RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 ATP8B1O43520 1251 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 CDH2P19022 906 aaPredicted RBP8.17□□□□□ -1.1
USP47-203ENST00000399455 CES1P23141 567 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 RPIAP49247 311 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 CYP2A13Q16696 494 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 HSP90AA5PQ58FG0 334 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 XKR4Q5GH76 650 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 SLC2A14Q8TDB8 520 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 PCDHGA4Q9Y5G9 962 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 A0A0G2JND7 137 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 TBC1D4O60343 1298 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 ATP5HO75947 161 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 TRPC1P48995 793 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 SESN3P58005 492 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 CCNG2Q16589 344 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 TFDP3Q5H9I0 405 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 DENND1CQ8IV53 801 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 STK40Q8N2I9 435 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 TOP6BLQ8N6T0 577 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 PHF21AQ96BD5 680 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 STAMBPL1Q96FJ0 436 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 TMEM237Q96Q45 408 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 PNKPQ96T60 521 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 RNF186Q9NXI6 227 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 ADA2Q9NZK5 511 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 KLHL3Q9UH77 587 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 TRHDEQ9UKU6 1024 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 DDX6P26196 483 aaKnown RBP eCLIP8.17□□□□□ -1.1
USP47-203ENST00000399455 RARRES1P49788 294 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 CDC16Q13042 620 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 INPP5AQ14642 412 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 SMAD1Q15797 465 aaKnown RBP8.17□□□□□ -1.1
USP47-203ENST00000399455 GSTA3Q16772 222 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 MPPE1Q53F39 396 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 FAXCQ5TGI0 409 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 KRT80Q6KB66 452 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 COLGALT2Q8IYK4 626 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 LPPQ93052 612 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 MYLPFQ96A32 169 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 MTMR9Q96QG7 549 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 RBBP8Q99708 897 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 ZNHIT2Q9UHR6 403 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 SLC27A6Q9Y2P4 619 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 UBIAD1Q9Y5Z9 338 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 DUOX1Q9NRD9 1551 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 TTC26A0AVF1 554 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 FAM107AO95990 144 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 LTFP02788 710 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 SERPINB8P50452 374 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 ZNF268Q14587 947 aaPredicted RBP8.17□□□□□ -1.1
USP47-203ENST00000399455 CACUL1Q86Y37 369 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 BBS7Q8IWZ6 715 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 ZNF248Q8NDW4 579 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 COG1Q8WTW3 980 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 FAM162AQ96A26 154 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 ZNF669Q96BR6 464 aaPredicted RBP8.17□□□□□ -1.1
USP47-203ENST00000399455 ATP1A3P13637 1013 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 IL10P22301 178 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 C17orf53Q8N3J3 647 aaPredicted RBP8.17□□□□□ -1.1
USP47-203ENST00000399455 ZNF507Q8TCN5 953 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 SPPL2BQ8TCT7 592 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 GRIN3AQ8TCU5 1115 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 ZFP14Q9HCL3 533 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 PSMC3IPQ9P2W1 217 aaPredicted RBP8.17□□□□□ -1.1
USP47-203ENST00000399455 NEU2Q9Y3R4 380 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 PCDHB11Q9Y5F2 797 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 LMO7Q8WWI1 1683 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 BCL9LQ86UU0 1499 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 GRM5P41594 1212 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 MKRN4PQ13434 485 aaPredicted RBP8.17□□□□□ -1.1
USP47-203ENST00000399455 ZDHHC20Q5W0Z9 365 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 CYP4Z1Q86W10 505 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 METTL16Q86W50 562 aaKnown RBP8.17□□□□□ -1.1
USP47-203ENST00000399455 FAM71DQ8N9W8 422 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 CBWD1Q9BRT8 395 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 POLR1EQ9GZS1 481 aaKnown RBP8.17□□□□□ -1.1
USP47-203ENST00000399455 IL17RBQ9NRM6 502 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 PTCH2Q9Y6C5 1203 aa8.17□□□□□ -1.1
USP47-203ENST00000399455 MGAT4DA6NG13 374 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 HACD1B0YJ81 288 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 NEDD8-MDP1E9PL57 170 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 CXCR2P25025 360 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 KCNK10P57789 538 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 SEC23AQ15436 765 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 WSCD1Q658N2 575 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 LRRC8EQ6NSJ5 796 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 ZNF544Q6NX49 715 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 TFAP2DQ7Z6R9 452 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 RFWD2Q8NHY2 731 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 TMCO1Q9UM00 188 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 TBC1D3DA0A087WVF3 549 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 TBC1D3IA0A087WXS9 549 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 TBC1D3EA0A087X179 549 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 TBC1D3KA0A087X1G2 549 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 TBC1D3FA6NER0 549 aaPredicted RBP8.16□□□□□ -1.1
USP47-203ENST00000399455 TBC1D3LB9A6J9 549 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 F8W810 466 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 TBC1D3HP0C7X1 549 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 NPR3P17342 541 aa8.16□□□□□ -1.1
USP47-203ENST00000399455 CYP2F1P24903 491 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms