RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 RPS6KB2Q9UBS0 482 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 CAMTA1Q9Y6Y1 1673 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 SLCO1B7G3V0H7 640 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 PEX1O43933 1283 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 PSMG1O95456 288 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 PIK3R1P27986 724 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 PEX5P50542 639 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 TMEM132DQ14C87 1099 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 AGAP9Q5VTM2 703 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 SPOCD1Q6ZMY3 1216 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 ZCCHC23Q6ZST2 131 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 KCNK18Q7Z418 384 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 ZCCHC7Q8N3Z6 543 aaKnown RBP9.1□□□□□ -0.95
PTPRM-202ENST00000400053 OSCP1Q8WVF1 389 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 UNKQ9C0B0 810 aaKnown RBP9.1□□□□□ -0.95
PTPRM-202ENST00000400053 KIAA1683Q9H0B3 1180 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 MUC3BQ9H195 1237 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 DAPK2Q9UIK4 370 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 CRLS1Q9UJA2 301 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 RUVBL2Q9Y230 463 aaKnown RBP9.1□□□□□ -0.95
PTPRM-202ENST00000400053 RAD54BQ9Y620 910 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 ADGRA3Q8IWK6 1321 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 SDR42E2A6NKP2 422 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 STX7O15400 261 aaKnown RBP9.1□□□□□ -0.95
PTPRM-202ENST00000400053 PGM3O95394 542 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 BCL10O95999 233 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 PROCP04070 461 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 MMRN1Q13201 1228 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 TRIM25Q14258 630 aaKnown RBP9.1□□□□□ -0.95
PTPRM-202ENST00000400053 OTUD3Q5T2D3 398 aaPredicted RBP9.1□□□□□ -0.95
PTPRM-202ENST00000400053 IER5Q5VY09 327 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 CDK20Q8IZL9 346 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 C19orf18Q8NEA5 215 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 ANKRD49Q8WVL7 239 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 FAM136AQ96C01 138 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 UBXN6Q9BZV1 441 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 DCLK3Q9C098 648 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 ROGDIQ9GZN7 287 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 DDX4Q9NQI0 724 aaKnown RBP9.1□□□□□ -0.95
PTPRM-202ENST00000400053 MRC1P22897 1456 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 SF3B1O75533 1304 aaKnown RBP eCLIP9.1□□□□□ -0.95
PTPRM-202ENST00000400053 MROH7Q68CQ1 1323 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 PDZK1P1A8MUH7 402 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 RHOBTB1O94844 696 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 GRK2P25098 689 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 HOXA10P31260 410 aaPredicted RBP9.1□□□□□ -0.95
PTPRM-202ENST00000400053 GRK3P35626 688 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 RXRGP48443 463 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 RHBDL3P58872 404 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 IL17AQ16552 155 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 AADACL2Q6P093 401 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 CRELD2Q6UXH1 353 aaPredicted RBP9.1□□□□□ -0.95
PTPRM-202ENST00000400053 ZNF512Q96ME7 567 aaPredicted RBP9.1□□□□□ -0.95
PTPRM-202ENST00000400053 GAKO14976 1311 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 CES2O00748 559 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 DCXO43602 365 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 KRT36O76013 467 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 UNC5CO95185 931 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 TNFAIP8O95379 198 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 HPGDP15428 266 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 ATP6V1B2P21281 511 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 FDFT1P37268 417 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 SV2CQ496J9 727 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 FAM180AQ6UWF9 173 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 ZNF662Q6ZS27 426 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 TFB1MQ8WVM0 346 aaKnown RBP9.1□□□□□ -0.95
PTPRM-202ENST00000400053 TNFRSF25Q93038 417 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 SLC35C1Q96A29 364 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 CENPTQ96BT3 561 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 ATG4CQ96DT6 458 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 TCF7L2Q9NQB0 619 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 CNGB3Q9NQW8 809 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 WWOXQ9NZC7 414 aa9.1□□□□□ -0.95
PTPRM-202ENST00000400053 TRMT6Q9UJA5 497 aaKnown RBP9.1□□□□□ -0.95
PTPRM-202ENST00000400053 SMIM31A0A1B0GVY4 71 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 CSDE1O75534 798 aaKnown RBP9.09□□□□□ -0.95
PTPRM-202ENST00000400053 CHRM3P20309 590 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 DRD4P21917 467 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 GPC1P35052 558 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 HARS2P49590 506 aaKnown RBP9.09□□□□□ -0.95
PTPRM-202ENST00000400053 DCTN2Q13561 401 aaKnown RBP9.09□□□□□ -0.95
PTPRM-202ENST00000400053 DGKDQ16760 1214 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 TBCELQ5QJ74 424 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 IRAK1BP1Q5VVH5 260 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 ZCCHC8Q6NZY4 707 aaKnown RBP9.09□□□□□ -0.95
PTPRM-202ENST00000400053 GLB1LQ6UWU2 654 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 CYP2R1Q6VVX0 501 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 LRRC71Q8N4P6 559 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 ZSCAN18Q8TBC5 510 aaPredicted RBP9.09□□□□□ -0.95
PTPRM-202ENST00000400053 CKAP2Q8WWK9 683 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 TMEM106CQ9BVX2 250 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 CHST7Q9NS84 486 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 KLHL3Q9UH77 587 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 NR5A2O00482 541 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 CLOCKO15516 846 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 ZC3H11AO75152 810 aaKnown RBP eCLIP9.09□□□□□ -0.95
PTPRM-202ENST00000400053 CLTBP09497 229 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 MZF1P28698 734 aaPredicted RBP9.09□□□□□ -0.95
PTPRM-202ENST00000400053 PBX1P40424 430 aa9.09□□□□□ -0.95
PTPRM-202ENST00000400053 PNPLA4P41247 253 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms