RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 PCDHGC3Q9UN70 934 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 GPR179Q6PRD1 2367 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 PIK3R2O00459 728 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 LATS1O95835 1130 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 CYBBP04839 570 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 KRT9P35527 623 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 SEC13P55735 322 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 SNX16P57768 344 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 KDSRQ06136 332 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 FILIP1LQ4L180 1135 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 C2orf27AQ580R0 203 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 FKBP15Q5T1M5 1219 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 HEATR6Q6AI08 1181 aaKnown RBP15.2■□□□□ 0.02
SEC13-208ENST00000397109 GRAMD4Q6IC98 578 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 BEND5Q7L4P6 421 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 TMEM110Q86TL2 294 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 DENND1CQ8IV53 801 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 SCUBE3Q8IX30 993 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 FAM71AQ8IYT1 594 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 CPXM2Q8N436 756 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 TERB1Q8NA31 727 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 RUBCNQ92622 972 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 NOX5Q96PH1 765 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 LHX5Q9H2C1 402 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 ACP6Q9NPH0 428 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 PLCB1Q9NQ66 1216 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 DNAJC17Q9NVM6 304 aaKnown RBP15.2■□□□□ 0.02
SEC13-208ENST00000397109 SFMBT1Q9UHJ3 866 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 MMP17Q9ULZ9 603 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 CEP83Q9Y592 693 aa15.2■□□□□ 0.02
SEC13-208ENST00000397109 GVINP1Q7Z2Y8 2422 aa15.19■□□□□ 0.02
SEC13-208ENST00000397109 APBB3O95704 486 aa15.19■□□□□ 0.02
SEC13-208ENST00000397109 DMWDQ09019 674 aa15.19■□□□□ 0.02
SEC13-208ENST00000397109 RAPGEF1Q13905 1077 aa15.19■□□□□ 0.02
SEC13-208ENST00000397109 DRAP1Q14919 205 aaPredicted RBP15.19■□□□□ 0.02
SEC13-208ENST00000397109 DPY19L2P1Q6NXN4 242 aa15.19■□□□□ 0.02
SEC13-208ENST00000397109 TRMT11Q7Z4G4 463 aaKnown RBP15.19■□□□□ 0.02
SEC13-208ENST00000397109 UNC45BQ8IWX7 931 aa15.19■□□□□ 0.02
SEC13-208ENST00000397109 KIAA1524Q8TCG1 905 aa15.19■□□□□ 0.02
SEC13-208ENST00000397109 CLEC4CQ8WTT0 213 aa15.19■□□□□ 0.02
SEC13-208ENST00000397109 FAM149B1Q96BN6 582 aa15.19■□□□□ 0.02
SEC13-208ENST00000397109 ERGIC2Q96RQ1 377 aa15.19■□□□□ 0.02
SEC13-208ENST00000397109 LSM14BQ9BX40 385 aaKnown RBP15.19■□□□□ 0.02
SEC13-208ENST00000397109 AJAP1Q9UKB5 411 aaPredicted RBP15.19■□□□□ 0.02
SEC13-208ENST00000397109 SMG5Q9UPR3 1016 aaKnown RBP15.19■□□□□ 0.02
SEC13-208ENST00000397109 DAAM1Q9Y4D1 1078 aa15.19■□□□□ 0.02
SEC13-208ENST00000397109 PENKP01210 267 aaPredicted RBP15.18■□□□□ 0.02
SEC13-208ENST00000397109 NCAM1P13591 858 aa15.18■□□□□ 0.02
SEC13-208ENST00000397109 UCHL3P15374 230 aa15.18■□□□□ 0.02
SEC13-208ENST00000397109 TIE1P35590 1138 aa15.18■□□□□ 0.02
SEC13-208ENST00000397109 KIR2DL1P43626 348 aaPredicted RBP15.18■□□□□ 0.02
SEC13-208ENST00000397109 MESP2Q0VG99 397 aa15.18■□□□□ 0.02
SEC13-208ENST00000397109 PDCLQ13371 301 aa15.18■□□□□ 0.02
SEC13-208ENST00000397109 NR1I3Q14994 352 aa15.18■□□□□ 0.02
SEC13-208ENST00000397109 EOGTQ5NDL2 527 aa15.18■□□□□ 0.02
SEC13-208ENST00000397109 VSTM4Q8IW00 320 aa15.18■□□□□ 0.02
SEC13-208ENST00000397109 FAM217AQ8IXS0 508 aa15.18■□□□□ 0.02
SEC13-208ENST00000397109 NAP1L5Q96NT1 182 aaPredicted RBP15.18■□□□□ 0.02
SEC13-208ENST00000397109 STK33Q9BYT3 514 aa15.18■□□□□ 0.02
SEC13-208ENST00000397109 FBXO10Q9UK96 956 aa15.18■□□□□ 0.02
SEC13-208ENST00000397109 STARD13Q9Y3M8 1113 aa15.18■□□□□ 0.02
SEC13-208ENST00000397109 FHOD1Q9Y613 1164 aa15.18■□□□□ 0.02
SEC13-208ENST00000397109 MYO15AQ9UKN7 3530 aa15.18■□□□□ 0.02
SEC13-208ENST00000397109 KIAA1549LQ6ZVL6 1849 aa15.18■□□□□ 0.02
SEC13-208ENST00000397109 USP34Q70CQ2 3546 aa15.17■□□□□ 0.02
SEC13-208ENST00000397109 A0A1W2PQC6 194 aa15.17■□□□□ 0.02
SEC13-208ENST00000397109 E5RJQ4 531 aa15.17■□□□□ 0.02
SEC13-208ENST00000397109 CAPN9O14815 690 aa15.17■□□□□ 0.02
SEC13-208ENST00000397109 AXIN1O15169 862 aa15.17■□□□□ 0.02
SEC13-208ENST00000397109 HRO43593 1189 aa15.17■□□□□ 0.02
SEC13-208ENST00000397109 DGKGP49619 791 aa15.17■□□□□ 0.02
SEC13-208ENST00000397109 DGKEP52429 567 aa15.17■□□□□ 0.02
SEC13-208ENST00000397109 RING1Q06587 406 aa15.17■□□□□ 0.02
SEC13-208ENST00000397109 NNTQ13423 1086 aa15.17■□□□□ 0.02
SEC13-208ENST00000397109 SIM2Q14190 667 aaPredicted RBP15.17■□□□□ 0.02
SEC13-208ENST00000397109 C10orf76Q5T2E6 689 aa15.17■□□□□ 0.02
SEC13-208ENST00000397109 NUGGCQ68CJ6 796 aa15.17■□□□□ 0.02
SEC13-208ENST00000397109 SLC47A2Q86VL8 602 aa15.17■□□□□ 0.02
SEC13-208ENST00000397109 CCDC33Q8N5R6 958 aa15.17■□□□□ 0.02
SEC13-208ENST00000397109 IL17RCQ8NAC3 791 aa15.17■□□□□ 0.02
SEC13-208ENST00000397109 TSTD1Q8NFU3 115 aa15.17■□□□□ 0.02
SEC13-208ENST00000397109 PPP1R13BQ96KQ4 1090 aa15.17■□□□□ 0.02
SEC13-208ENST00000397109 SERPINB11Q96P15 392 aa15.17■□□□□ 0.02
SEC13-208ENST00000397109 HHIPQ96QV1 700 aa15.17■□□□□ 0.02
SEC13-208ENST00000397109 HINFPQ9BQA5 517 aa15.17■□□□□ 0.02
SEC13-208ENST00000397109 NAA15Q9BXJ9 866 aaKnown RBP15.17■□□□□ 0.02
SEC13-208ENST00000397109 IRX2Q9BZI1 471 aaPredicted RBP15.17■□□□□ 0.02
SEC13-208ENST00000397109 POPDC2Q9HBU9 364 aa15.17■□□□□ 0.02
SEC13-208ENST00000397109 SPTLC3Q9NUV7 552 aa15.17■□□□□ 0.02
SEC13-208ENST00000397109 NCDNQ9UBB6 729 aa15.17■□□□□ 0.02
SEC13-208ENST00000397109 EBF1Q9UH73 591 aa15.17■□□□□ 0.02
SEC13-208ENST00000397109 CYTH4Q9UIA0 394 aa15.17■□□□□ 0.02
SEC13-208ENST00000397109 STOML2Q9UJZ1 356 aa15.17■□□□□ 0.02
SEC13-208ENST00000397109 SIK3Q9Y2K2 1263 aa15.17■□□□□ 0.02
SEC13-208ENST00000397109 DMDP11532 3685 aa15.16■□□□□ 0.02
SEC13-208ENST00000397109 PAPSS1O43252 624 aaPredicted RBP15.16■□□□□ 0.02
SEC13-208ENST00000397109 MSI1O43347 362 aaKnown RBP15.16■□□□□ 0.02
SEC13-208ENST00000397109 ALDH1A2O94788 518 aa15.16■□□□□ 0.02
SEC13-208ENST00000397109 KLF8O95600 359 aaPredicted RBP15.16■□□□□ 0.02
SEC13-208ENST00000397109 IGLV3-27P01718 113 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms