RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 PDE4CQ08493 712 aa17.09■□□□□ 0.33
CLTA-203ENST00000396603 KIAA1211LQ6NV74 962 aa17.09■□□□□ 0.33
CLTA-203ENST00000396603 SLC41A1Q8IVJ1 513 aa17.09■□□□□ 0.33
CLTA-203ENST00000396603 MINDY1Q8N5J2 469 aa17.09■□□□□ 0.33
CLTA-203ENST00000396603 TRIML1Q8N9V2 468 aa17.09■□□□□ 0.33
CLTA-203ENST00000396603 ANKRD52Q8NB46 1076 aa17.09■□□□□ 0.33
CLTA-203ENST00000396603 GATA6Q92908 595 aa17.09■□□□□ 0.33
CLTA-203ENST00000396603 JAKMIP2Q96AA8 810 aa17.09■□□□□ 0.33
CLTA-203ENST00000396603 PLD4Q96BZ4 506 aa17.09■□□□□ 0.33
CLTA-203ENST00000396603 HEXIM2Q96MH2 286 aaKnown RBP17.09■□□□□ 0.33
CLTA-203ENST00000396603 HSPA12BQ96MM6 686 aa17.09■□□□□ 0.33
CLTA-203ENST00000396603 SCNM1Q9BWG6 230 aa17.09■□□□□ 0.33
CLTA-203ENST00000396603 CISHQ9NSE2 258 aa17.09■□□□□ 0.33
CLTA-203ENST00000396603 OLA1Q9NTK5 396 aaKnown RBP17.09■□□□□ 0.33
CLTA-203ENST00000396603 RAB20Q9NX57 234 aa17.09■□□□□ 0.33
CLTA-203ENST00000396603 CACNA2D2Q9NY47 1150 aa17.09■□□□□ 0.33
CLTA-203ENST00000396603 USP36Q9P275 1121 aaKnown RBP17.09■□□□□ 0.33
CLTA-203ENST00000396603 CYP8B1Q9UNU6 501 aa17.09■□□□□ 0.33
CLTA-203ENST00000396603 STON1Q9Y6Q2 735 aa17.09■□□□□ 0.33
CLTA-203ENST00000396603 PCDH15Q96QU1 1955 aa17.08■□□□□ 0.33
CLTA-203ENST00000396603 MDM4O15151 490 aa17.08■□□□□ 0.32
CLTA-203ENST00000396603 IGLV3-19P01714 112 aa17.08■□□□□ 0.32
CLTA-203ENST00000396603 KLKB1P03952 638 aa17.08■□□□□ 0.32
CLTA-203ENST00000396603 OXTRP30559 389 aa17.08■□□□□ 0.32
CLTA-203ENST00000396603 ZNF423Q2M1K9 1284 aa17.08■□□□□ 0.32
CLTA-203ENST00000396603 COBLL1Q53SF7 1204 aa17.08■□□□□ 0.32
CLTA-203ENST00000396603 PM20D1Q6GTS8 502 aa17.08■□□□□ 0.32
CLTA-203ENST00000396603 ANKS1BQ7Z6G8 1248 aa17.08■□□□□ 0.32
CLTA-203ENST00000396603 SLC4A11Q8NBS3 891 aa17.08■□□□□ 0.32
CLTA-203ENST00000396603 DNASE2BQ8WZ79 361 aa17.08■□□□□ 0.32
CLTA-203ENST00000396603 IRX2Q9BZI1 471 aaPredicted RBP17.08■□□□□ 0.32
CLTA-203ENST00000396603 PCED1AQ9H1Q7 454 aa17.08■□□□□ 0.32
CLTA-203ENST00000396603 ITM2CQ9NQX7 267 aa17.08■□□□□ 0.32
CLTA-203ENST00000396603 MSRB2Q9Y3D2 182 aa17.08■□□□□ 0.32
CLTA-203ENST00000396603 CHD6Q8TD26 2715 aa17.08■□□□□ 0.32
CLTA-203ENST00000396603 CETN3O15182 167 aa17.07■□□□□ 0.32
CLTA-203ENST00000396603 GJB3O75712 270 aa17.07■□□□□ 0.32
CLTA-203ENST00000396603 LATS1O95835 1130 aa17.07■□□□□ 0.32
CLTA-203ENST00000396603 EPB41P11171 864 aaKnown RBP17.07■□□□□ 0.32
CLTA-203ENST00000396603 CORO1AP31146 461 aaKnown RBP17.07■□□□□ 0.32
CLTA-203ENST00000396603 RAD23BP54727 409 aa17.07■□□□□ 0.32
CLTA-203ENST00000396603 YWHAEP62258 255 aaKnown RBP17.07■□□□□ 0.32
CLTA-203ENST00000396603 STIM1Q13586 685 aa17.07■□□□□ 0.32
CLTA-203ENST00000396603 FUT11Q495W5 492 aa17.07■□□□□ 0.32
CLTA-203ENST00000396603 PIGZQ86VD9 579 aa17.07■□□□□ 0.32
CLTA-203ENST00000396603 SCML4Q8N228 414 aa17.07■□□□□ 0.32
CLTA-203ENST00000396603 SPATA20Q8TB22 786 aa17.07■□□□□ 0.32
CLTA-203ENST00000396603 PIWIL1Q96J94 861 aaKnown RBP17.07■□□□□ 0.32
CLTA-203ENST00000396603 GTPBP2Q9BX10 602 aaKnown RBP17.07■□□□□ 0.32
CLTA-203ENST00000396603 PRDM16Q9HAZ2 1276 aa17.07■□□□□ 0.32
CLTA-203ENST00000396603 LMBRD1Q9NUN5 540 aa17.07■□□□□ 0.32
CLTA-203ENST00000396603 WSB2Q9NYS7 404 aaPredicted RBP17.07■□□□□ 0.32
CLTA-203ENST00000396603 MARCH2Q9P0N8 246 aa17.07■□□□□ 0.32
CLTA-203ENST00000396603 RASAL2Q9UJF2 1139 aa17.07■□□□□ 0.32
CLTA-203ENST00000396603 NUDT5Q9UKK9 219 aa17.07■□□□□ 0.32
CLTA-203ENST00000396603 AGO1Q9UL18 857 aaKnown RBP17.07■□□□□ 0.32
CLTA-203ENST00000396603 ZMIZ1Q9ULJ6 1067 aa17.07■□□□□ 0.32
CLTA-203ENST00000396603 COQ4Q9Y3A0 265 aa17.07■□□□□ 0.32
CLTA-203ENST00000396603 MYO18AQ92614 2054 aaKnown RBP17.06■□□□□ 0.32
CLTA-203ENST00000396603 XPO1O14980 1071 aaKnown RBP17.06■□□□□ 0.32
CLTA-203ENST00000396603 SLC16A3O15427 465 aaKnown RBP17.06■□□□□ 0.32
CLTA-203ENST00000396603 SYNCRIPO60506 623 aaKnown RBP17.06■□□□□ 0.32
CLTA-203ENST00000396603 MBD3O95983 291 aa17.06■□□□□ 0.32
CLTA-203ENST00000396603 ZBED1O96006 694 aa17.06■□□□□ 0.32
CLTA-203ENST00000396603 BCAT1P54687 386 aa17.06■□□□□ 0.32
CLTA-203ENST00000396603 YWHAGP61981 247 aaKnown RBP eCLIP17.06■□□□□ 0.32
CLTA-203ENST00000396603 SIM1P81133 766 aaPredicted RBP17.06■□□□□ 0.32
CLTA-203ENST00000396603 EFEMP1Q12805 493 aa17.06■□□□□ 0.32
CLTA-203ENST00000396603 TRIP4Q15650 581 aaPredicted RBP17.06■□□□□ 0.32
CLTA-203ENST00000396603 ZNF394Q53GI3 561 aa17.06■□□□□ 0.32
CLTA-203ENST00000396603 ZNF658Q5TYW1 1059 aaPredicted RBP17.06■□□□□ 0.32
CLTA-203ENST00000396603 RSRC2Q7L4I2 434 aaKnown RBP17.06■□□□□ 0.32
CLTA-203ENST00000396603 RGL4Q8IZJ4 473 aa17.06■□□□□ 0.32
CLTA-203ENST00000396603 RBBP8NLQ8NC74 664 aaPredicted RBP17.06■□□□□ 0.32
CLTA-203ENST00000396603 ELOVL2Q9NXB9 296 aa17.06■□□□□ 0.32
CLTA-203ENST00000396603 PLK2Q9NYY3 685 aa17.06■□□□□ 0.32
CLTA-203ENST00000396603 STOML2Q9UJZ1 356 aa17.06■□□□□ 0.32
CLTA-203ENST00000396603 KIAA1257Q9ULG3 409 aa17.06■□□□□ 0.32
CLTA-203ENST00000396603 MAPK8IP1Q9UQF2 711 aa17.06■□□□□ 0.32
CLTA-203ENST00000396603 HBS1LQ9Y450 684 aaKnown RBP17.06■□□□□ 0.32
CLTA-203ENST00000396603 RAD54BQ9Y620 910 aa17.06■□□□□ 0.32
CLTA-203ENST00000396603 MYH10P35580 1976 aa17.06■□□□□ 0.32
CLTA-203ENST00000396603 A0A1B0GTW7 788 aa17.05■□□□□ 0.32
CLTA-203ENST00000396603 ZNF883P0CG24 379 aa17.05■□□□□ 0.32
CLTA-203ENST00000396603 CD59P13987 128 aa17.05■□□□□ 0.32
CLTA-203ENST00000396603 PTMSP20962 102 aa17.05■□□□□ 0.32
CLTA-203ENST00000396603 IL12RB1P42701 662 aa17.05■□□□□ 0.32
CLTA-203ENST00000396603 GEN1Q17RS7 908 aa17.05■□□□□ 0.32
CLTA-203ENST00000396603 PLEKHG6Q3KR16 790 aa17.05■□□□□ 0.32
CLTA-203ENST00000396603 MPPE1Q53F39 396 aa17.05■□□□□ 0.32
CLTA-203ENST00000396603 KIAA1324Q6UXG2 1013 aaKnown RBP17.05■□□□□ 0.32
CLTA-203ENST00000396603 ZC3H3Q8IXZ2 948 aaKnown RBP17.05■□□□□ 0.32
CLTA-203ENST00000396603 ZNF557Q8N988 423 aaPredicted RBP17.05■□□□□ 0.32
CLTA-203ENST00000396603 SEMA4DQ92854 862 aa17.05■□□□□ 0.32
CLTA-203ENST00000396603 MKRN2Q9H000 416 aaKnown RBP17.05■□□□□ 0.32
CLTA-203ENST00000396603 MMRN2Q9H8L6 949 aa17.05■□□□□ 0.32
CLTA-203ENST00000396603 FBRSQ9HAH7 460 aa17.05■□□□□ 0.32
CLTA-203ENST00000396603 ASCC3Q8N3C0 2202 aaKnown RBP17.04■□□□□ 0.32
CLTA-203ENST00000396603 WASH3PC4AMC7 463 aa17.04■□□□□ 0.32
CLTA-203ENST00000396603 HARS2P49590 506 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms