLC1P3-201ENST00000403408 DNAJC3Q13217 504 aa12.52□□□□□ -0.41
SPTLC1P3-201ENST00000403408 STARD3Q14849 445 aa12.52□□□□□ -0.41
SPTLC1P3-201ENST00000403408 CLEC20AQ6ZU45 233 aa12.52□□□□□ -0.41
SPTLC1P3-201ENST00000403408 ZC3H3Q8IXZ2 948 aaKnown RBP12.52□□□□□ -0.41
SPTLC1P3-201ENST00000403408 ZNF366Q8N895 744 aa12.52□□□□□ -0.41
SPTLC1P3-201ENST00000403408 ZNF507Q8TCN5 953 aa12.52□□□□□ -0.41
SPTLC1P3-201ENST00000403408 SNX19Q92543 992 aa12.52□□□□□ -0.41
SPTLC1P3-201ENST00000403408 PRCCQ92733 491 aaPredicted RBP12.52□□□□□ -0.41
SPTLC1P3-201ENST00000403408 BIRC7Q96CA5 298 aa12.52□□□□□ -0.41
SPTLC1P3-201ENST00000403408 EBF2Q9HAK2 575 aa12.52□□□□□ -0.41
SPTLC1P3-201ENST00000403408 TLR8Q9NR97 1041 aaKnown RBP12.52□□□□□ -0.41
SPTLC1P3-201ENST00000403408 FAM49BQ9NUQ9 324 aa12.52□□□□□ -0.41
SPTLC1P3-201ENST00000403408 ELOVL2Q9NXB9 296 aa12.52□□□□□ -0.41
SPTLC1P3-201ENST00000403408 TLN1Q9Y490 2541 aaKnown RBP12.52□□□□□ -0.41
SPTLC1P3-201ENST00000403408 NBPF19A0A087WUL8 3843 aa12.52□□□□□ -0.41
SPTLC1P3-201ENST00000403408 DOCK9Q9BZ29 2069 aa12.52□□□□□ -0.41
SPTLC1P3-201ENST00000403408 COL5A1P20908 1838 aaPredicted RBP12.51□□□□□ -0.41
SPTLC1P3-201ENST00000403408 TSPAN3O60637 253 aa12.51□□□□□ -0.41
SPTLC1P3-201ENST00000403408 WNT1P04628 370 aa12.51□□□□□ -0.41
SPTLC1P3-201ENST00000403408 GRK6P43250 576 aa12.51□□□□□ -0.41
SPTLC1P3-201ENST00000403408 NDST1P52848 882 aa12.51□□□□□ -0.41
SPTLC1P3-201ENST00000403408 KLHDC10Q6PID8 442 aa12.51□□□□□ -0.41
SPTLC1P3-201ENST00000403408 BRAPQ7Z569 592 aa12.51□□□□□ -0.41
SPTLC1P3-201ENST00000403408 GATAD2AQ86YP4 633 aa12.51□□□□□ -0.41
SPTLC1P3-201ENST00000403408 CRYBG2Q8N1P7 616 aa12.51□□□□□ -0.41
SPTLC1P3-201ENST00000403408 JAKMIP2Q96AA8 810 aa12.51□□□□□ -0.41
SPTLC1P3-201ENST00000403408 CCDC39Q9UFE4 941 aa12.51□□□□□ -0.41
SPTLC1P3-201ENST00000403408 LSM7Q9UK45 103 aaKnown RBP12.51□□□□□ -0.41
SPTLC1P3-201ENST00000403408 AGO1Q9UL18 857 aaKnown RBP12.51□□□□□ -0.41
SPTLC1P3-201ENST00000403408 KIF3AQ9Y496 699 aa12.51□□□□□ -0.41
SPTLC1P3-201ENST00000403408 UBR5O95071 2799 aaPredicted RBP12.51□□□□□ -0.41
SPTLC1P3-201ENST00000403408 LRRIQ3A6PVS8 624 aaPredicted RBP12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 C10orf142B7Z368 130 aa12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 WNT9AO14904 365 aa12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 PAPSS1O43252 624 aaPredicted RBP12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 C4BPAP04003 597 aaKnown RBP12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 IGHV4-34P06331 123 aa12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 EPHX1P07099 455 aa12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 HMBSP08397 361 aa12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 ADORA2BP29275 332 aa12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 CASP1P29466 404 aa12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 ATICP31939 592 aa12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 STAT6P42226 847 aa12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 PLA2G4AP47712 749 aa12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 GRIA4P48058 902 aa12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 CCT8P50990 548 aa12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 SEMG2Q02383 582 aa12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 EHHADHQ08426 723 aa12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 TARDBPQ13148 414 aaKnown RBP eCLIP12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 TRPC3Q13507 836 aa12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 CAMK2GQ13555 558 aaPredicted RBP12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 E2F4Q16254 413 aa12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 BMT2Q1RMZ1 405 aa12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 SPOPLQ6IQ16 392 aa12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 TMPRSS12Q86WS5 348 aa12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 NELFCDQ8IXH7 590 aa12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 PDILTQ8N807 584 aa12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 OR2T3Q8NH03 318 aa12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 CYB5D2Q8WUJ1 264 aa12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 IGSF8Q969P0 613 aa12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 SYAP1Q96A49 352 aaPredicted RBP12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 FCRL3Q96P31 734 aaPredicted RBP12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 TMEM245Q9H330 911 aa12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 MTG2Q9H4K7 406 aa12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 FBXO44Q9H4M3 255 aa12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 KIAA1586Q9HCI6 787 aa12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 OSGEPQ9NPF4 335 aa12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 DNMT3LQ9UJW3 386 aa12.5□□□□□ -0.41
SPTLC1P3-201ENST00000403408 ATP8B3O60423 1300 aa12.49□□□□□ -0.41
SPTLC1P3-201ENST00000403408 A0A1B0GTQ1 180 aa12.49□□□□□ -0.41
SPTLC1P3-201ENST00000403408 E9PAM4 449 aa12.49□□□□□ -0.41
SPTLC1P3-201ENST00000403408 PYCARD-AS1I3L0S3 204 aa12.49□□□□□ -0.41
SPTLC1P3-201ENST00000403408 SYNCRIPO60506 623 aaKnown RBP12.49□□□□□ -0.41
SPTLC1P3-201ENST00000403408 CORO1AP31146 461 aaKnown RBP12.49□□□□□ -0.41
SPTLC1P3-201ENST00000403408 KIF11P52732 1056 aa12.49□□□□□ -0.41
SPTLC1P3-201ENST00000403408 ZNF132P52740 706 aa12.49□□□□□ -0.41
SPTLC1P3-201ENST00000403408 RPS14P62263 151 aaKnown RBP12.49□□□□□ -0.41
SPTLC1P3-201ENST00000403408 DLG4P78352 724 aa12.49□□□□□ -0.41
SPTLC1P3-201ENST00000403408 CLDN10P78369 228 aa12.49□□□□□ -0.41
SPTLC1P3-201ENST00000403408 CEBPZQ03701 1054 aaKnown RBP12.49□□□□□ -0.41
SPTLC1P3-201ENST00000403408 SUZ12Q15022 739 aaKnown RBP12.49□□□□□ -0.41
SPTLC1P3-201ENST00000403408 ZNF699Q32M78 642 aa12.49□□□□□ -0.41
SPTLC1P3-201ENST00000403408 C10orf120Q5SQS8 335 aa12.49□□□□□ -0.41
SPTLC1P3-201ENST00000403408 CCDC73Q6ZRK6 1079 aa12.49□□□□□ -0.41
SPTLC1P3-201ENST00000403408 ANKS1BQ7Z6G8 1248 aa12.49□□□□□ -0.41
SPTLC1P3-201ENST00000403408 ZNF605Q86T29 641 aa12.49□□□□□ -0.41
SPTLC1P3-201ENST00000403408 CCDC65Q8IXS2 484 aa12.49□□□□□ -0.41
SPTLC1P3-201ENST00000403408 XXYLT1Q8NBI6 393 aa12.49□□□□□ -0.41
SPTLC1P3-201ENST00000403408 SEMA4CQ9C0C4 833 aa12.49□□□□□ -0.41
SPTLC1P3-201ENST00000403408 PCED1AQ9H1Q7 454 aa12.49□□□□□ -0.41
SPTLC1P3-201ENST00000403408 LHX5Q9H2C1 402 aa12.49□□□□□ -0.41
SPTLC1P3-201ENST00000403408 SERGEFQ9UGK8 458 aa12.49□□□□□ -0.41
SPTLC1P3-201ENST00000403408 TEX15Q9BXT5 2789 aa12.48□□□□□ -0.41
SPTLC1P3-201ENST00000403408 NPC1O15118 1278 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms