RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 ATL2Q8NHH9 583 aa13.2□□□□□ -0.3
TRIM39-204ENST00000396548 GIPC2Q8TF65 315 aa13.2□□□□□ -0.3
TRIM39-204ENST00000396548 DHX35Q9H5Z1 703 aaKnown RBP13.2□□□□□ -0.3
TRIM39-204ENST00000396548 ESYT3A0FGR9 886 aa13.2□□□□□ -0.3
TRIM39-204ENST00000396548 ITGAVP06756 1048 aa13.2□□□□□ -0.3
TRIM39-204ENST00000396548 CNPP09543 421 aaKnown RBP13.2□□□□□ -0.3
TRIM39-204ENST00000396548 KLRC2P26717 231 aa13.2□□□□□ -0.3
TRIM39-204ENST00000396548 VCPP55072 806 aaKnown RBP13.2□□□□□ -0.3
TRIM39-204ENST00000396548 IFRD2Q12894 506 aaPredicted RBP13.2□□□□□ -0.3
TRIM39-204ENST00000396548 PTK6Q13882 451 aa13.2□□□□□ -0.3
TRIM39-204ENST00000396548 KRT81Q14533 505 aa13.2□□□□□ -0.3
TRIM39-204ENST00000396548 SPRED2Q7Z698 418 aa13.2□□□□□ -0.3
TRIM39-204ENST00000396548 RFX6Q8HWS3 928 aa13.2□□□□□ -0.3
TRIM39-204ENST00000396548 OVCA2Q8WZ82 227 aa13.2□□□□□ -0.3
TRIM39-204ENST00000396548 TRMT2BQ96GJ1 504 aaKnown RBP13.2□□□□□ -0.3
TRIM39-204ENST00000396548 FAM204AQ9H8W3 233 aa13.2□□□□□ -0.3
TRIM39-204ENST00000396548 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.2□□□□□ -0.3
TRIM39-204ENST00000396548 GRHL1Q9NZI5 618 aa13.2□□□□□ -0.3
TRIM39-204ENST00000396548 HCAR3P49019 387 aa13.2□□□□□ -0.3
TRIM39-204ENST00000396548 PSEN1P49768 467 aa13.2□□□□□ -0.3
TRIM39-204ENST00000396548 ERVFC1P60507 584 aa13.2□□□□□ -0.3
TRIM39-204ENST00000396548 OTUD4Q01804 1114 aaKnown RBP13.2□□□□□ -0.3
TRIM39-204ENST00000396548 BYSLQ13895 437 aaKnown RBP13.2□□□□□ -0.3
TRIM39-204ENST00000396548 ZFYVE27Q5T4F4 411 aa13.2□□□□□ -0.3
TRIM39-204ENST00000396548 ACTL9Q8TC94 416 aa13.2□□□□□ -0.3
TRIM39-204ENST00000396548 FBXO32Q969P5 355 aa13.2□□□□□ -0.3
TRIM39-204ENST00000396548 UBE2OQ9C0C9 1292 aaKnown RBP13.2□□□□□ -0.3
TRIM39-204ENST00000396548 NEUROG2Q9H2A3 272 aa13.2□□□□□ -0.3
TRIM39-204ENST00000396548 SFMBT1Q9UHJ3 866 aa13.2□□□□□ -0.3
TRIM39-204ENST00000396548 SSX2IPQ9Y2D8 614 aa13.2□□□□□ -0.3
TRIM39-204ENST00000396548 YIPF1Q9Y548 306 aa13.2□□□□□ -0.3
TRIM39-204ENST00000396548 TRANK1O15050 2925 aa13.19□□□□□ -0.3
TRIM39-204ENST00000396548 IGLV3-27P01718 113 aa13.19□□□□□ -0.3
TRIM39-204ENST00000396548 GOT1P17174 413 aa13.19□□□□□ -0.3
TRIM39-204ENST00000396548 TGM2P21980 687 aa13.19□□□□□ -0.3
TRIM39-204ENST00000396548 NOMO1Q15155 1222 aa13.19□□□□□ -0.3
TRIM39-204ENST00000396548 NPNTQ6UXI9 565 aa13.19□□□□□ -0.3
TRIM39-204ENST00000396548 SYDE1Q6ZW31 735 aaPredicted RBP13.19□□□□□ -0.3
TRIM39-204ENST00000396548 ALLCQ8N6M5 410 aa13.19□□□□□ -0.3
TRIM39-204ENST00000396548 TTC13Q8NBP0 860 aa13.19□□□□□ -0.3
TRIM39-204ENST00000396548 SPPL3Q8TCT6 385 aa13.19□□□□□ -0.3
TRIM39-204ENST00000396548 PRDM16Q9HAZ2 1276 aa13.19□□□□□ -0.3
TRIM39-204ENST00000396548 ZDHHC18Q9NUE0 388 aa13.19□□□□□ -0.3
TRIM39-204ENST00000396548 TMEM51Q9NW97 253 aa13.19□□□□□ -0.3
TRIM39-204ENST00000396548 SYNJ2BP-COX16A0A087WUM0 186 aa13.19□□□□□ -0.3
TRIM39-204ENST00000396548 MYOGP15173 224 aa13.19□□□□□ -0.3
TRIM39-204ENST00000396548 DNAJB2P25686 324 aa13.19□□□□□ -0.3
TRIM39-204ENST00000396548 SLC10A2Q12908 348 aaPredicted RBP13.19□□□□□ -0.3
TRIM39-204ENST00000396548 NNTQ13423 1086 aa13.19□□□□□ -0.3
TRIM39-204ENST00000396548 CAMK1Q14012 370 aa13.19□□□□□ -0.3
TRIM39-204ENST00000396548 PPP2R5DQ14738 602 aa13.19□□□□□ -0.3
TRIM39-204ENST00000396548 ODF2Q5BJF6 829 aa13.19□□□□□ -0.3
TRIM39-204ENST00000396548 BRMS1LQ5PSV4 323 aa13.19□□□□□ -0.3
TRIM39-204ENST00000396548 NCBP2-AS2Q69YL0 99 aa13.19□□□□□ -0.3
TRIM39-204ENST00000396548 FAM109BQ6ICB4 259 aaPredicted RBP13.19□□□□□ -0.3
TRIM39-204ENST00000396548 DDX42Q86XP3 938 aaKnown RBP eCLIP13.19□□□□□ -0.3
TRIM39-204ENST00000396548 GSPT2Q8IYD1 628 aaKnown RBP13.19□□□□□ -0.3
TRIM39-204ENST00000396548 CCDC105Q8IYK2 499 aa13.19□□□□□ -0.3
TRIM39-204ENST00000396548 ABHD8Q96I13 439 aa13.19□□□□□ -0.3
TRIM39-204ENST00000396548 FCRL2Q96LA5 508 aaPredicted RBP13.19□□□□□ -0.3
TRIM39-204ENST00000396548 TKTL2Q9H0I9 626 aa13.19□□□□□ -0.3
TRIM39-204ENST00000396548 OSBPL2Q9H1P3 480 aa13.19□□□□□ -0.3
TRIM39-204ENST00000396548 WDCPQ9H6R7 721 aa13.19□□□□□ -0.3
TRIM39-204ENST00000396548 TLR8Q9NR97 1041 aaKnown RBP13.19□□□□□ -0.3
TRIM39-204ENST00000396548 COX16Q9P0S2 106 aa13.19□□□□□ -0.3
TRIM39-204ENST00000396548 TLR6Q9Y2C9 796 aa13.19□□□□□ -0.3
TRIM39-204ENST00000396548 RARGP13631 454 aa13.18□□□□□ -0.3
TRIM39-204ENST00000396548 GBP1P32455 592 aa13.18□□□□□ -0.3
TRIM39-204ENST00000396548 DYNLT1P63172 113 aa13.18□□□□□ -0.3
TRIM39-204ENST00000396548 CUL1Q13616 776 aa13.18□□□□□ -0.3
TRIM39-204ENST00000396548 TFDP2Q14188 446 aa13.18□□□□□ -0.3
TRIM39-204ENST00000396548 MANEALQ5VSG8 457 aa13.18□□□□□ -0.3
TRIM39-204ENST00000396548 ZDHHC24Q6UX98 284 aa13.18□□□□□ -0.3
TRIM39-204ENST00000396548 RNF139Q8WU17 664 aa13.18□□□□□ -0.3
TRIM39-204ENST00000396548 KLHL5Q96PQ7 755 aa13.18□□□□□ -0.3
TRIM39-204ENST00000396548 HAPLN3Q96S86 360 aa13.18□□□□□ -0.3
TRIM39-204ENST00000396548 C17orf80Q9BSJ5 609 aa13.18□□□□□ -0.3
TRIM39-204ENST00000396548 ARHGEF4Q9NR80 690 aa13.18□□□□□ -0.3
TRIM39-204ENST00000396548 ETNK2Q9NVF9 386 aa13.18□□□□□ -0.3
TRIM39-204ENST00000396548 DCLK1O15075 740 aa13.18□□□□□ -0.3
TRIM39-204ENST00000396548 DAPK3O43293 454 aa13.18□□□□□ -0.3
TRIM39-204ENST00000396548 MSI1O43347 362 aaKnown RBP13.18□□□□□ -0.3
TRIM39-204ENST00000396548 TGM5O43548 720 aa13.18□□□□□ -0.3
TRIM39-204ENST00000396548 SEC31AO94979 1220 aaKnown RBP13.18□□□□□ -0.3
TRIM39-204ENST00000396548 ECEL1O95672 775 aa13.18□□□□□ -0.3
TRIM39-204ENST00000396548 RPL21P46778 160 aaKnown RBP13.18□□□□□ -0.3
TRIM39-204ENST00000396548 PPP6R3Q5H9R7 873 aaPredicted RBP13.18□□□□□ -0.3
TRIM39-204ENST00000396548 TMEM150AQ86TG1 271 aa13.18□□□□□ -0.3
TRIM39-204ENST00000396548 HAUS1Q96CS2 278 aa13.18□□□□□ -0.3
TRIM39-204ENST00000396548 LBHD1Q9BQE6 289 aaPredicted RBP13.18□□□□□ -0.3
TRIM39-204ENST00000396548 RAB17Q9H0T7 212 aa13.18□□□□□ -0.3
TRIM39-204ENST00000396548 CYP4F11Q9HBI6 524 aa13.18□□□□□ -0.3
TRIM39-204ENST00000396548 ARGLU1Q9NWB6 273 aaPredicted RBP13.18□□□□□ -0.3
TRIM39-204ENST00000396548 NUDT5Q9UKK9 219 aa13.18□□□□□ -0.3
TRIM39-204ENST00000396548 UTP11Q9Y3A2 253 aaKnown RBP13.18□□□□□ -0.3
TRIM39-204ENST00000396548 RWDD3Q9Y3V2 267 aa13.18□□□□□ -0.3
TRIM39-204ENST00000396548 MFHAS1Q9Y4C4 1052 aa13.18□□□□□ -0.3
TRIM39-204ENST00000396548 C2orf71A6NGG8 1288 aa13.18□□□□□ -0.3
TRIM39-204ENST00000396548 APOL1O14791 398 aa13.18□□□□□ -0.3
TRIM39-204ENST00000396548 MAGEA10P43363 369 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms