RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 RAB6CQ9H0N0 254 aa16.52■□□□□ 0.23
CHMP1A-201ENST00000397901 S100A14Q9HCY8 104 aa16.52■□□□□ 0.23
CHMP1A-201ENST00000397901 RAB6BQ9NRW1 208 aa16.52■□□□□ 0.23
CHMP1A-201ENST00000397901 SPATA7Q9P0W8 599 aa16.52■□□□□ 0.23
CHMP1A-201ENST00000397901 SLC7A8Q9UHI5 535 aa16.52■□□□□ 0.23
CHMP1A-201ENST00000397901 USP18Q9UMW8 372 aa16.52■□□□□ 0.23
CHMP1A-201ENST00000397901 ARHGAP10A1A4S6 786 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 PIK3R2O00459 728 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 CYB561D2O14569 222 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 MAP3K6O95382 1288 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 CLPTM1O96005 669 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 KRT19P08727 400 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 SRGAP2CP0DJJ0 459 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 PORP16435 677 aaPredicted RBP16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 TSHRP16473 764 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 AP3M2P53677 418 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 KDSRQ06136 332 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 BST1Q10588 318 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 KCNJ11Q14654 390 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 TMEM132BQ14DG7 1078 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 HSF5Q4G112 596 aaPredicted RBP16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 TTC39BQ5VTQ0 682 aaPredicted RBP16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 CES4AQ5XG92 561 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 KYAT3Q6YP21 454 aaKnown RBP16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 TRIM67Q6ZTA4 783 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 CCDC80Q76M96 950 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 SLC26A11Q86WA9 606 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 CDR2LQ86X02 465 aaPredicted RBP16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 RBM15BQ8NDT2 890 aaKnown RBP16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 KLRG1Q96E93 195 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 ACAP3Q96P50 834 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 PEBP4Q96S96 227 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 TMEM134Q9H6X4 195 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 INIPQ9NRY2 104 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 SSC5DA1L4H1 1573 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 C19orf81C9J6K1 198 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 UGT1A9O60656 530 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 TRUB2O95900 331 aaKnown RBP16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 TFAP2AP05549 437 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 FUT4P22083 530 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 CDH6P55285 790 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 DLG1Q12959 904 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 DPH6Q7L8W6 267 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 PRPF31Q8WWY3 499 aaKnown RBP16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 ZFRQ96KR1 1074 aaKnown RBP16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 THTPAQ9BU02 230 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 RBM38Q9H0Z9 239 aaKnown RBP16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 XYLT2Q9H1B5 865 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 UGT1A7Q9HAW7 530 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 UGT1A10Q9HAW8 530 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 UGT1A8Q9HAW9 530 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 ZNF711Q9Y462 761 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 TTLL3Q9Y4R7 772 aa16.51■□□□□ 0.23
CHMP1A-201ENST00000397901 C15orf38-AP3S2A0A0A6YYH1 394 aa16.5■□□□□ 0.23
CHMP1A-201ENST00000397901 TOM1L1O75674 476 aa16.5■□□□□ 0.23
CHMP1A-201ENST00000397901 AQP4P55087 323 aa16.5■□□□□ 0.23
CHMP1A-201ENST00000397901 YWHAZP63104 245 aaKnown RBP16.5■□□□□ 0.23
CHMP1A-201ENST00000397901 GSTM4Q03013 218 aa16.5■□□□□ 0.23
CHMP1A-201ENST00000397901 CHI3L2Q15782 390 aa16.5■□□□□ 0.23
CHMP1A-201ENST00000397901 LRRC8BQ6P9F7 803 aa16.5■□□□□ 0.23
CHMP1A-201ENST00000397901 KLHL35Q6PF15 583 aa16.5■□□□□ 0.23
CHMP1A-201ENST00000397901 CATSPERGQ6ZRH7 1159 aa16.5■□□□□ 0.23
CHMP1A-201ENST00000397901 ARPINQ7Z6K5 226 aa16.5■□□□□ 0.23
CHMP1A-201ENST00000397901 CMASQ8NFW8 434 aaPredicted RBP16.5■□□□□ 0.23
CHMP1A-201ENST00000397901 FNIP1Q8TF40 1166 aa16.5■□□□□ 0.23
CHMP1A-201ENST00000397901 BTBD9Q96Q07 612 aa16.5■□□□□ 0.23
CHMP1A-201ENST00000397901 MRPL4Q9BYD3 311 aaKnown RBP16.5■□□□□ 0.23
CHMP1A-201ENST00000397901 SPECC1L-ADORA2AF8WAN1 911 aa16.5■□□□□ 0.23
CHMP1A-201ENST00000397901 MSCO60682 206 aa16.5■□□□□ 0.23
CHMP1A-201ENST00000397901 NADK2Q4G0N4 442 aa16.5■□□□□ 0.23
CHMP1A-201ENST00000397901 ZPBP2Q6X784 338 aa16.5■□□□□ 0.23
CHMP1A-201ENST00000397901 MPHOSPH6Q99547 160 aaKnown RBP16.5■□□□□ 0.23
CHMP1A-201ENST00000397901 TRIM56Q9BRZ2 755 aaKnown RBP16.5■□□□□ 0.23
CHMP1A-201ENST00000397901 PLK2Q9NYY3 685 aa16.5■□□□□ 0.23
CHMP1A-201ENST00000397901 HMGXB4Q9UGU5 601 aa16.5■□□□□ 0.23
CHMP1A-201ENST00000397901 TRIM43BA6NCK2 446 aa16.49■□□□□ 0.23
CHMP1A-201ENST00000397901 E9PBE3 544 aa16.49■□□□□ 0.23
CHMP1A-201ENST00000397901 OGTO15294 1046 aa16.49■□□□□ 0.23
CHMP1A-201ENST00000397901 KCNN4O15554 427 aa16.49■□□□□ 0.23
CHMP1A-201ENST00000397901 PDE5AO76074 875 aa16.49■□□□□ 0.23
CHMP1A-201ENST00000397901 HOXC6P09630 235 aa16.49■□□□□ 0.23
CHMP1A-201ENST00000397901 MTTPP55157 894 aa16.49■□□□□ 0.23
CHMP1A-201ENST00000397901 MRPS5P82675 430 aaKnown RBP16.49■□□□□ 0.23
CHMP1A-201ENST00000397901 NOMO1Q15155 1222 aa16.49■□□□□ 0.23
CHMP1A-201ENST00000397901 CDO1Q16878 200 aa16.49■□□□□ 0.23
CHMP1A-201ENST00000397901 LRRC36Q1X8D7 754 aa16.49■□□□□ 0.23
CHMP1A-201ENST00000397901 CROCCP3Q8IVE0 287 aa16.49■□□□□ 0.23
CHMP1A-201ENST00000397901 BBS5Q8N3I7 341 aa16.49■□□□□ 0.23
CHMP1A-201ENST00000397901 E2F7Q96AV8 911 aa16.49■□□□□ 0.23
CHMP1A-201ENST00000397901 TWNKQ96RR1 684 aa16.49■□□□□ 0.23
CHMP1A-201ENST00000397901 TSPYL2Q9H2G4 693 aaPredicted RBP16.49■□□□□ 0.23
CHMP1A-201ENST00000397901 RSAD1Q9HA92 442 aa16.49■□□□□ 0.23
CHMP1A-201ENST00000397901 KCNK4Q9NYG8 393 aa16.49■□□□□ 0.23
CHMP1A-201ENST00000397901 ZC3H7BQ9UGR2 993 aaKnown RBP16.49■□□□□ 0.23
CHMP1A-201ENST00000397901 PLLPQ9Y342 182 aa16.49■□□□□ 0.23
CHMP1A-201ENST00000397901 SIP14410 1827 aa16.49■□□□□ 0.23
CHMP1A-201ENST00000397901 LOC285556D6RIA3 1793 aa16.49■□□□□ 0.23
CHMP1A-201ENST00000397901 CAPN14A8MX76 684 aa16.48■□□□□ 0.23
CHMP1A-201ENST00000397901 TXNDC9O14530 226 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms