RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 MYEOVQ96EZ4 313 aa5.61□□□□□ -1.51
HMGB1P10-201ENST00000395823 RBM17Q96I25 401 aaKnown RBP5.61□□□□□ -1.51
HMGB1P10-201ENST00000395823 EIF3CQ99613 913 aaKnown RBP5.61□□□□□ -1.51
HMGB1P10-201ENST00000395823 PLEKHA5Q9HAU0 1116 aa5.61□□□□□ -1.51
HMGB1P10-201ENST00000395823 TLR8Q9NR97 1041 aaKnown RBP5.61□□□□□ -1.51
HMGB1P10-201ENST00000395823 TMLHEQ9NVH6 421 aa5.61□□□□□ -1.51
HMGB1P10-201ENST00000395823 CNPY2Q9Y2B0 182 aa5.61□□□□□ -1.51
HMGB1P10-201ENST00000395823 PCDHA10Q9Y5I2 948 aa5.61□□□□□ -1.51
HMGB1P10-201ENST00000395823 SAC3D1A6NKF1 404 aa5.6□□□□□ -1.51
HMGB1P10-201ENST00000395823 USO1O60763 962 aaKnown RBP5.6□□□□□ -1.51
HMGB1P10-201ENST00000395823 PMPCBO75439 489 aa5.6□□□□□ -1.51
HMGB1P10-201ENST00000395823 GFPT2O94808 682 aa5.6□□□□□ -1.51
HMGB1P10-201ENST00000395823 CHN1P15882 459 aa5.6□□□□□ -1.51
HMGB1P10-201ENST00000395823 TGM1P22735 817 aa5.6□□□□□ -1.51
HMGB1P10-201ENST00000395823 CTGFP29279 349 aa5.6□□□□□ -1.51
HMGB1P10-201ENST00000395823 SELENOPP49908 381 aa5.6□□□□□ -1.51
HMGB1P10-201ENST00000395823 TAS2R50P59544 299 aa5.6□□□□□ -1.51
HMGB1P10-201ENST00000395823 E2F1Q01094 437 aa5.6□□□□□ -1.51
HMGB1P10-201ENST00000395823 DNASE1L3Q13609 305 aa5.6□□□□□ -1.51
HMGB1P10-201ENST00000395823 KRT32Q14532 448 aa5.6□□□□□ -1.51
HMGB1P10-201ENST00000395823 BAK1Q16611 211 aa5.6□□□□□ -1.51
HMGB1P10-201ENST00000395823 FAM187BQ17R55 369 aa5.6□□□□□ -1.51
HMGB1P10-201ENST00000395823 PRICKLE4Q2TBC4 344 aa5.6□□□□□ -1.51
HMGB1P10-201ENST00000395823 L1TD1Q5T7N2 865 aaKnown RBP5.6□□□□□ -1.51
HMGB1P10-201ENST00000395823 C4orf50Q6ZRC1 276 aa5.6□□□□□ -1.51
HMGB1P10-201ENST00000395823 H1FNTQ75WM6 255 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P10-201ENST00000395823 RAB11FIP4Q86YS3 637 aa5.6□□□□□ -1.51
HMGB1P10-201ENST00000395823 PTGR2Q8N8N7 351 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P10-201ENST00000395823 FSIP1Q8NA03 581 aa5.6□□□□□ -1.51
HMGB1P10-201ENST00000395823 LSM14AQ8ND56 463 aaKnown RBP5.6□□□□□ -1.51
HMGB1P10-201ENST00000395823 TOR1AIP2Q8NFQ8 470 aa5.6□□□□□ -1.51
HMGB1P10-201ENST00000395823 ASB10Q8WXI3 467 aa5.6□□□□□ -1.51
HMGB1P10-201ENST00000395823 RFKQ969G6 155 aa5.6□□□□□ -1.51
HMGB1P10-201ENST00000395823 PTCD3Q96EY7 689 aaKnown RBP5.6□□□□□ -1.51
HMGB1P10-201ENST00000395823 ZCCHC4Q9H5U6 513 aa5.6□□□□□ -1.51
HMGB1P10-201ENST00000395823 PARD6AQ9NPB6 346 aa5.6□□□□□ -1.51
HMGB1P10-201ENST00000395823 ST6GALNAC2Q9UJ37 374 aa5.6□□□□□ -1.51
HMGB1P10-201ENST00000395823 PCDHB2Q9Y5E7 798 aa5.6□□□□□ -1.51
HMGB1P10-201ENST00000395823 DBX1A6NMT0 343 aa5.59□□□□□ -1.51
HMGB1P10-201ENST00000395823 SPTLC2O15270 562 aa5.59□□□□□ -1.51
HMGB1P10-201ENST00000395823 TIMM44O43615 452 aa5.59□□□□□ -1.51
HMGB1P10-201ENST00000395823 MBPP02686 304 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P10-201ENST00000395823 CYP3A4P08684 503 aa5.59□□□□□ -1.51
HMGB1P10-201ENST00000395823 CREB1P16220 341 aa5.59□□□□□ -1.51
HMGB1P10-201ENST00000395823 ADRA1DP25100 572 aa5.59□□□□□ -1.51
HMGB1P10-201ENST00000395823 PSMC2P35998 433 aaKnown RBP5.59□□□□□ -1.51
HMGB1P10-201ENST00000395823 RCAN1P53805 252 aa5.59□□□□□ -1.51
HMGB1P10-201ENST00000395823 NXPH1P58417 271 aa5.59□□□□□ -1.51
HMGB1P10-201ENST00000395823 HS1BP3Q53T59 392 aa5.59□□□□□ -1.51
HMGB1P10-201ENST00000395823 CBWD5Q5RIA9 395 aa5.59□□□□□ -1.51
HMGB1P10-201ENST00000395823 XP32Q5T750 250 aa5.59□□□□□ -1.51
HMGB1P10-201ENST00000395823 ZNF618Q5T7W0 954 aa5.59□□□□□ -1.51
HMGB1P10-201ENST00000395823 ZNF585AQ6P3V2 769 aa5.59□□□□□ -1.51
HMGB1P10-201ENST00000395823 P3H2Q8IVL5 708 aa5.59□□□□□ -1.51
HMGB1P10-201ENST00000395823 XAGE5Q8WWM1 108 aa5.59□□□□□ -1.51
HMGB1P10-201ENST00000395823 FAR2Q96K12 515 aa5.59□□□□□ -1.51
HMGB1P10-201ENST00000395823 PIGSQ96S52 555 aa5.59□□□□□ -1.51
HMGB1P10-201ENST00000395823 DPCDQ9BVM2 203 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P10-201ENST00000395823 USP44Q9H0E7 712 aa5.59□□□□□ -1.51
HMGB1P10-201ENST00000395823 SERHL2Q9H4I8 314 aa5.59□□□□□ -1.51
HMGB1P10-201ENST00000395823 STN1Q9H668 368 aaKnown RBP5.59□□□□□ -1.51
HMGB1P10-201ENST00000395823 CLIC5Q9NZA1 410 aa5.59□□□□□ -1.51
HMGB1P10-201ENST00000395823 ORC3Q9UBD5 711 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P10-201ENST00000395823 BAG5Q9UL15 447 aa5.59□□□□□ -1.51
HMGB1P10-201ENST00000395823 SLC12A4Q9UP95 1085 aa5.59□□□□□ -1.51
HMGB1P10-201ENST00000395823 SH2B3Q9UQQ2 575 aa5.59□□□□□ -1.51
HMGB1P10-201ENST00000395823 LAS1LQ9Y4W2 734 aaKnown RBP5.59□□□□□ -1.51
HMGB1P10-201ENST00000395823 CENPVL1A0A0U1RR11 272 aa5.58□□□□□ -1.52
HMGB1P10-201ENST00000395823 PSMD9O00233 223 aa5.58□□□□□ -1.52
HMGB1P10-201ENST00000395823 PEX12O00623 359 aa5.58□□□□□ -1.52
HMGB1P10-201ENST00000395823 DHX16O60231 1041 aaKnown RBP5.58□□□□□ -1.52
HMGB1P10-201ENST00000395823 PRAMEF2O60811 474 aa5.58□□□□□ -1.52
HMGB1P10-201ENST00000395823 LAG3P18627 525 aa5.58□□□□□ -1.52
HMGB1P10-201ENST00000395823 GGT5P36269 586 aa5.58□□□□□ -1.52
HMGB1P10-201ENST00000395823 PNPLA4P41247 253 aa5.58□□□□□ -1.52
HMGB1P10-201ENST00000395823 CCR9P51686 369 aa5.58□□□□□ -1.52
HMGB1P10-201ENST00000395823 PSG6Q00889 435 aa5.58□□□□□ -1.52
HMGB1P10-201ENST00000395823 TLE3Q04726 772 aa5.58□□□□□ -1.52
HMGB1P10-201ENST00000395823 PRKG2Q13237 762 aa5.58□□□□□ -1.52
HMGB1P10-201ENST00000395823 ERV3-1Q14264 604 aa5.58□□□□□ -1.52
HMGB1P10-201ENST00000395823 SPATA1Q5VX52 437 aa5.58□□□□□ -1.52
HMGB1P10-201ENST00000395823 ACSM6Q6P461 480 aa5.58□□□□□ -1.52
HMGB1P10-201ENST00000395823 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P10-201ENST00000395823 CHD1LQ86WJ1 897 aa5.58□□□□□ -1.52
HMGB1P10-201ENST00000395823 CCDC89Q8N998 374 aa5.58□□□□□ -1.52
HMGB1P10-201ENST00000395823 ADAMTS15Q8TE58 950 aa5.58□□□□□ -1.52
HMGB1P10-201ENST00000395823 ARRDC3Q96B67 414 aa5.58□□□□□ -1.52
HMGB1P10-201ENST00000395823 FUZQ9BT04 418 aa5.58□□□□□ -1.52
HMGB1P10-201ENST00000395823 CDCP1Q9H5V8 836 aa5.58□□□□□ -1.52
HMGB1P10-201ENST00000395823 ZNF703Q9H7S9 590 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P10-201ENST00000395823 KLC4Q9NSK0 619 aa5.58□□□□□ -1.52
HMGB1P10-201ENST00000395823 AURKAIP1Q9NWT8 199 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P10-201ENST00000395823 ZDHHC7Q9NXF8 308 aa5.58□□□□□ -1.52
HMGB1P10-201ENST00000395823 KCTD5Q9NXV2 234 aa5.58□□□□□ -1.52
HMGB1P10-201ENST00000395823 GDAQ9Y2T3 454 aa5.58□□□□□ -1.52
HMGB1P10-201ENST00000395823 TBC1D3DA0A087WVF3 549 aa5.57□□□□□ -1.52
HMGB1P10-201ENST00000395823 TBC1D3IA0A087WXS9 549 aa5.57□□□□□ -1.52
HMGB1P10-201ENST00000395823 TBC1D3EA0A087X179 549 aa5.57□□□□□ -1.52
HMGB1P10-201ENST00000395823 TBC1D3KA0A087X1G2 549 aa5.57□□□□□ -1.52
HMGB1P10-201ENST00000395823 TBC1D3BA6NDS4 549 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms