RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 TPMTP51580 245 aa12.63□□□□□ -0.39
TFF3-202ENST00000398431 ZNF132P52740 706 aa12.63□□□□□ -0.39
TFF3-202ENST00000398431 COPAP53621 1224 aa12.63□□□□□ -0.39
TFF3-202ENST00000398431 COG7P83436 770 aa12.63□□□□□ -0.39
TFF3-202ENST00000398431 EFEMP1Q12805 493 aa12.63□□□□□ -0.39
TFF3-202ENST00000398431 GRIK2Q13002 908 aa12.63□□□□□ -0.39
TFF3-202ENST00000398431 ZNF423Q2M1K9 1284 aa12.63□□□□□ -0.39
TFF3-202ENST00000398431 ZNF394Q53GI3 561 aa12.63□□□□□ -0.39
TFF3-202ENST00000398431 RAB41Q5JT25 222 aa12.63□□□□□ -0.39
TFF3-202ENST00000398431 SYCP2LQ5T4T6 812 aa12.63□□□□□ -0.39
TFF3-202ENST00000398431 DBX2Q6ZNG2 339 aa12.63□□□□□ -0.39
TFF3-202ENST00000398431 SLCO6A1Q86UG4 719 aa12.63□□□□□ -0.39
TFF3-202ENST00000398431 SLC4A11Q8NBS3 891 aa12.63□□□□□ -0.39
TFF3-202ENST00000398431 CADM4Q8NFZ8 388 aa12.63□□□□□ -0.39
TFF3-202ENST00000398431 C1orf216Q8TAB5 229 aa12.63□□□□□ -0.39
TFF3-202ENST00000398431 ADAMTS14Q8WXS8 1223 aa12.63□□□□□ -0.39
TFF3-202ENST00000398431 UBXN6Q9BZV1 441 aa12.63□□□□□ -0.39
TFF3-202ENST00000398431 NIF3L1Q9GZT8 377 aa12.63□□□□□ -0.39
TFF3-202ENST00000398431 IL21RQ9HBE5 538 aa12.63□□□□□ -0.39
TFF3-202ENST00000398431 ELOVL2Q9NXB9 296 aa12.63□□□□□ -0.39
TFF3-202ENST00000398431 SUSD2Q9UGT4 822 aa12.63□□□□□ -0.39
TFF3-202ENST00000398431 RASAL2Q9UJF2 1139 aa12.63□□□□□ -0.39
TFF3-202ENST00000398431 CFAP45Q9UL16 551 aa12.63□□□□□ -0.39
TFF3-202ENST00000398431 MAPK8IP1Q9UQF2 711 aa12.63□□□□□ -0.39
TFF3-202ENST00000398431 NFE2L3Q9Y4A8 694 aa12.63□□□□□ -0.39
TFF3-202ENST00000398431 CKAP5Q14008 2032 aa12.62□□□□□ -0.39
TFF3-202ENST00000398431 NUMA1Q14980 2115 aa12.62□□□□□ -0.39
TFF3-202ENST00000398431 ATRXP46100 2492 aa12.62□□□□□ -0.39
TFF3-202ENST00000398431 A0A1B0GTW7 788 aa12.62□□□□□ -0.39
TFF3-202ENST00000398431 NPC1O15118 1278 aa12.62□□□□□ -0.39
TFF3-202ENST00000398431 RHOBTB3O94955 611 aa12.62□□□□□ -0.39
TFF3-202ENST00000398431 KIF20AO95235 890 aa12.62□□□□□ -0.39
TFF3-202ENST00000398431 IGLV3-19P01714 112 aa12.62□□□□□ -0.39
TFF3-202ENST00000398431 C7P10643 843 aa12.62□□□□□ -0.39
TFF3-202ENST00000398431 NCAM1P13591 858 aa12.62□□□□□ -0.39
TFF3-202ENST00000398431 GNSP15586 552 aa12.62□□□□□ -0.39
TFF3-202ENST00000398431 NR2F2P24468 414 aa12.62□□□□□ -0.39
TFF3-202ENST00000398431 CORO1AP31146 461 aaKnown RBP12.62□□□□□ -0.39
TFF3-202ENST00000398431 RDXP35241 583 aaKnown RBP12.62□□□□□ -0.39
TFF3-202ENST00000398431 RAD23BP54727 409 aa12.62□□□□□ -0.39
TFF3-202ENST00000398431 ENPEPQ07075 957 aa12.62□□□□□ -0.39
TFF3-202ENST00000398431 COL9A2Q14055 689 aaPredicted RBP12.62□□□□□ -0.39
TFF3-202ENST00000398431 ZNF234Q14588 700 aa12.62□□□□□ -0.39
TFF3-202ENST00000398431 WDR45BQ5MNZ6 344 aa12.62□□□□□ -0.39
TFF3-202ENST00000398431 INTS8Q75QN2 995 aaKnown RBP12.62□□□□□ -0.39
TFF3-202ENST00000398431 BHLHA9Q7RTU4 235 aa12.62□□□□□ -0.39
TFF3-202ENST00000398431 TADA2BQ86TJ2 420 aa12.62□□□□□ -0.39
TFF3-202ENST00000398431 PIGZQ86VD9 579 aa12.62□□□□□ -0.39
TFF3-202ENST00000398431 DENND1CQ8IV53 801 aa12.62□□□□□ -0.39
TFF3-202ENST00000398431 FAM217AQ8IXS0 508 aa12.62□□□□□ -0.39
TFF3-202ENST00000398431 CPXM2Q8N436 756 aa12.62□□□□□ -0.39
TFF3-202ENST00000398431 PNPLA1Q8N8W4 532 aa12.62□□□□□ -0.39
TFF3-202ENST00000398431 SORCS1Q8WY21 1168 aa12.62□□□□□ -0.39
TFF3-202ENST00000398431 NDRG1Q92597 394 aaKnown RBP12.62□□□□□ -0.39
TFF3-202ENST00000398431 TATDN2Q93075 761 aa12.62□□□□□ -0.39
TFF3-202ENST00000398431 HEXIM2Q96MH2 286 aaKnown RBP12.62□□□□□ -0.39
TFF3-202ENST00000398431 DCLK3Q9C098 648 aa12.62□□□□□ -0.39
TFF3-202ENST00000398431 TMEM8AQ9HCN3 771 aa12.62□□□□□ -0.39
TFF3-202ENST00000398431 USP25Q9UHP3 1055 aa12.62□□□□□ -0.39
TFF3-202ENST00000398431 BAHCC1Q9P281 2608 aa12.61□□□□□ -0.39
TFF3-202ENST00000398431 FAM237AA0A1B0GTK4 181 aa12.61□□□□□ -0.39
TFF3-202ENST00000398431 SLC12A8A0AV02 714 aa12.61□□□□□ -0.39
TFF3-202ENST00000398431 TULP2O00295 520 aa12.61□□□□□ -0.39
TFF3-202ENST00000398431 MYL1P05976 194 aa12.61□□□□□ -0.39
TFF3-202ENST00000398431 FTH1P19P0C7X4 201 aa12.61□□□□□ -0.39
TFF3-202ENST00000398431 PRKCHP24723 683 aa12.61□□□□□ -0.39
TFF3-202ENST00000398431 SCAPQ12770 1279 aa12.61□□□□□ -0.39
TFF3-202ENST00000398431 DPYDQ12882 1025 aa12.61□□□□□ -0.39
TFF3-202ENST00000398431 ADAM9Q13443 819 aa12.61□□□□□ -0.39
TFF3-202ENST00000398431 STARD3Q14849 445 aa12.61□□□□□ -0.39
TFF3-202ENST00000398431 TRIP4Q15650 581 aaPredicted RBP12.61□□□□□ -0.39
TFF3-202ENST00000398431 ZCWPW2Q504Y3 356 aa12.61□□□□□ -0.39
TFF3-202ENST00000398431 DCAF12L1Q5VU92 463 aa12.61□□□□□ -0.39
TFF3-202ENST00000398431 ARHGAP17Q68EM7 881 aa12.61□□□□□ -0.39
TFF3-202ENST00000398431 PM20D1Q6GTS8 502 aa12.61□□□□□ -0.39
TFF3-202ENST00000398431 CCNI2Q6ZMN8 369 aaPredicted RBP12.61□□□□□ -0.39
TFF3-202ENST00000398431 GLRX5Q86SX6 157 aa12.61□□□□□ -0.39
TFF3-202ENST00000398431 PROSER1Q86XN7 944 aa12.61□□□□□ -0.39
TFF3-202ENST00000398431 NAXDQ8IW45 347 aa12.61□□□□□ -0.39
TFF3-202ENST00000398431 FAM186BQ8IYM0 893 aa12.61□□□□□ -0.39
TFF3-202ENST00000398431 ZCCHC9Q8N567 271 aaKnown RBP12.61□□□□□ -0.39
TFF3-202ENST00000398431 SIPA1Q96FS4 1042 aa12.61□□□□□ -0.39
TFF3-202ENST00000398431 TMEM176AQ96HP8 235 aa12.61□□□□□ -0.39
TFF3-202ENST00000398431 CDK5RAP1Q96SZ6 601 aaKnown RBP12.61□□□□□ -0.39
TFF3-202ENST00000398431 IMPG2Q9BZV3 1241 aa12.61□□□□□ -0.39
TFF3-202ENST00000398431 ZDHHC5Q9C0B5 715 aa12.61□□□□□ -0.39
TFF3-202ENST00000398431 MMRN2Q9H8L6 949 aa12.61□□□□□ -0.39
TFF3-202ENST00000398431 MARCH2Q9P0N8 246 aa12.61□□□□□ -0.39
TFF3-202ENST00000398431 PCOLCE2Q9UKZ9 415 aa12.61□□□□□ -0.39
TFF3-202ENST00000398431 LHX6Q9UPM6 363 aa12.61□□□□□ -0.39
TFF3-202ENST00000398431 SLCO1B1Q9Y6L6 691 aa12.61□□□□□ -0.39
TFF3-202ENST00000398431 CABIN1Q9Y6J0 2220 aa12.61□□□□□ -0.39
TFF3-202ENST00000398431 ADAMTS20P59510 1910 aa12.6□□□□□ -0.39
TFF3-202ENST00000398431 PTPRBP23467 1997 aa12.6□□□□□ -0.39
TFF3-202ENST00000398431 BCAT2O15382 392 aaPredicted RBP12.6□□□□□ -0.39
TFF3-202ENST00000398431 TRIM21P19474 475 aaKnown RBP12.6□□□□□ -0.39
TFF3-202ENST00000398431 OXTRP30559 389 aa12.6□□□□□ -0.39
TFF3-202ENST00000398431 GTF2H1P32780 548 aa12.6□□□□□ -0.39
TFF3-202ENST00000398431 PSMC2P35998 433 aaKnown RBP12.6□□□□□ -0.39
TFF3-202ENST00000398431 YWHAGP61981 247 aaKnown RBP eCLIP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms