RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 CPQQ9Y646 472 aa9.3□□□□□ -0.92
BRCC3-206ENST00000399042 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.29□□□□□ -0.92
BRCC3-206ENST00000399042 RCCD1A6NED2 376 aa9.29□□□□□ -0.92
BRCC3-206ENST00000399042 BTNL10A8MVZ5 291 aa9.29□□□□□ -0.92
BRCC3-206ENST00000399042 PJA2O43164 708 aa9.29□□□□□ -0.92
BRCC3-206ENST00000399042 MSI1O43347 362 aaKnown RBP9.29□□□□□ -0.92
BRCC3-206ENST00000399042 TADA3O75528 432 aa9.29□□□□□ -0.92
BRCC3-206ENST00000399042 PROSCO94903 275 aa9.29□□□□□ -0.92
BRCC3-206ENST00000399042 PTPN9P43378 593 aa9.29□□□□□ -0.92
BRCC3-206ENST00000399042 SLC11A2P49281 568 aa9.29□□□□□ -0.92
BRCC3-206ENST00000399042 ACAP1Q15027 740 aa9.29□□□□□ -0.92
BRCC3-206ENST00000399042 TRIP4Q15650 581 aaPredicted RBP9.29□□□□□ -0.92
BRCC3-206ENST00000399042 ZC3H12AQ5D1E8 599 aaKnown RBP9.29□□□□□ -0.92
BRCC3-206ENST00000399042 PRSS36Q5K4E3 855 aa9.29□□□□□ -0.92
BRCC3-206ENST00000399042 NUGGCQ68CJ6 796 aa9.29□□□□□ -0.92
BRCC3-206ENST00000399042 KLHDC10Q6PID8 442 aa9.29□□□□□ -0.92
BRCC3-206ENST00000399042 PEX26Q7Z412 305 aa9.29□□□□□ -0.92
BRCC3-206ENST00000399042 TMEM150AQ86TG1 271 aa9.29□□□□□ -0.92
BRCC3-206ENST00000399042 FAM131BQ86XD5 332 aa9.29□□□□□ -0.92
BRCC3-206ENST00000399042 ARID3BQ8IVW6 561 aaPredicted RBP9.29□□□□□ -0.92
BRCC3-206ENST00000399042 CCAR2Q8N163 923 aaKnown RBP9.29□□□□□ -0.92
BRCC3-206ENST00000399042 TDRD5Q8NAT2 981 aaKnown RBP9.29□□□□□ -0.92
BRCC3-206ENST00000399042 SMARCD2Q92925 531 aa9.29□□□□□ -0.92
BRCC3-206ENST00000399042 TRIM7Q9C029 511 aa9.29□□□□□ -0.92
BRCC3-206ENST00000399042 DCLK3Q9C098 648 aa9.29□□□□□ -0.92
BRCC3-206ENST00000399042 RNF38Q9H0F5 515 aa9.29□□□□□ -0.92
BRCC3-206ENST00000399042 SMOC2Q9H3U7 446 aa9.29□□□□□ -0.92
BRCC3-206ENST00000399042 POMKQ9H5K3 350 aa9.29□□□□□ -0.92
BRCC3-206ENST00000399042 ZFP14Q9HCL3 533 aa9.29□□□□□ -0.92
BRCC3-206ENST00000399042 GKN1Q9NS71 199 aa9.29□□□□□ -0.92
BRCC3-206ENST00000399042 TDP1Q9NUW8 608 aa9.29□□□□□ -0.92
BRCC3-206ENST00000399042 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.29□□□□□ -0.92
BRCC3-206ENST00000399042 THG1LQ9NWX6 298 aaKnown RBP9.29□□□□□ -0.92
BRCC3-206ENST00000399042 CFAP97Q9P2B7 532 aa9.29□□□□□ -0.92
BRCC3-206ENST00000399042 AMFRQ9UKV5 643 aa9.29□□□□□ -0.92
BRCC3-206ENST00000399042 TLR6Q9Y2C9 796 aa9.29□□□□□ -0.92
BRCC3-206ENST00000399042 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.29□□□□□ -0.92
BRCC3-206ENST00000399042 HBS1LQ9Y450 684 aaKnown RBP9.29□□□□□ -0.92
BRCC3-206ENST00000399042 MYH10P35580 1976 aa9.28□□□□□ -0.92
BRCC3-206ENST00000399042 SOBPA7XYQ1 873 aa9.28□□□□□ -0.92
BRCC3-206ENST00000399042 MBTPS2O43462 519 aa9.28□□□□□ -0.92
BRCC3-206ENST00000399042 BUB1BO60566 1050 aaPredicted RBP9.28□□□□□ -0.92
BRCC3-206ENST00000399042 PALMO75781 387 aa9.28□□□□□ -0.92
BRCC3-206ENST00000399042 OAS1P00973 400 aaKnown RBP9.28□□□□□ -0.92
BRCC3-206ENST00000399042 FYNP06241 537 aa9.28□□□□□ -0.92
BRCC3-206ENST00000399042 SLC1A1P43005 524 aa9.28□□□□□ -0.92
BRCC3-206ENST00000399042 DNA2P51530 1060 aa9.28□□□□□ -0.92
BRCC3-206ENST00000399042 KRT81Q14533 505 aa9.28□□□□□ -0.92
BRCC3-206ENST00000399042 COL19A1Q14993 1142 aa9.28□□□□□ -0.92
BRCC3-206ENST00000399042 LEXMQ3ZCV2 418 aa9.28□□□□□ -0.92
BRCC3-206ENST00000399042 EFHC2Q5JST6 749 aa9.28□□□□□ -0.92
BRCC3-206ENST00000399042 FAM78AQ5JUQ0 283 aa9.28□□□□□ -0.92
BRCC3-206ENST00000399042 ZNF569Q5MCW4 686 aa9.28□□□□□ -0.92
BRCC3-206ENST00000399042 SH3PXD2AQ5TCZ1 1133 aa9.28□□□□□ -0.92
BRCC3-206ENST00000399042 MSANTD2Q6P1R3 559 aa9.28□□□□□ -0.92
BRCC3-206ENST00000399042 MTSS1LQ765P7 747 aa9.28□□□□□ -0.92
BRCC3-206ENST00000399042 STRADAQ7RTN6 431 aa9.28□□□□□ -0.92
BRCC3-206ENST00000399042 BHLHA9Q7RTU4 235 aa9.28□□□□□ -0.92
BRCC3-206ENST00000399042 DENND1CQ8IV53 801 aa9.28□□□□□ -0.92
BRCC3-206ENST00000399042 CCDC117Q8IWD4 279 aaPredicted RBP9.28□□□□□ -0.92
BRCC3-206ENST00000399042 NPAS3Q8IXF0 933 aa9.28□□□□□ -0.92
BRCC3-206ENST00000399042 CELF5Q8N6W0 485 aaKnown RBP9.28□□□□□ -0.92
BRCC3-206ENST00000399042 UBL4BQ8N7F7 174 aa9.28□□□□□ -0.92
BRCC3-206ENST00000399042 ATP6V0D2Q8N8Y2 350 aa9.28□□□□□ -0.92
BRCC3-206ENST00000399042 ST13P5Q8NFI4 369 aaPredicted RBP9.28□□□□□ -0.92
BRCC3-206ENST00000399042 TRIM58Q8NG06 486 aa9.28□□□□□ -0.92
BRCC3-206ENST00000399042 TPCN2Q8NHX9 752 aa9.28□□□□□ -0.92
BRCC3-206ENST00000399042 SH3RF2Q8TEC5 729 aa9.28□□□□□ -0.92
BRCC3-206ENST00000399042 FNIP1Q8TF40 1166 aa9.28□□□□□ -0.92
BRCC3-206ENST00000399042 HSPH1Q92598 858 aa9.28□□□□□ -0.92
BRCC3-206ENST00000399042 PLD4Q96BZ4 506 aa9.28□□□□□ -0.92
BRCC3-206ENST00000399042 ZSWIM3Q96MP5 696 aa9.28□□□□□ -0.92
BRCC3-206ENST00000399042 SLC22A12Q96S37 553 aa9.28□□□□□ -0.92
BRCC3-206ENST00000399042 NPY6RQ99463 290 aa9.28□□□□□ -0.92
BRCC3-206ENST00000399042 DDX50Q9BQ39 737 aaKnown RBP9.28□□□□□ -0.92
BRCC3-206ENST00000399042 SIK2Q9H0K1 926 aa9.28□□□□□ -0.92
BRCC3-206ENST00000399042 ZNF510Q9Y2H8 683 aa9.28□□□□□ -0.92
BRCC3-206ENST00000399042 ZKSCAN5Q9Y2L8 839 aa9.28□□□□□ -0.92
BRCC3-206ENST00000399042 HYOU1Q9Y4L1 999 aa9.28□□□□□ -0.92
BRCC3-206ENST00000399042 ZFP37Q9Y6Q3 630 aaPredicted RBP9.28□□□□□ -0.92
BRCC3-206ENST00000399042 A0A0U1RQJ8 604 aa9.27□□□□□ -0.93
BRCC3-206ENST00000399042 TCRBV5S1A1TA0A578 114 aa9.27□□□□□ -0.93
BRCC3-206ENST00000399042 TYW5A2RUC4 315 aaKnown RBP9.27□□□□□ -0.93
BRCC3-206ENST00000399042 LEFTY2O00292 366 aa9.27□□□□□ -0.93
BRCC3-206ENST00000399042 SLC9A3R1O14745 358 aaPredicted RBP9.27□□□□□ -0.93
BRCC3-206ENST00000399042 SCAMP3O14828 347 aaKnown RBP9.27□□□□□ -0.93
BRCC3-206ENST00000399042 IRAK2O43187 625 aa9.27□□□□□ -0.93
BRCC3-206ENST00000399042 DAPK3O43293 454 aa9.27□□□□□ -0.93
BRCC3-206ENST00000399042 MOSPD3O75425 235 aa9.27□□□□□ -0.93
BRCC3-206ENST00000399042 MTA2O94776 668 aa9.27□□□□□ -0.93
BRCC3-206ENST00000399042 FTCDO95954 541 aa9.27□□□□□ -0.93
BRCC3-206ENST00000399042 KRT7P08729 469 aa9.27□□□□□ -0.93
BRCC3-206ENST00000399042 LAMP2P13473 410 aa9.27□□□□□ -0.93
BRCC3-206ENST00000399042 TFE3P19532 575 aaPredicted RBP9.27□□□□□ -0.93
BRCC3-206ENST00000399042 COMTP21964 271 aa9.27□□□□□ -0.93
BRCC3-206ENST00000399042 MIPP30301 263 aa9.27□□□□□ -0.93
BRCC3-206ENST00000399042 CORO1AP31146 461 aaKnown RBP9.27□□□□□ -0.93
BRCC3-206ENST00000399042 MAN1A1P33908 653 aa9.27□□□□□ -0.93
BRCC3-206ENST00000399042 CETN2P41208 172 aa9.27□□□□□ -0.93
BRCC3-206ENST00000399042 VIPR2P41587 438 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms