RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 S1PR5Q9H228 398 aa7.12□□□□□ -1.27
USP16-203ENST00000399975 FAM204AQ9H8W3 233 aa7.12□□□□□ -1.27
USP16-203ENST00000399975 MRFAP1Q9Y605 127 aa7.12□□□□□ -1.27
USP16-203ENST00000399975 CCL16O15467 120 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 COCHO43405 550 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 TLR5O60602 858 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 ZRANB2O95218 330 aaKnown RBP eCLIP7.11□□□□□ -1.27
USP16-203ENST00000399975 RARAP10276 462 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 KDELR1P24390 212 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 HOXC13P31276 330 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 PITX1P78337 314 aaPredicted RBP7.11□□□□□ -1.27
USP16-203ENST00000399975 ARL13BQ3SXY8 428 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 DDX42Q86XP3 938 aaKnown RBP eCLIP7.11□□□□□ -1.27
USP16-203ENST00000399975 CREG2Q8IUH2 290 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 UNC45BQ8IWX7 931 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 HS6ST3Q8IZP7 471 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 SHKBP1Q8TBC3 707 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 MAIP1Q8WWC4 291 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 EDEM1Q92611 657 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 ZFRQ96KR1 1074 aaKnown RBP7.11□□□□□ -1.27
USP16-203ENST00000399975 ZNF670Q9BS34 389 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 FRMD8P1Q9BZ68 369 aaPredicted RBP7.11□□□□□ -1.27
USP16-203ENST00000399975 TSPYL1Q9H0U9 437 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 GOLPH3Q9H4A6 298 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 MARCH2Q9P0N8 246 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 CCDC195A0A1B0GUA6 201 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 RFXAPO00287 272 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 PER2O15055 1255 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 TNRC18O15417 2968 aaPredicted RBP7.11□□□□□ -1.27
USP16-203ENST00000399975 RHOP08100 348 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 TCF4P15884 667 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 L1CAMP32004 1257 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 CCR1P32246 355 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 COG7P83436 770 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 ATP11AP98196 1134 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 ARHGAP15Q53QZ3 475 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 ZNF697Q5TEC3 545 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 MANEALQ5VSG8 457 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 NUGGCQ68CJ6 796 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 MICALL1Q8N3F8 863 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 MRPS31Q92665 395 aaKnown RBP7.11□□□□□ -1.27
USP16-203ENST00000399975 SNRNP25Q9BV90 132 aaKnown RBP7.11□□□□□ -1.27
USP16-203ENST00000399975 TASP1Q9H6P5 420 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 TRPV4Q9HBA0 871 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 DDIT4Q9NX09 232 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 MTMR10Q9NXD2 777 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 MAGED2Q9UNF1 606 aaPredicted RBP7.11□□□□□ -1.27
USP16-203ENST00000399975 ZNF510Q9Y2H8 683 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 FAM170AA1A519 330 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 WASH4PA8MWX3 477 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 GFRA2O00451 464 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 ENC1O14682 589 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 GABRR2P28476 465 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 CDKN2BP42772 138 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 MARCKSL1P49006 195 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 TBX4P57082 545 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 CKAP4Q07065 602 aaKnown RBP7.11□□□□□ -1.27
USP16-203ENST00000399975 GRIN2CQ14957 1233 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 RAB6CQ53S08 254 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 C10orf120Q5SQS8 335 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 SYCE2Q6PIF2 218 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 SPOCD1Q6ZMY3 1216 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 PDZD4Q76G19 769 aaPredicted RBP7.11□□□□□ -1.27
USP16-203ENST00000399975 MAP7D3Q8IWC1 876 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 ZNF683Q8IZ20 524 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 CCDC185Q8N715 623 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 ATP6V0D2Q8N8Y2 350 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 MSLNLQ96KJ4 702 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 BTN2A3PQ96KV6 586 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 NAP1L3Q99457 506 aaPredicted RBP7.11□□□□□ -1.27
USP16-203ENST00000399975 PRMT1Q99873 361 aaKnown RBP7.11□□□□□ -1.27
USP16-203ENST00000399975 DCLK3Q9C098 648 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 RAB6CQ9H0N0 254 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 ADAM7Q9H2U9 754 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 WDCPQ9H6R7 721 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 CCSER2Q9H7U1 834 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 OBP2AQ9NY56 170 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.11□□□□□ -1.27
USP16-203ENST00000399975 PPARGC1AQ9UBK2 798 aaKnown RBP7.11□□□□□ -1.27
USP16-203ENST00000399975 ARHGAP26Q9UNA1 814 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 USTQ9Y2C2 406 aa7.11□□□□□ -1.27
USP16-203ENST00000399975 IGLV3-10A0A075B6K4 115 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 TRAV19A0A0A6YYK7 116 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 SPDYE4A6NLX3 237 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 SOX1O00570 391 aaPredicted RBP7.1□□□□□ -1.27
USP16-203ENST00000399975 KCNK3O14649 394 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 GREM1O60565 184 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 RFPL2O75678 378 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 PYGMP11217 842 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 CETN2P41208 172 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 CCR2P41597 374 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 CDR1P51861 262 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 TUBB4BP68371 445 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 IFRD2Q12894 506 aaPredicted RBP7.1□□□□□ -1.27
USP16-203ENST00000399975 KLF1Q13351 362 aaPredicted RBP7.1□□□□□ -1.27
USP16-203ENST00000399975 DPYSL3Q14195 570 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 EFHC2Q5JST6 749 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 SEL1L2Q5TEA6 688 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 RNF43Q68DV7 783 aa7.1□□□□□ -1.27
USP16-203ENST00000399975 TXNRD3NBQ6F5E7 133 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms