RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 FAM131BQ86XD5 332 aa14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 USP38Q8NB14 1042 aa14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 IL17RAQ96F46 866 aa14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 MED8Q96G25 268 aa14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 KLC4Q9NSK0 619 aa14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 UBP1Q9NZI7 540 aa14.65□□□□□ -0.06
PCDHA11-201ENST00000398640 SPATA31C2B4DYI2 1134 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 PRR23D1E9PI22 279 aaPredicted RBP14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 PSMD12O00232 456 aaPredicted RBP14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 VPS26AO75436 327 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 RASSF9O75901 435 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 PRR23D2P0DMB1 279 aaPredicted RBP14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 CRYBB1P53674 252 aaPredicted RBP14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 OVGP1Q12889 678 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 KHDRBS2Q5VWX1 349 aaKnown RBP14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 BBS7Q8IWZ6 715 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 LPCAT1Q8NF37 534 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 FICDQ9BVA6 458 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 UNKQ9C0B0 810 aaKnown RBP14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 LNPEPQ9UIQ6 1025 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 KIAA1257Q9ULG3 409 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 FOXN3O00409 490 aaPredicted RBP14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 KLHL2O95198 593 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 KRT16P08779 473 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 PON1P27169 355 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 HELQQ8TDG4 1101 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 UBIAD1Q9Y5Z9 338 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 SCAMP3O14828 347 aaKnown RBP14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 CYP7B1O75881 506 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 SERPINB10P48595 397 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 TOMM20Q15388 145 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 MRNIPQ6NTE8 343 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 FBXO22Q8NEZ5 403 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 TUBGCP3Q96CW5 907 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 CMTM5Q96DZ9 223 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 SEZ6LQ9BYH1 1024 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 PIK3CDO00329 1044 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 TUFMP49411 452 aaKnown RBP14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 TIGD7Q6NT04 549 aaPredicted RBP14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 LRIG3Q6UXM1 1119 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 CCDC60Q8IWA6 550 aaPredicted RBP14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 OLFM3Q96PB7 478 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 FAM111AQ96PZ2 611 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 KCNK16Q96T55 309 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 SYT15Q9BQS2 421 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 RERGLQ9H628 205 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 SRRDQ9UH36 339 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 EIF3LQ9Y262 564 aaKnown RBP14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 RWDD3Q9Y3V2 267 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 TPST1O60507 370 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 MAPTP10636 758 aaKnown RBP14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 CD44P16070 742 aaKnown RBP14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 SERPINB5P36952 375 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 FDFT1P37268 417 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 RARRES1P49788 294 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 CNTN1Q12860 1018 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 PCBP1Q15365 356 aaKnown RBP eCLIP14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 BOLA3Q53S33 107 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 ABRAQ8N0Z2 381 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 KRT78Q8N1N4 520 aa14.64□□□□□ -0.07
PCDHA11-201ENST00000398640 SPAG6O75602 509 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 CPSF4O95639 269 aaKnown RBP14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 PCYT1AP49585 367 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 HIRAP54198 1017 aaPredicted RBP14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 SLC29A2Q14542 456 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 AGAP9Q5VTM2 703 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 SIX5Q8N196 739 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 ZMAT2Q96NC0 199 aaKnown RBP14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 ZIM3Q96PE6 472 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 CLPBQ9H078 707 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 SPG21Q9NZD8 308 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 RPS6KB2Q9UBS0 482 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 DAB1O75553 588 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 STAU1O95793 577 aaKnown RBP14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 MSH3P20585 1137 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 KRT20P35900 424 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 MYL6P60660 151 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 KIAA1324Q6UXG2 1013 aaKnown RBP14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 UNC45BQ8IWX7 931 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 KCNB2Q92953 911 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 THAP11Q96EK4 314 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 CNDP1Q96KN2 507 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 ERP44Q9BS26 406 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 CDY1Q9Y6F8 540 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 LRRIQ3A6PVS8 624 aaPredicted RBP14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 ITGALP20701 1170 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 MLH1P40692 756 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 NUDT2P50583 147 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 LBX1P52954 281 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 DENND1BQ6P3S1 775 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 DLK2Q6UY11 383 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 CCNI2Q6ZMN8 369 aaPredicted RBP14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 VN1R5Q7Z5H4 357 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 MYO1HQ8N1T3 1032 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 CELF6Q96J87 481 aaKnown RBP14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 CCT8L2Q96SF2 557 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 PACSIN1Q9BY11 444 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 A0A1W2PQJ5 194 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 TBC1D3BA6NDS4 549 aa14.63□□□□□ -0.07
PCDHA11-201ENST00000398640 ADH1AP07327 375 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms