RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 CACNG3O60359 315 aa14.68□□□□□ -0.06
HLA-DQB1-202ENST00000399079 TSPAN3O60637 253 aa14.68□□□□□ -0.06
HLA-DQB1-202ENST00000399079 IGLV3-27P01718 113 aa14.68□□□□□ -0.06
HLA-DQB1-202ENST00000399079 APODP05090 189 aa14.68□□□□□ -0.06
HLA-DQB1-202ENST00000399079 CHRNB2P17787 502 aa14.68□□□□□ -0.06
HLA-DQB1-202ENST00000399079 STAT1P42224 750 aa14.68□□□□□ -0.06
HLA-DQB1-202ENST00000399079 GRIA2P42262 883 aa14.68□□□□□ -0.06
HLA-DQB1-202ENST00000399079 TBX4P57082 545 aa14.68□□□□□ -0.06
HLA-DQB1-202ENST00000399079 DMWDQ09019 674 aa14.68□□□□□ -0.06
HLA-DQB1-202ENST00000399079 DCAF6Q58WW2 860 aa14.68□□□□□ -0.06
HLA-DQB1-202ENST00000399079 FYB2Q5VWT5 728 aa14.68□□□□□ -0.06
HLA-DQB1-202ENST00000399079 OLFML1Q6UWY5 402 aa14.68□□□□□ -0.06
HLA-DQB1-202ENST00000399079 TOGARAM2Q6ZUX3 1019 aa14.68□□□□□ -0.06
HLA-DQB1-202ENST00000399079 TAC4Q86UU9 113 aa14.68□□□□□ -0.06
HLA-DQB1-202ENST00000399079 WDR35Q9P2L0 1181 aa14.68□□□□□ -0.06
HLA-DQB1-202ENST00000399079 A0A0A0MRY4 1105 aa14.67□□□□□ -0.06
HLA-DQB1-202ENST00000399079 TBC1D3BA6NDS4 549 aa14.67□□□□□ -0.06
HLA-DQB1-202ENST00000399079 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.67□□□□□ -0.06
HLA-DQB1-202ENST00000399079 SERPINC1P01008 464 aa14.67□□□□□ -0.06
HLA-DQB1-202ENST00000399079 PXNP49023 591 aaPredicted RBP14.67□□□□□ -0.06
HLA-DQB1-202ENST00000399079 FMO1Q01740 532 aa14.67□□□□□ -0.06
HLA-DQB1-202ENST00000399079 CDR2Q01850 454 aa14.67□□□□□ -0.06
HLA-DQB1-202ENST00000399079 NFKBIBQ15653 356 aa14.67□□□□□ -0.06
HLA-DQB1-202ENST00000399079 FILIP1LQ4L180 1135 aa14.67□□□□□ -0.06
HLA-DQB1-202ENST00000399079 NAA35Q5VZE5 725 aa14.67□□□□□ -0.06
HLA-DQB1-202ENST00000399079 HEATR6Q6AI08 1181 aaKnown RBP14.67□□□□□ -0.06
HLA-DQB1-202ENST00000399079 CACNA2D4Q7Z3S7 1137 aa14.67□□□□□ -0.06
HLA-DQB1-202ENST00000399079 ALYREFQ86V81 257 aaKnown RBP14.67□□□□□ -0.06
HLA-DQB1-202ENST00000399079 FAM217AQ8IXS0 508 aa14.67□□□□□ -0.06
HLA-DQB1-202ENST00000399079 DEFB106AQ8N104 65 aa14.67□□□□□ -0.06
HLA-DQB1-202ENST00000399079 IPO4Q8TEX9 1081 aaKnown RBP14.67□□□□□ -0.06
HLA-DQB1-202ENST00000399079 USP33Q8TEY7 942 aa14.67□□□□□ -0.06
HLA-DQB1-202ENST00000399079 NELL1Q92832 810 aa14.67□□□□□ -0.06
HLA-DQB1-202ENST00000399079 FCRL2Q96LA5 508 aaPredicted RBP14.67□□□□□ -0.06
HLA-DQB1-202ENST00000399079 SERPINB11Q96P15 392 aa14.67□□□□□ -0.06
HLA-DQB1-202ENST00000399079 XPO6Q96QU8 1125 aaKnown RBP14.67□□□□□ -0.06
HLA-DQB1-202ENST00000399079 CLEC4EQ9ULY5 219 aa14.67□□□□□ -0.06
HLA-DQB1-202ENST00000399079 DAAM1Q9Y4D1 1078 aa14.67□□□□□ -0.06
HLA-DQB1-202ENST00000399079 SYNJ2BP-COX16A0A087WUM0 186 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 GOLGA6L7A0A1B0GV03 622 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 CHURC1-FNTBB4DL54 471 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 ATG13O75143 517 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 TRUB2O95900 331 aaKnown RBP14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 PENKP01210 267 aaPredicted RBP14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 TIE1P35590 1138 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 KIR2DL1P43626 348 aaPredicted RBP14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 GABRB2P47870 512 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 MRE11P49959 708 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 RNASE9P60153 205 aaKnown RBP14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 NOMO3P69849 1222 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 SLC6A3Q01959 620 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 RING1Q06587 406 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 PPP2R5DQ14738 602 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 NR1I3Q14994 352 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 EFHC1Q5JVL4 640 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 ADGRF1Q5T601 910 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 RFWD3Q6PCD5 774 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 BEND5Q7L4P6 421 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 ERICH1Q86X53 443 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 ZNF677Q86XU0 584 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 CPXM2Q8N436 756 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 CCDC33Q8N5R6 958 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 TERB1Q8NA31 727 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 ZBTB44Q8NCP5 570 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 DDI1Q8WTU0 396 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 C18orf8Q96DM3 657 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 SLC39A13Q96H72 371 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 SLC2A13Q96QE2 648 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 ZSCAN32Q9NX65 697 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 COX16Q9P0S2 106 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 STOML2Q9UJZ1 356 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 TLR6Q9Y2C9 796 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 PROB1E7EW31 1015 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 HSF2BPO75031 334 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 PAPSS2O95340 614 aaPredicted RBP14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 LSM8O95777 96 aaKnown RBP14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 MOCS2O96007 188 aaPredicted RBP14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 IGLV3-25P01717 112 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 CYP1A1P04798 512 aaPredicted RBP14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 GLI1P08151 1106 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 CISD3P0C7P0 127 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 CHRM1P11229 460 aaPredicted RBP14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 SLC6A4P31645 630 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 FNTBP49356 437 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 DGKGP49619 791 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 SGSHP51688 502 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 SNX16P57768 344 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 FANCCQ00597 558 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 FAM133BQ5BKY9 247 aaKnown RBP14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 ZC3H12AQ5D1E8 599 aaKnown RBP14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 C10orf76Q5T2E6 689 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 NUGGCQ68CJ6 796 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 NADSYN1Q6IA69 706 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 GRAMD4Q6IC98 578 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 SYT13Q7L8C5 426 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 SLC26A9Q7LBE3 791 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 XYLT1Q86Y38 959 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 UNC45BQ8IWX7 931 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 ALLCQ8N6M5 410 aa14.66□□□□□ -0.06
HLA-DQB1-202ENST00000399079 IL17RCQ8NAC3 791 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms