RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 PYGMP11217 842 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 PSMA3P25788 255 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 CYP2C18P33260 490 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 LHX1P48742 406 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 ZNF157P51786 506 aaPredicted RBP5.57□□□□□ -1.52
VPS41-203ENST00000395969 CACNA2D1P54289 1103 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 SESN3P58005 492 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 DR1Q01658 176 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 RNASELQ05823 741 aaKnown RBP5.57□□□□□ -1.52
VPS41-203ENST00000395969 LSAMPQ13449 338 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 GSTA3Q16772 222 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 SOWAHAQ2M3V2 549 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 PTPN20Q4JDL3 420 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 FBXO47Q5MNV8 452 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 SEL1L2Q5TEA6 688 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 LHX8Q68G74 356 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 BHLHA9Q7RTU4 235 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 LRRC71Q8N4P6 559 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 ALLCQ8N6M5 410 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 FBXO25Q8TCJ0 367 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 C2orf15Q8WU43 125 aaKnown RBP5.57□□□□□ -1.52
VPS41-203ENST00000395969 MAGEB18Q96M61 343 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 ZMAT2Q96NC0 199 aaKnown RBP5.57□□□□□ -1.52
VPS41-203ENST00000395969 TMEM175Q9BSA9 504 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 ARHGAP39Q9C0H5 1083 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 SEMA4AQ9H3S1 761 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 DENND2DQ9H6A0 471 aaPredicted RBP5.57□□□□□ -1.52
VPS41-203ENST00000395969 HMX1Q9NP08 348 aaPredicted RBP5.57□□□□□ -1.52
VPS41-203ENST00000395969 DDX43Q9NXZ2 648 aaKnown RBP5.57□□□□□ -1.52
VPS41-203ENST00000395969 SHOC2Q9UQ13 582 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 NR2E1Q9Y466 385 aa5.57□□□□□ -1.52
VPS41-203ENST00000395969 TMEM120BA0PK00 339 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 WASH4PA8MWX3 477 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 HACD1B0YJ81 288 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 PEX10O60683 326 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 GABBR2O75899 941 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 CHRNA1P02708 482 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 ZNF286BP0CG31 522 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 CYP2C9P11712 490 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 RFC2P35250 354 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 MAGEA11P43364 429 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 ERFP50548 548 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 BCAT1P54687 386 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 BST2Q10589 180 aaKnown RBP5.56□□□□□ -1.52
VPS41-203ENST00000395969 TRPC3Q13507 836 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 LRRC14Q15048 493 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 ARHGEF6Q15052 776 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 MUM1Q2TAK8 710 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 CNPY1Q3B7I2 92 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 C5orf22Q49AR2 442 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 BOLA3Q53S33 107 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 SGO2Q562F6 1265 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 TFDP3Q5H9I0 405 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 SYCP2LQ5T4T6 812 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 SNX30Q5VWJ9 437 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 TTC27Q6P3X3 843 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 ANKRD33Q7Z3H0 272 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 STKLD1Q8NE28 680 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 TTC8Q8TAM2 541 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 NRG4Q8WWG1 115 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 LZICQ8WZA0 190 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 CCDC127Q96BQ5 260 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 OLFM3Q96PB7 478 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 SPATA16Q9BXB7 569 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 TBC1D10AQ9BXI6 508 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 VCX3BQ9H321 246 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 PCDH9Q9HC56 1237 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 PREBQ9HCU5 417 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 VCX3AQ9NNX9 186 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 PAK6Q9NQU5 681 aaPredicted RBP5.56□□□□□ -1.52
VPS41-203ENST00000395969 MKS1Q9NXB0 559 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 GALNT8Q9NY28 637 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 ANKFY1Q9P2R3 1169 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 STOML1Q9UBI4 398 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 CIDEBQ9UHD4 219 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 CDH9Q9ULB4 789 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 IPPQ9Y573 584 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 PCDHGB7Q9Y5F8 929 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 OAZ2O95190 189 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 TRUB2O95900 331 aaKnown RBP5.56□□□□□ -1.52
VPS41-203ENST00000395969 FGGP02679 453 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 DLATP10515 647 aaKnown RBP5.56□□□□□ -1.52
VPS41-203ENST00000395969 CD151P48509 253 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 SLC6A3Q01959 620 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 OGDHQ02218 1023 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 MORF4L2Q15014 288 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 UPP1Q16831 310 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 ARHGAP44Q17R89 818 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 C10orf62Q5T681 223 aaPredicted RBP5.56□□□□□ -1.52
VPS41-203ENST00000395969 AFMIDQ63HM1 303 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 TMEM270Q6UE05 265 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 RGS9BPQ6ZS82 235 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 RTL10Q7L3V2 364 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 DEPDC4Q8N2C3 294 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 ZCCHC9Q8N567 271 aaKnown RBP5.56□□□□□ -1.52
VPS41-203ENST00000395969 MCUQ8NE86 351 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 TMEM40Q8WWA1 233 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 KRT35Q92764 455 aa5.56□□□□□ -1.52
VPS41-203ENST00000395969 ABTB1Q969K4 478 aaPredicted RBP5.56□□□□□ -1.52
VPS41-203ENST00000395969 TOX2Q96NM4 488 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms