RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 TUBP50607 506 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 AP3M2P53677 418 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 MCCD1P59942 119 aaPredicted RBP10.87□□□□□ -0.67
NEDD8-202ENST00000396828 PPP3CAQ08209 521 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 TRIM14Q14142 442 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 SGSM1Q2NKQ1 1148 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 UAP1L1Q3KQV9 507 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 EOGTQ5NDL2 527 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 C10orf76Q5T2E6 689 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 EGFLAMQ63HQ2 1017 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 KIAA1211LQ6NV74 962 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 CLEC20AQ6ZU45 233 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 TMC6Q7Z403 805 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 DDX42Q86XP3 938 aaKnown RBP eCLIP10.87□□□□□ -0.67
NEDD8-202ENST00000396828 PGBD3Q8N328 593 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 ZNF513Q8N8E2 541 aaPredicted RBP10.87□□□□□ -0.67
NEDD8-202ENST00000396828 TERB1Q8NA31 727 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 SPC24Q8NBT2 197 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 CCDC26Q8TAB7 109 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 TAS1R2Q8TE23 839 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 WHAMMQ8TF30 809 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 IQCDQ96DY2 449 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 PDLIM2Q96JY6 352 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 ERGIC2Q96RQ1 377 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 NUP58Q9BVL2 599 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 SLC6A17Q9H1V8 727 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 MMRN2Q9H8L6 949 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 POLMQ9NP87 494 aaPredicted RBP10.87□□□□□ -0.67
NEDD8-202ENST00000396828 TMEM9BQ9NQ34 198 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 BCCIPQ9P287 314 aaKnown RBP eCLIP10.87□□□□□ -0.67
NEDD8-202ENST00000396828 DEC1Q9P2X7 70 aa10.87□□□□□ -0.67
NEDD8-202ENST00000396828 CACNA1EQ15878 2313 aa10.86□□□□□ -0.67
NEDD8-202ENST00000396828 A0A1W2PQH9 124 aa10.86□□□□□ -0.67
NEDD8-202ENST00000396828 GTPBP10A4D1E9 387 aaKnown RBP10.86□□□□□ -0.67
NEDD8-202ENST00000396828 WASH3PC4AMC7 463 aa10.86□□□□□ -0.67
NEDD8-202ENST00000396828 ALDH1A2O94788 518 aa10.86□□□□□ -0.67
NEDD8-202ENST00000396828 PBX1P40424 430 aa10.86□□□□□ -0.67
NEDD8-202ENST00000396828 MAPK8P45983 427 aa10.86□□□□□ -0.67
NEDD8-202ENST00000396828 GCLMP48507 274 aa10.86□□□□□ -0.67
NEDD8-202ENST00000396828 ZNF252P-AS1Q0IIN9 211 aa10.86□□□□□ -0.67
NEDD8-202ENST00000396828 FOXC1Q12948 553 aa10.86□□□□□ -0.67
NEDD8-202ENST00000396828 SYCP1Q15431 976 aa10.86□□□□□ -0.67
NEDD8-202ENST00000396828 TRIM61Q5EBN2 209 aa10.86□□□□□ -0.67
NEDD8-202ENST00000396828 KRT39Q6A163 491 aa10.86□□□□□ -0.67
NEDD8-202ENST00000396828 GBP6Q6ZN66 633 aa10.86□□□□□ -0.67
NEDD8-202ENST00000396828 TPGS1Q6ZTW0 290 aa10.86□□□□□ -0.67
NEDD8-202ENST00000396828 HTR3DQ70Z44 454 aa10.86□□□□□ -0.67
NEDD8-202ENST00000396828 LPCAT2Q7L5N7 544 aa10.86□□□□□ -0.67
NEDD8-202ENST00000396828 C11orf74Q86VG3 221 aa10.86□□□□□ -0.67
NEDD8-202ENST00000396828 DEFB124Q8NES8 71 aa10.86□□□□□ -0.67
NEDD8-202ENST00000396828 BHMTQ93088 406 aa10.86□□□□□ -0.67
NEDD8-202ENST00000396828 OTUB2Q96DC9 234 aa10.86□□□□□ -0.67
NEDD8-202ENST00000396828 TMEM8AQ9HCN3 771 aa10.86□□□□□ -0.67
NEDD8-202ENST00000396828 CYLDQ9NQC7 956 aa10.86□□□□□ -0.67
NEDD8-202ENST00000396828 COMMD8Q9NX08 183 aa10.86□□□□□ -0.67
NEDD8-202ENST00000396828 PILRBQ9UKJ0 227 aa10.86□□□□□ -0.67
NEDD8-202ENST00000396828 RAD54BQ9Y620 910 aa10.86□□□□□ -0.67
NEDD8-202ENST00000396828 ATP8B3O60423 1300 aa10.85□□□□□ -0.67
NEDD8-202ENST00000396828 ZFYVE26Q68DK2 2539 aa10.85□□□□□ -0.67
NEDD8-202ENST00000396828 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.85□□□□□ -0.67
NEDD8-202ENST00000396828 NEDD8-MDP1E9PL57 170 aa10.85□□□□□ -0.67
NEDD8-202ENST00000396828 MAP3K13O43283 966 aa10.85□□□□□ -0.67
NEDD8-202ENST00000396828 KLKB1P03952 638 aa10.85□□□□□ -0.67
NEDD8-202ENST00000396828 CISD3P0C7P0 127 aa10.85□□□□□ -0.67
NEDD8-202ENST00000396828 HOXB2P14652 356 aa10.85□□□□□ -0.67
NEDD8-202ENST00000396828 TYRP14679 529 aa10.85□□□□□ -0.67
NEDD8-202ENST00000396828 ENGP17813 658 aa10.85□□□□□ -0.67
NEDD8-202ENST00000396828 CD58P19256 250 aa10.85□□□□□ -0.67
NEDD8-202ENST00000396828 TRIM21P19474 475 aaKnown RBP10.85□□□□□ -0.67
NEDD8-202ENST00000396828 ACO1P21399 889 aaKnown RBP10.85□□□□□ -0.67
NEDD8-202ENST00000396828 PIK3CAP42336 1068 aa10.85□□□□□ -0.67
NEDD8-202ENST00000396828 MXI1P50539 228 aa10.85□□□□□ -0.67
NEDD8-202ENST00000396828 GSDMDP57764 484 aa10.85□□□□□ -0.67
NEDD8-202ENST00000396828 INCA1Q0VD86 236 aa10.85□□□□□ -0.67
NEDD8-202ENST00000396828 EXOC3L4Q17RC7 722 aa10.85□□□□□ -0.67
NEDD8-202ENST00000396828 HSF5Q4G112 596 aaPredicted RBP10.85□□□□□ -0.67
NEDD8-202ENST00000396828 DAB2IPQ5VWQ8 1189 aa10.85□□□□□ -0.67
NEDD8-202ENST00000396828 BTBD8Q5XKL5 378 aa10.85□□□□□ -0.67
NEDD8-202ENST00000396828 SCD5Q86SK9 330 aa10.85□□□□□ -0.67
NEDD8-202ENST00000396828 UNC93AQ86WB7 457 aa10.85□□□□□ -0.67
NEDD8-202ENST00000396828 SYT12Q8IV01 421 aa10.85□□□□□ -0.67
NEDD8-202ENST00000396828 SLC41A1Q8IVJ1 513 aa10.85□□□□□ -0.67
NEDD8-202ENST00000396828 NEK11Q8NG66 645 aa10.85□□□□□ -0.67
NEDD8-202ENST00000396828 OR2I1PQ8NGU4 316 aa10.85□□□□□ -0.67
NEDD8-202ENST00000396828 CYFIP2Q96F07 1278 aa10.85□□□□□ -0.67
NEDD8-202ENST00000396828 HNRNPABQ99729 332 aaKnown RBP10.85□□□□□ -0.67
NEDD8-202ENST00000396828 BBS2Q9BXC9 721 aa10.85□□□□□ -0.67
NEDD8-202ENST00000396828 NACA2Q9H009 215 aa10.85□□□□□ -0.67
NEDD8-202ENST00000396828 TLR8Q9NR97 1041 aaKnown RBP10.85□□□□□ -0.67
NEDD8-202ENST00000396828 DNAJC17Q9NVM6 304 aaKnown RBP10.85□□□□□ -0.67
NEDD8-202ENST00000396828 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.85□□□□□ -0.67
NEDD8-202ENST00000396828 PLK2Q9NYY3 685 aa10.85□□□□□ -0.67
NEDD8-202ENST00000396828 CALCOCO1Q9P1Z2 691 aa10.85□□□□□ -0.67
NEDD8-202ENST00000396828 EVLQ9UI08 416 aaPredicted RBP10.85□□□□□ -0.67
NEDD8-202ENST00000396828 SCML2Q9UQR0 700 aa10.85□□□□□ -0.67
NEDD8-202ENST00000396828 STARD13Q9Y3M8 1113 aa10.85□□□□□ -0.67
NEDD8-202ENST00000396828 PCDH15Q96QU1 1955 aa10.85□□□□□ -0.67
NEDD8-202ENST00000396828 LOC400499M0QZD8 3231 aa10.84□□□□□ -0.67
NEDD8-202ENST00000396828 PCNX2A6NKB5 2137 aa10.84□□□□□ -0.67
NEDD8-202ENST00000396828 IGHV1OR15-9A0A0B4J2B8 117 aa10.84□□□□□ -0.67
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