RNA–Protein interactions for RNA: ENST00000402697.5

PRAME-203, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-203ENST00000402697 SLC9A7Q96T83 725 aa13.47□□□□□ -0.25
PRAME-203ENST00000402697 DHX35Q9H5Z1 703 aaKnown RBP13.47□□□□□ -0.25
PRAME-203ENST00000402697 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.47□□□□□ -0.25
PRAME-203ENST00000402697 H3BRJ5 948 aa13.46□□□□□ -0.25
PRAME-203ENST00000402697 DAB1O75553 588 aa13.46□□□□□ -0.25
PRAME-203ENST00000402697 DGKIO75912 1065 aa13.46□□□□□ -0.25
PRAME-203ENST00000402697 FGFR1P11362 822 aa13.46□□□□□ -0.25
PRAME-203ENST00000402697 CALB2P22676 271 aa13.46□□□□□ -0.25
PRAME-203ENST00000402697 WARSP23381 471 aaKnown RBP13.46□□□□□ -0.25
PRAME-203ENST00000402697 TARSP26639 723 aaKnown RBP13.46□□□□□ -0.25
PRAME-203ENST00000402697 E2F5Q15329 346 aa13.46□□□□□ -0.25
PRAME-203ENST00000402697 CTC1Q2NKJ3 1217 aa13.46□□□□□ -0.25
PRAME-203ENST00000402697 PPP6R3Q5H9R7 873 aaPredicted RBP13.46□□□□□ -0.25
PRAME-203ENST00000402697 MORN1Q5T089 497 aa13.46□□□□□ -0.25
PRAME-203ENST00000402697 PDZD4Q76G19 769 aaPredicted RBP13.46□□□□□ -0.25
PRAME-203ENST00000402697 SAPCD2Q86UD0 394 aa13.46□□□□□ -0.25
PRAME-203ENST00000402697 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.46□□□□□ -0.25
PRAME-203ENST00000402697 ENDOVQ8N8Q3 282 aaKnown RBP13.46□□□□□ -0.25
PRAME-203ENST00000402697 APPL2Q8NEU8 664 aa13.46□□□□□ -0.25
PRAME-203ENST00000402697 KCTD13Q8WZ19 329 aa13.46□□□□□ -0.25
PRAME-203ENST00000402697 NSL1Q96IY1 281 aa13.46□□□□□ -0.25
PRAME-203ENST00000402697 OLFM3Q96PB7 478 aa13.46□□□□□ -0.25
PRAME-203ENST00000402697 FAM111AQ96PZ2 611 aa13.46□□□□□ -0.25
PRAME-203ENST00000402697 HNRNPABQ99729 332 aaKnown RBP13.46□□□□□ -0.25
PRAME-203ENST00000402697 TBC1D10AQ9BXI6 508 aa13.46□□□□□ -0.25
PRAME-203ENST00000402697 FAM96AQ9H5X1 160 aa13.46□□□□□ -0.25
PRAME-203ENST00000402697 RNPEPL1Q9HAU8 725 aa13.46□□□□□ -0.25
PRAME-203ENST00000402697 FAM49BQ9NUQ9 324 aa13.46□□□□□ -0.25
PRAME-203ENST00000402697 MOCS1Q9NZB8 636 aa13.46□□□□□ -0.25
PRAME-203ENST00000402697 SIRPGQ9P1W8 387 aa13.46□□□□□ -0.25
PRAME-203ENST00000402697 HAO1Q9UJM8 370 aa13.46□□□□□ -0.25
PRAME-203ENST00000402697 SORCS3Q9UPU3 1222 aa13.46□□□□□ -0.25
PRAME-203ENST00000402697 MANSC4A6NHS7 340 aaPredicted RBP13.46□□□□□ -0.26
PRAME-203ENST00000402697 F2P00734 622 aa13.46□□□□□ -0.26
PRAME-203ENST00000402697 DLDP09622 509 aaKnown RBP13.46□□□□□ -0.26
PRAME-203ENST00000402697 ELF1P32519 619 aa13.46□□□□□ -0.26
PRAME-203ENST00000402697 GLUD2P49448 558 aa13.46□□□□□ -0.26
PRAME-203ENST00000402697 FRG1Q14331 258 aaKnown RBP13.46□□□□□ -0.26
PRAME-203ENST00000402697 PDK1Q15118 436 aa13.46□□□□□ -0.26
PRAME-203ENST00000402697 CA9Q16790 459 aa13.46□□□□□ -0.26
PRAME-203ENST00000402697 CMPK2Q5EBM0 449 aa13.46□□□□□ -0.26
PRAME-203ENST00000402697 LRRC8BQ6P9F7 803 aa13.46□□□□□ -0.26
PRAME-203ENST00000402697 KCNT2Q6UVM3 1135 aa13.46□□□□□ -0.26
PRAME-203ENST00000402697 UNC5AQ6ZN44 842 aa13.46□□□□□ -0.26
PRAME-203ENST00000402697 MARK2Q7KZI7 788 aaKnown RBP13.46□□□□□ -0.26
PRAME-203ENST00000402697 MTDHQ86UE4 582 aaKnown RBP13.46□□□□□ -0.26
PRAME-203ENST00000402697 NME8Q8N427 588 aa13.46□□□□□ -0.26
PRAME-203ENST00000402697 HTR3CQ8WXA8 447 aa13.46□□□□□ -0.26
PRAME-203ENST00000402697 SKA1Q96BD8 255 aa13.46□□□□□ -0.26
PRAME-203ENST00000402697 TBC1D31Q96DN5 1066 aa13.46□□□□□ -0.26
PRAME-203ENST00000402697 BRD8Q9H0E9 1235 aa13.46□□□□□ -0.26
PRAME-203ENST00000402697 STN1Q9H668 368 aaKnown RBP13.46□□□□□ -0.26
PRAME-203ENST00000402697 GPATCH2LQ9NWQ4 482 aa13.46□□□□□ -0.26
PRAME-203ENST00000402697 MTMR10Q9NXD2 777 aa13.46□□□□□ -0.26
PRAME-203ENST00000402697 FZD10Q9ULW2 581 aa13.46□□□□□ -0.26
PRAME-203ENST00000402697 STAP1Q9ULZ2 295 aa13.46□□□□□ -0.26
PRAME-203ENST00000402697 SDR42E2A6NKP2 422 aa13.45□□□□□ -0.26
PRAME-203ENST00000402697 GOLGA8RI6L899 631 aa13.45□□□□□ -0.26
PRAME-203ENST00000402697 RFPL1O75677 317 aa13.45□□□□□ -0.26
PRAME-203ENST00000402697 GABBR2O75899 941 aa13.45□□□□□ -0.26
PRAME-203ENST00000402697 RECQL4O94761 1208 aa13.45□□□□□ -0.26
PRAME-203ENST00000402697 NOS2P35228 1153 aa13.45□□□□□ -0.26
PRAME-203ENST00000402697 ZBTB16Q05516 673 aa13.45□□□□□ -0.26
PRAME-203ENST00000402697 TAF1CQ15572 869 aaPredicted RBP13.45□□□□□ -0.26
PRAME-203ENST00000402697 KIZQ2M2Z5 673 aa13.45□□□□□ -0.26
PRAME-203ENST00000402697 TAB3Q8N5C8 712 aaPredicted RBP13.45□□□□□ -0.26
PRAME-203ENST00000402697 MAB21L3Q8N8X9 362 aa13.45□□□□□ -0.26
PRAME-203ENST00000402697 CCDC110Q8TBZ0 833 aa13.45□□□□□ -0.26
PRAME-203ENST00000402697 KBTBD7Q8WVZ9 684 aa13.45□□□□□ -0.26
PRAME-203ENST00000402697 ATP2A3Q93084 1043 aa13.45□□□□□ -0.26
PRAME-203ENST00000402697 NT5C3BQ969T7 300 aa13.45□□□□□ -0.26
PRAME-203ENST00000402697 UTP4Q969X6 686 aaKnown RBP13.45□□□□□ -0.26
PRAME-203ENST00000402697 STAMBPL1Q96FJ0 436 aa13.45□□□□□ -0.26
PRAME-203ENST00000402697 BTBD10Q9BSF8 475 aa13.45□□□□□ -0.26
PRAME-203ENST00000402697 HEY2Q9UBP5 337 aa13.45□□□□□ -0.26
PRAME-203ENST00000402697 TUBGCP4Q9UGJ1 667 aa13.45□□□□□ -0.26
PRAME-203ENST00000402697 USP3Q9Y6I4 520 aa13.45□□□□□ -0.26
PRAME-203ENST00000402697 WDR91A4D1P6 747 aa13.44□□□□□ -0.26
PRAME-203ENST00000402697 NCAM2O15394 837 aa13.44□□□□□ -0.26
PRAME-203ENST00000402697 HUS1O60921 280 aa13.44□□□□□ -0.26
PRAME-203ENST00000402697 FBXO21O94952 628 aa13.44□□□□□ -0.26
PRAME-203ENST00000402697 LRPAP1P30533 357 aa13.44□□□□□ -0.26
PRAME-203ENST00000402697 INSCQ1MX18 579 aa13.44□□□□□ -0.26
PRAME-203ENST00000402697 PLEKHG4Q58EX7 1191 aa13.44□□□□□ -0.26
PRAME-203ENST00000402697 PRAMEF19Q5SWL8 479 aa13.44□□□□□ -0.26
PRAME-203ENST00000402697 NCBP2-AS2Q69YL0 99 aa13.44□□□□□ -0.26
PRAME-203ENST00000402697 ZNF534Q76KX8 674 aa13.44□□□□□ -0.26
PRAME-203ENST00000402697 BNIPLQ7Z465 357 aa13.44□□□□□ -0.26
PRAME-203ENST00000402697 PRPF39Q86UA1 669 aaKnown RBP13.44□□□□□ -0.26
PRAME-203ENST00000402697 LONP2Q86WA8 852 aa13.44□□□□□ -0.26
PRAME-203ENST00000402697 E2F7Q96AV8 911 aa13.44□□□□□ -0.26
PRAME-203ENST00000402697 KCTD15Q96SI1 283 aaPredicted RBP13.44□□□□□ -0.26
PRAME-203ENST00000402697 DUSP16Q9BY84 665 aa13.44□□□□□ -0.26
PRAME-203ENST00000402697 WWP1Q9H0M0 922 aa13.44□□□□□ -0.26
PRAME-203ENST00000402697 RRN3Q9NYV6 651 aa13.44□□□□□ -0.26
PRAME-203ENST00000402697 DTLQ9NZJ0 730 aa13.44□□□□□ -0.26
PRAME-203ENST00000402697 SMIM28A0A1B0GU29 152 aa13.44□□□□□ -0.26
PRAME-203ENST00000402697 PIK3R2O00459 728 aa13.44□□□□□ -0.26
PRAME-203ENST00000402697 MTSS1O43312 755 aa13.44□□□□□ -0.26
PRAME-203ENST00000402697 AVILO75366 819 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms