RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 PRRT4C9JH25 899 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 NEDD8-MDP1E9PL57 170 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 IKBKBO14920 756 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 NPC1O15118 1278 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 STX6O43752 255 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 GJB3O75712 270 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 TBX18O95935 607 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 CAPNS1P04632 268 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 CISD3P0C7P0 127 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 IRF1P10914 325 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 TYRP14679 529 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 TRIM21P19474 475 aaKnown RBP9.23□□□□□ -0.93
CAPN3-208ENST00000397204 CASP4P49662 377 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 PGFP49763 221 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 MAP3K7CLP57077 242 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 FAM193AP78312 1265 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 E2F5Q15329 346 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 ZNF699Q32M78 642 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 EGFLAMQ63HQ2 1017 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 KIAA1211LQ6NV74 962 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 SHC4Q6S5L8 630 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 SLC9A9Q8IVB4 645 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 HOMEZQ8IX15 550 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 RGL4Q8IZJ4 473 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 CHCHD4Q8N4Q1 142 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 ZMIZ2Q8NF64 920 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 CADM4Q8NFZ8 388 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 PLEKHO2Q8TD55 490 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 SLC2A14Q8TDB8 520 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 MRGPRX1Q96LB2 322 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 HSPA12BQ96MM6 686 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 ACOX2Q99424 681 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 HNRNPABQ99729 332 aaKnown RBP9.23□□□□□ -0.93
CAPN3-208ENST00000397204 SDCBP2Q9H190 292 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 SLC39A2Q9NP94 309 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 KRT82Q9NSB4 513 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 DNMT3LQ9UJW3 386 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 CYP8B1Q9UNU6 501 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 ZNF510Q9Y2H8 683 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 SLC27A6Q9Y2P4 619 aa9.23□□□□□ -0.93
CAPN3-208ENST00000397204 ATXN2Q99700 1313 aaKnown RBP9.23□□□□□ -0.93
CAPN3-208ENST00000397204 IGSF10Q6WRI0 2623 aa9.22□□□□□ -0.93
CAPN3-208ENST00000397204 KNTC1P50748 2209 aa9.22□□□□□ -0.93
CAPN3-208ENST00000397204 LRRIQ3A6PVS8 624 aaPredicted RBP9.22□□□□□ -0.93
CAPN3-208ENST00000397204 POLR2DO15514 142 aaKnown RBP9.22□□□□□ -0.93
CAPN3-208ENST00000397204 SH3BP5O60239 455 aa9.22□□□□□ -0.93
CAPN3-208ENST00000397204 BEST1O76090 585 aa9.22□□□□□ -0.93
CAPN3-208ENST00000397204 VNN1O95497 513 aa9.22□□□□□ -0.93
CAPN3-208ENST00000397204 YEATS4O95619 227 aa9.22□□□□□ -0.93
CAPN3-208ENST00000397204 FAM200BP0CF97 657 aa9.22□□□□□ -0.93
CAPN3-208ENST00000397204 PDIA4P13667 645 aaKnown RBP9.22□□□□□ -0.93
CAPN3-208ENST00000397204 CD6P30203 668 aa9.22□□□□□ -0.93
CAPN3-208ENST00000397204 OXTRP30559 389 aa9.22□□□□□ -0.93
CAPN3-208ENST00000397204 DGKGP49619 791 aa9.22□□□□□ -0.93
CAPN3-208ENST00000397204 NDST1P52848 882 aa9.22□□□□□ -0.93
CAPN3-208ENST00000397204 RING1Q06587 406 aa9.22□□□□□ -0.93
CAPN3-208ENST00000397204 NNTQ13423 1086 aa9.22□□□□□ -0.93
CAPN3-208ENST00000397204 COL9A2Q14055 689 aaPredicted RBP9.22□□□□□ -0.93
CAPN3-208ENST00000397204 STARD3Q14849 445 aa9.22□□□□□ -0.93
CAPN3-208ENST00000397204 PLEKHG6Q3KR16 790 aa9.22□□□□□ -0.93
CAPN3-208ENST00000397204 TPGS1Q6ZTW0 290 aa9.22□□□□□ -0.93
CAPN3-208ENST00000397204 TADA2BQ86TJ2 420 aa9.22□□□□□ -0.93
CAPN3-208ENST00000397204 C12orf29Q8N999 325 aa9.22□□□□□ -0.93
CAPN3-208ENST00000397204 ADAMTS14Q8WXS8 1223 aa9.22□□□□□ -0.93
CAPN3-208ENST00000397204 DNASE2BQ8WZ79 361 aa9.22□□□□□ -0.93
CAPN3-208ENST00000397204 CYFIP2Q96F07 1278 aa9.22□□□□□ -0.93
CAPN3-208ENST00000397204 DCLK3Q9C098 648 aa9.22□□□□□ -0.93
CAPN3-208ENST00000397204 DNAI2Q9GZS0 605 aa9.22□□□□□ -0.93
CAPN3-208ENST00000397204 PNPLA8Q9NP80 782 aa9.22□□□□□ -0.93
CAPN3-208ENST00000397204 FSCN3Q9NQT6 498 aa9.22□□□□□ -0.93
CAPN3-208ENST00000397204 ITM2CQ9NQX7 267 aa9.22□□□□□ -0.93
CAPN3-208ENST00000397204 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.22□□□□□ -0.93
CAPN3-208ENST00000397204 CACNA2D2Q9NY47 1150 aa9.22□□□□□ -0.93
CAPN3-208ENST00000397204 PCDHA5Q9Y5H7 936 aa9.22□□□□□ -0.93
CAPN3-208ENST00000397204 PTPRDP23468 1912 aa9.22□□□□□ -0.93
CAPN3-208ENST00000397204 APC2O95996 2303 aa9.22□□□□□ -0.93
CAPN3-208ENST00000397204 CELSR3Q9NYQ7 3312 aa9.22□□□□□ -0.93
CAPN3-208ENST00000397204 CABIN1Q9Y6J0 2220 aa9.21□□□□□ -0.93
CAPN3-208ENST00000397204 MYO16Q9Y6X6 1858 aa9.21□□□□□ -0.93
CAPN3-208ENST00000397204 A0A1B0GTW7 788 aa9.21□□□□□ -0.94
CAPN3-208ENST00000397204 WASH3PC4AMC7 463 aa9.21□□□□□ -0.94
CAPN3-208ENST00000397204 HHLA1C9JL84 531 aa9.21□□□□□ -0.94
CAPN3-208ENST00000397204 TAF4O00268 1085 aa9.21□□□□□ -0.94
CAPN3-208ENST00000397204 PDXKO00764 312 aa9.21□□□□□ -0.94
CAPN3-208ENST00000397204 CLSTN1O94985 981 aa9.21□□□□□ -0.94
CAPN3-208ENST00000397204 ASS1P00966 412 aaKnown RBP9.21□□□□□ -0.94
CAPN3-208ENST00000397204 RARGP13631 454 aa9.21□□□□□ -0.94
CAPN3-208ENST00000397204 CCDC130P13994 396 aa9.21□□□□□ -0.94
CAPN3-208ENST00000397204 ACO1P21399 889 aaKnown RBP9.21□□□□□ -0.94
CAPN3-208ENST00000397204 CHKAP35790 457 aa9.21□□□□□ -0.94
CAPN3-208ENST00000397204 COG7P83436 770 aa9.21□□□□□ -0.94
CAPN3-208ENST00000397204 ENPP2Q13822 863 aa9.21□□□□□ -0.94
CAPN3-208ENST00000397204 ACAP1Q15027 740 aa9.21□□□□□ -0.94
CAPN3-208ENST00000397204 ZACNQ401N2 412 aa9.21□□□□□ -0.94
CAPN3-208ENST00000397204 C10orf120Q5SQS8 335 aa9.21□□□□□ -0.94
CAPN3-208ENST00000397204 SCARA5Q6ZMJ2 495 aa9.21□□□□□ -0.94
CAPN3-208ENST00000397204 TOGARAM2Q6ZUX3 1019 aa9.21□□□□□ -0.94
CAPN3-208ENST00000397204 SV2AQ7L0J3 742 aa9.21□□□□□ -0.94
CAPN3-208ENST00000397204 GLRX5Q86SX6 157 aa9.21□□□□□ -0.94
CAPN3-208ENST00000397204 PROSER1Q86XN7 944 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms