RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 HASPINQ8TF76 798 aa11.47□□□□□ -0.57
SCFD2-202ENST00000401642 TMEM40Q8WWA1 233 aa11.47□□□□□ -0.57
SCFD2-202ENST00000401642 EDEM1Q92611 657 aa11.47□□□□□ -0.57
SCFD2-202ENST00000401642 KHSRPQ92945 711 aaKnown RBP eCLIP11.47□□□□□ -0.574e-6■■□□□ 14.3
SCFD2-202ENST00000401642 MIPEPQ99797 713 aa11.47□□□□□ -0.57
SCFD2-202ENST00000401642 VPS11Q9H270 941 aa11.47□□□□□ -0.57
SCFD2-202ENST00000401642 SLC15A5A6NIM6 579 aa11.46□□□□□ -0.57
SCFD2-202ENST00000401642 FCHO1O14526 889 aa11.46□□□□□ -0.57
SCFD2-202ENST00000401642 CXCL11O14625 94 aa11.46□□□□□ -0.57
SCFD2-202ENST00000401642 ATP9BO43861 1147 aa11.46□□□□□ -0.57
SCFD2-202ENST00000401642 TPH1P17752 444 aa11.46□□□□□ -0.57
SCFD2-202ENST00000401642 TKTP29401 623 aaKnown RBP11.46□□□□□ -0.57
SCFD2-202ENST00000401642 HOXA11P31270 313 aaPredicted RBP11.46□□□□□ -0.57
SCFD2-202ENST00000401642 ATICP31939 592 aa11.46□□□□□ -0.57
SCFD2-202ENST00000401642 SLC26A2P50443 739 aa11.46□□□□□ -0.57
SCFD2-202ENST00000401642 AFF1P51825 1210 aaKnown RBP11.46□□□□□ -0.57
SCFD2-202ENST00000401642 MAP3K7CLP57077 242 aa11.46□□□□□ -0.57
SCFD2-202ENST00000401642 MARCH8Q5T0T0 291 aa11.46□□□□□ -0.57
SCFD2-202ENST00000401642 TTC39BQ5VTQ0 682 aaPredicted RBP11.46□□□□□ -0.57
SCFD2-202ENST00000401642 TWF2Q6IBS0 349 aaKnown RBP11.46□□□□□ -0.57
SCFD2-202ENST00000401642 HFE2Q6ZVN8 426 aa11.46□□□□□ -0.57
SCFD2-202ENST00000401642 FASTKD5Q7L8L6 764 aaKnown RBP11.46□□□□□ -0.57
SCFD2-202ENST00000401642 PID1Q7Z2X4 250 aa11.46□□□□□ -0.57
SCFD2-202ENST00000401642 BEST2Q8NFU1 509 aa11.46□□□□□ -0.57
SCFD2-202ENST00000401642 USP33Q8TEY7 942 aa11.46□□□□□ -0.57
SCFD2-202ENST00000401642 MZB1Q8WU39 189 aa11.46□□□□□ -0.57
SCFD2-202ENST00000401642 ITFG2Q969R8 447 aa11.46□□□□□ -0.57
SCFD2-202ENST00000401642 ZNF570Q96NI8 536 aa11.46□□□□□ -0.57
SCFD2-202ENST00000401642 MROH8Q9H579 483 aa11.46□□□□□ -0.57
SCFD2-202ENST00000401642 PRDM16Q9HAZ2 1276 aa11.46□□□□□ -0.57
SCFD2-202ENST00000401642 POPDC2Q9HBU9 364 aa11.46□□□□□ -0.57
SCFD2-202ENST00000401642 PSAT1Q9Y617 370 aa11.46□□□□□ -0.57
SCFD2-202ENST00000401642 LCTP09848 1927 aa11.46□□□□□ -0.58
SCFD2-202ENST00000401642 M0QYT0 321 aa11.46□□□□□ -0.58
SCFD2-202ENST00000401642 CCND1P24385 295 aa11.46□□□□□ -0.58
SCFD2-202ENST00000401642 PTPN7P35236 360 aa11.46□□□□□ -0.58
SCFD2-202ENST00000401642 ARL4AP40617 200 aa11.46□□□□□ -0.58
SCFD2-202ENST00000401642 PEX6Q13608 980 aa11.46□□□□□ -0.58
SCFD2-202ENST00000401642 UBAP2LQ14157 1087 aaKnown RBP11.46□□□□□ -0.58
SCFD2-202ENST00000401642 KPNB1Q14974 876 aaKnown RBP11.46□□□□□ -0.58
SCFD2-202ENST00000401642 KHDC1Q4VXA5 237 aaKnown RBP11.46□□□□□ -0.58
SCFD2-202ENST00000401642 WLSQ5T9L3 541 aa11.46□□□□□ -0.58
SCFD2-202ENST00000401642 SYPL2Q5VXT5 272 aa11.46□□□□□ -0.58
SCFD2-202ENST00000401642 RINLQ6ZS11 566 aa11.46□□□□□ -0.58
SCFD2-202ENST00000401642 COLGALT1Q8NBJ5 622 aa11.46□□□□□ -0.58
SCFD2-202ENST00000401642 CSPG4P5Q96PW8 444 aa11.46□□□□□ -0.58
SCFD2-202ENST00000401642 EBF4Q9BQW3 602 aa11.46□□□□□ -0.58
SCFD2-202ENST00000401642 RHOBTB2Q9BYZ6 727 aa11.46□□□□□ -0.58
SCFD2-202ENST00000401642 C20orf27Q9GZN8 174 aa11.46□□□□□ -0.58
SCFD2-202ENST00000401642 B2RBV5 119 aa11.45□□□□□ -0.58
SCFD2-202ENST00000401642 MFSD11O43934 449 aa11.45□□□□□ -0.58
SCFD2-202ENST00000401642 KRT36O76013 467 aa11.45□□□□□ -0.58
SCFD2-202ENST00000401642 SNAI1O95863 264 aaPredicted RBP11.45□□□□□ -0.58
SCFD2-202ENST00000401642 APOEP02649 317 aa11.45□□□□□ -0.58
SCFD2-202ENST00000401642 MYL3P08590 195 aa11.45□□□□□ -0.58
SCFD2-202ENST00000401642 PSMB4P28070 264 aa11.45□□□□□ -0.58
SCFD2-202ENST00000401642 L1CAMP32004 1257 aa11.45□□□□□ -0.58
SCFD2-202ENST00000401642 SOX4Q06945 474 aaPredicted RBP11.45□□□□□ -0.58
SCFD2-202ENST00000401642 SNAPC2Q13487 334 aa11.45□□□□□ -0.58
SCFD2-202ENST00000401642 RASA2Q15283 850 aa11.45□□□□□ -0.58
SCFD2-202ENST00000401642 FBXO47Q5MNV8 452 aa11.45□□□□□ -0.58
SCFD2-202ENST00000401642 CES4AQ5XG92 561 aa11.45□□□□□ -0.58
SCFD2-202ENST00000401642 PIGZQ86VD9 579 aa11.45□□□□□ -0.58
SCFD2-202ENST00000401642 DNAAF3Q8N9W5 541 aa11.45□□□□□ -0.58
SCFD2-202ENST00000401642 SLC35F5Q8WV83 523 aa11.45□□□□□ -0.58
SCFD2-202ENST00000401642 E2F7Q96AV8 911 aa11.45□□□□□ -0.58
SCFD2-202ENST00000401642 L3MBTL3Q96JM7 780 aaPredicted RBP11.45□□□□□ -0.58
SCFD2-202ENST00000401642 FAM161BQ96MY7 647 aa11.45□□□□□ -0.58
SCFD2-202ENST00000401642 CADM1Q9BY67 442 aaKnown RBP11.45□□□□□ -0.58
SCFD2-202ENST00000401642 GCOM2Q9BZD3 368 aaPredicted RBP11.45□□□□□ -0.58
SCFD2-202ENST00000401642 DTLQ9NZJ0 730 aa11.45□□□□□ -0.58
SCFD2-202ENST00000401642 TXNDC16Q9P2K2 825 aa11.45□□□□□ -0.58
SCFD2-202ENST00000401642 CPA4Q9UI42 421 aa11.45□□□□□ -0.58
SCFD2-202ENST00000401642 PACSIN3Q9UKS6 424 aa11.45□□□□□ -0.58
SCFD2-202ENST00000401642 LOC100653049A0A140TA62 436 aa11.45□□□□□ -0.58
SCFD2-202ENST00000401642 TREHO43280 583 aa11.45□□□□□ -0.58
SCFD2-202ENST00000401642 KRT34O76011 436 aa11.45□□□□□ -0.58
SCFD2-202ENST00000401642 BAG2O95816 211 aa11.45□□□□□ -0.58
SCFD2-202ENST00000401642 CCNB1P14635 433 aa11.45□□□□□ -0.58
SCFD2-202ENST00000401642 VAV1P15498 845 aa11.45□□□□□ -0.58
SCFD2-202ENST00000401642 EPHX2P34913 555 aa11.45□□□□□ -0.58
SCFD2-202ENST00000401642 IRX1P78414 480 aaPredicted RBP11.45□□□□□ -0.58
SCFD2-202ENST00000401642 LRRC36Q1X8D7 754 aa11.45□□□□□ -0.58
SCFD2-202ENST00000401642 C9orf57Q5W0N0 161 aa11.45□□□□□ -0.58
SCFD2-202ENST00000401642 CMC1Q7Z7K0 106 aa11.45□□□□□ -0.58
SCFD2-202ENST00000401642 TNS4Q8IZW8 715 aa11.45□□□□□ -0.58
SCFD2-202ENST00000401642 SLC7A14Q8TBB6 771 aa11.45□□□□□ -0.58
SCFD2-202ENST00000401642 CYP4F11Q9HBI6 524 aa11.45□□□□□ -0.58
SCFD2-202ENST00000401642 LRRC4Q9HBW1 653 aa11.45□□□□□ -0.58
SCFD2-202ENST00000401642 MGAMO43451 1857 aa11.45□□□□□ -0.58
SCFD2-202ENST00000401642 KPNA7A9QM74 516 aa11.44□□□□□ -0.58
SCFD2-202ENST00000401642 BTBD19C9JJ37 291 aa11.44□□□□□ -0.58
SCFD2-202ENST00000401642 E7ESA3 106 aa11.44□□□□□ -0.58
SCFD2-202ENST00000401642 RNF103O00237 685 aa11.44□□□□□ -0.58
SCFD2-202ENST00000401642 ZMPSTE24O75844 475 aa11.44□□□□□ -0.58
SCFD2-202ENST00000401642 GABRB2P47870 512 aa11.44□□□□□ -0.58
SCFD2-202ENST00000401642 RASSF2P50749 326 aa11.44□□□□□ -0.58
SCFD2-202ENST00000401642 ACVR2BQ13705 512 aa11.44□□□□□ -0.58
SCFD2-202ENST00000401642 RCN1Q15293 331 aa11.44□□□□□ -0.58
SCFD2-202ENST00000401642 VWA5B1Q5TIE3 1220 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms