RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 A0A0A0MRY4 1105 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 KBTBD13C9JR72 458 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 PPP1R12AO14974 1030 aaPredicted RBP18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 SEPT4O43236 478 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 MTSS1O43312 755 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 CA12O43570 354 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 RARBP10826 455 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 ALADP13716 330 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 TFE3P19532 575 aaPredicted RBP18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 CNTFP26441 200 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 RPA3P35244 121 aaPredicted RBP18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 TM4SF4P48230 202 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 TKTL1P51854 596 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 DSTYKQ6XUX3 929 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 CAPN12Q6ZSI9 719 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 CAND1Q86VP6 1230 aaKnown RBP18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 CCDC185Q8N715 623 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 PGBD4Q96DM1 585 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 UROC1Q96N76 676 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 SPATA13Q96N96 652 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 LPIN3Q9BQK8 851 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 HCRTO43612 131 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 SPAG7O75391 227 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 BANF1O75531 89 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 FOXN2P32314 431 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 SKIV2L2P42285 1042 aaKnown RBP18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 SERPINB9P50453 376 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 GBE1Q04446 702 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 DEUP1Q05D60 604 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 MGAT3Q09327 533 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 SLC10A2Q12908 348 aaPredicted RBP18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 DNAJC3Q13217 504 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 PTK7Q13308 1070 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 MAPRE1Q15691 268 aaKnown RBP18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 ARL13BQ3SXY8 428 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 GALNTL6Q49A17 601 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 ZNF449Q6P9G9 518 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 METTL23Q86XA0 190 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 RNF139Q8WU17 664 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 SMARCD1Q96GM5 515 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 ZFP42Q96MM3 310 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 EBNA1BP2Q99848 306 aaKnown RBP18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 ACBD6Q9BR61 282 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 CSNK1G1Q9HCP0 422 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 ARHGEF4Q9NR80 690 aa18.32■□□□□ 0.52
HLA-DQB1-204ENST00000399084 A0A1W2PPM1 405 aa18.31■□□□□ 0.52
HLA-DQB1-204ENST00000399084 ARL5CA6NH57 179 aa18.31■□□□□ 0.52
HLA-DQB1-204ENST00000399084 M0QYT0 321 aa18.31■□□□□ 0.52
HLA-DQB1-204ENST00000399084 RASSF9O75901 435 aa18.31■□□□□ 0.52
HLA-DQB1-204ENST00000399084 ATP5HO75947 161 aa18.31■□□□□ 0.52
HLA-DQB1-204ENST00000399084 KRT38O76015 456 aa18.31■□□□□ 0.52
HLA-DQB1-204ENST00000399084 ALDH1A1P00352 501 aa18.31■□□□□ 0.52
HLA-DQB1-204ENST00000399084 APOEP02649 317 aa18.31■□□□□ 0.52
HLA-DQB1-204ENST00000399084 CHRNA1P02708 482 aa18.31■□□□□ 0.52
HLA-DQB1-204ENST00000399084 CYP11A1P05108 521 aa18.31■□□□□ 0.52
HLA-DQB1-204ENST00000399084 SNRPAP09012 282 aaKnown RBP18.31■□□□□ 0.52
HLA-DQB1-204ENST00000399084 ODC1P11926 461 aa18.31■□□□□ 0.52
HLA-DQB1-204ENST00000399084 ADRA1BP35368 520 aa18.31■□□□□ 0.52
HLA-DQB1-204ENST00000399084 DAOAP59103 153 aa18.31■□□□□ 0.52
HLA-DQB1-204ENST00000399084 NAB1Q13506 487 aa18.31■□□□□ 0.52
HLA-DQB1-204ENST00000399084 PRKD1Q15139 912 aaPredicted RBP18.31■□□□□ 0.52
HLA-DQB1-204ENST00000399084 PARP6Q2NL67 630 aa18.31■□□□□ 0.52
HLA-DQB1-204ENST00000399084 KBTBD12Q3ZCT8 623 aa18.31■□□□□ 0.52
HLA-DQB1-204ENST00000399084 MDH1BQ5I0G3 518 aa18.31■□□□□ 0.52
HLA-DQB1-204ENST00000399084 CHSY1Q86X52 802 aa18.31■□□□□ 0.52
HLA-DQB1-204ENST00000399084 IGDCC3Q8IVU1 814 aa18.31■□□□□ 0.52
HLA-DQB1-204ENST00000399084 GSDMBQ8TAX9 411 aa18.31■□□□□ 0.52
HLA-DQB1-204ENST00000399084 CCDC110Q8TBZ0 833 aa18.31■□□□□ 0.52
HLA-DQB1-204ENST00000399084 GAD1Q99259 594 aa18.31■□□□□ 0.52
HLA-DQB1-204ENST00000399084 MKS1Q9NXB0 559 aa18.31■□□□□ 0.52
HLA-DQB1-204ENST00000399084 CAPN9O14815 690 aa18.3■□□□□ 0.52
HLA-DQB1-204ENST00000399084 EDF1O60869 148 aaKnown RBP18.3■□□□□ 0.52
HLA-DQB1-204ENST00000399084 ATP2C2O75185 946 aa18.3■□□□□ 0.52
HLA-DQB1-204ENST00000399084 IL1BP01584 269 aa18.3■□□□□ 0.52
HLA-DQB1-204ENST00000399084 GOT1P17174 413 aa18.3■□□□□ 0.52
HLA-DQB1-204ENST00000399084 AMPD1P23109 780 aa18.3■□□□□ 0.52
HLA-DQB1-204ENST00000399084 CRHR2Q13324 411 aa18.3■□□□□ 0.52
HLA-DQB1-204ENST00000399084 ANKRD20A2Q5SQ80 823 aa18.3■□□□□ 0.52
HLA-DQB1-204ENST00000399084 ANKRD20A1Q5TYW2 823 aa18.3■□□□□ 0.52
HLA-DQB1-204ENST00000399084 ANKRD20A3Q5VUR7 823 aa18.3■□□□□ 0.52
HLA-DQB1-204ENST00000399084 GDF6Q6KF10 455 aaPredicted RBP18.3■□□□□ 0.52
HLA-DQB1-204ENST00000399084 LVRNQ6Q4G3 990 aa18.3■□□□□ 0.52
HLA-DQB1-204ENST00000399084 FAM35AQ86V20 835 aa18.3■□□□□ 0.52
HLA-DQB1-204ENST00000399084 PACS2Q86VP3 889 aa18.3■□□□□ 0.52
HLA-DQB1-204ENST00000399084 TRIM42Q8IWZ5 723 aa18.3■□□□□ 0.52
HLA-DQB1-204ENST00000399084 C4orf33Q8N1A6 199 aa18.3■□□□□ 0.52
HLA-DQB1-204ENST00000399084 TRPV1Q8NER1 839 aa18.3■□□□□ 0.52
HLA-DQB1-204ENST00000399084 SIGLEC10Q96LC7 697 aa18.3■□□□□ 0.52
HLA-DQB1-204ENST00000399084 PAIP2Q9BPZ3 127 aaKnown RBP18.3■□□□□ 0.52
HLA-DQB1-204ENST00000399084 ADAM33Q9BZ11 813 aa18.3■□□□□ 0.52
HLA-DQB1-204ENST00000399084 CRTAC1Q9NQ79 661 aa18.3■□□□□ 0.52
HLA-DQB1-204ENST00000399084 KRT82Q9NSB4 513 aa18.3■□□□□ 0.52
HLA-DQB1-204ENST00000399084 PHTF1Q9UMS5 762 aa18.3■□□□□ 0.52
HLA-DQB1-204ENST00000399084 USH1CQ9Y6N9 552 aa18.3■□□□□ 0.52
HLA-DQB1-204ENST00000399084 A0A0U1RQF3 1178 aa18.29■□□□□ 0.52
HLA-DQB1-204ENST00000399084 FOXO6A8MYZ6 492 aa18.29■□□□□ 0.52
HLA-DQB1-204ENST00000399084 AP1G2O75843 785 aa18.29■□□□□ 0.52
HLA-DQB1-204ENST00000399084 CST5P28325 142 aaPredicted RBP18.29■□□□□ 0.52
HLA-DQB1-204ENST00000399084 CYP2C18P33260 490 aa18.29■□□□□ 0.52
HLA-DQB1-204ENST00000399084 MLH1P40692 756 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms