RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 PIGZQ86VD9 579 aa18.34■□□□□ 0.53
SNRPA1-202ENST00000394082 MINDY1Q8N5J2 469 aa18.34■□□□□ 0.53
SNRPA1-202ENST00000394082 CADM4Q8NFZ8 388 aa18.34■□□□□ 0.53
SNRPA1-202ENST00000394082 DNASE2BQ8WZ79 361 aa18.34■□□□□ 0.53
SNRPA1-202ENST00000394082 SEMA4DQ92854 862 aa18.34■□□□□ 0.53
SNRPA1-202ENST00000394082 P2RY11Q96G91 374 aa18.34■□□□□ 0.53
SNRPA1-202ENST00000394082 PIWIL1Q96J94 861 aaKnown RBP18.34■□□□□ 0.53
SNRPA1-202ENST00000394082 ZDHHC5Q9C0B5 715 aa18.34■□□□□ 0.53
SNRPA1-202ENST00000394082 ITM2CQ9NQX7 267 aa18.34■□□□□ 0.53
SNRPA1-202ENST00000394082 MARCH2Q9P0N8 246 aa18.34■□□□□ 0.53
SNRPA1-202ENST00000394082 AGO1Q9UL18 857 aaKnown RBP18.34■□□□□ 0.53
SNRPA1-202ENST00000394082 ZDHHC9Q9Y397 364 aa18.34■□□□□ 0.53
SNRPA1-202ENST00000394082 COQ4Q9Y3A0 265 aa18.34■□□□□ 0.53
SNRPA1-202ENST00000394082 CACNA1EQ15878 2313 aa18.33■□□□□ 0.53
SNRPA1-202ENST00000394082 FAM221BA6H8Z2 402 aa18.33■□□□□ 0.52
SNRPA1-202ENST00000394082 CETN3O15182 167 aa18.33■□□□□ 0.52
SNRPA1-202ENST00000394082 GJB3O75712 270 aa18.33■□□□□ 0.52
SNRPA1-202ENST00000394082 CYBBP04839 570 aa18.33■□□□□ 0.52
SNRPA1-202ENST00000394082 CORO1AP31146 461 aaKnown RBP18.33■□□□□ 0.52
SNRPA1-202ENST00000394082 RDXP35241 583 aaKnown RBP18.33■□□□□ 0.52
SNRPA1-202ENST00000394082 ZNF445P59923 1031 aa18.33■□□□□ 0.52
SNRPA1-202ENST00000394082 PDE4CQ08493 712 aa18.33■□□□□ 0.52
SNRPA1-202ENST00000394082 FUT11Q495W5 492 aa18.33■□□□□ 0.52
SNRPA1-202ENST00000394082 ZNF394Q53GI3 561 aa18.33■□□□□ 0.52
SNRPA1-202ENST00000394082 COBLL1Q53SF7 1204 aa18.33■□□□□ 0.52
SNRPA1-202ENST00000394082 PLD4Q96BZ4 506 aa18.33■□□□□ 0.52
SNRPA1-202ENST00000394082 GTPBP2Q9BX10 602 aaKnown RBP18.33■□□□□ 0.52
SNRPA1-202ENST00000394082 PRDM16Q9HAZ2 1276 aa18.33■□□□□ 0.52
SNRPA1-202ENST00000394082 OLA1Q9NTK5 396 aaKnown RBP18.33■□□□□ 0.52
SNRPA1-202ENST00000394082 WSB2Q9NYS7 404 aaPredicted RBP18.33■□□□□ 0.52
SNRPA1-202ENST00000394082 PLK2Q9NYY3 685 aa18.33■□□□□ 0.52
SNRPA1-202ENST00000394082 RASAL2Q9UJF2 1139 aa18.33■□□□□ 0.52
SNRPA1-202ENST00000394082 RAD54BQ9Y620 910 aa18.33■□□□□ 0.52
SNRPA1-202ENST00000394082 AKAP13Q12802 2813 aa18.32■□□□□ 0.52
SNRPA1-202ENST00000394082 DMXL2Q8TDJ6 3036 aa18.32■□□□□ 0.52
SNRPA1-202ENST00000394082 WASH3PC4AMC7 463 aa18.32■□□□□ 0.52
SNRPA1-202ENST00000394082 ZNF202O95125 648 aa18.32■□□□□ 0.52
SNRPA1-202ENST00000394082 EPB41P11171 864 aaKnown RBP18.32■□□□□ 0.52
SNRPA1-202ENST00000394082 CD59P13987 128 aa18.32■□□□□ 0.52
SNRPA1-202ENST00000394082 OXTRP30559 389 aa18.32■□□□□ 0.52
SNRPA1-202ENST00000394082 YWHAGP61981 247 aaKnown RBP eCLIP18.32■□□□□ 0.52
SNRPA1-202ENST00000394082 EFEMP1Q12805 493 aa18.32■□□□□ 0.52
SNRPA1-202ENST00000394082 TRIP4Q15650 581 aaPredicted RBP18.32■□□□□ 0.52
SNRPA1-202ENST00000394082 GEN1Q17RS7 908 aa18.32■□□□□ 0.52
SNRPA1-202ENST00000394082 ANKS1BQ7Z6G8 1248 aa18.32■□□□□ 0.52
SNRPA1-202ENST00000394082 DEFB119Q8N690 84 aa18.32■□□□□ 0.52
SNRPA1-202ENST00000394082 RBBP8NLQ8NC74 664 aaPredicted RBP18.32■□□□□ 0.52
SNRPA1-202ENST00000394082 BHMTQ93088 406 aa18.32■□□□□ 0.52
SNRPA1-202ENST00000394082 MKRN2Q9H000 416 aaKnown RBP18.32■□□□□ 0.52
SNRPA1-202ENST00000394082 MMRN2Q9H8L6 949 aa18.32■□□□□ 0.52
SNRPA1-202ENST00000394082 ELOVL2Q9NXB9 296 aa18.32■□□□□ 0.52
SNRPA1-202ENST00000394082 STOML2Q9UJZ1 356 aa18.32■□□□□ 0.52
SNRPA1-202ENST00000394082 ZMIZ1Q9ULJ6 1067 aa18.32■□□□□ 0.52
SNRPA1-202ENST00000394082 MSRB2Q9Y3D2 182 aa18.32■□□□□ 0.52
SNRPA1-202ENST00000394082 XPO1O14980 1071 aaKnown RBP18.31■□□□□ 0.52
SNRPA1-202ENST00000394082 SLC16A3O15427 465 aaKnown RBP18.31■□□□□ 0.52
SNRPA1-202ENST00000394082 ZBED1O96006 694 aa18.31■□□□□ 0.52
SNRPA1-202ENST00000394082 IL12RB1P42701 662 aa18.31■□□□□ 0.52
SNRPA1-202ENST00000394082 SIM1P81133 766 aaPredicted RBP18.31■□□□□ 0.52
SNRPA1-202ENST00000394082 ZNF423Q2M1K9 1284 aa18.31■□□□□ 0.52
SNRPA1-202ENST00000394082 PLEKHG6Q3KR16 790 aa18.31■□□□□ 0.52
SNRPA1-202ENST00000394082 RSRC2Q7L4I2 434 aaKnown RBP18.31■□□□□ 0.52
SNRPA1-202ENST00000394082 DENND1CQ8IV53 801 aa18.31■□□□□ 0.52
SNRPA1-202ENST00000394082 ZC3H3Q8IXZ2 948 aaKnown RBP18.31■□□□□ 0.52
SNRPA1-202ENST00000394082 SCML4Q8N228 414 aa18.31■□□□□ 0.52
SNRPA1-202ENST00000394082 IRX2Q9BZI1 471 aaPredicted RBP18.31■□□□□ 0.52
SNRPA1-202ENST00000394082 PCED1AQ9H1Q7 454 aa18.31■□□□□ 0.52
SNRPA1-202ENST00000394082 RMND1Q9NWS8 449 aa18.31■□□□□ 0.52
SNRPA1-202ENST00000394082 KIAA1257Q9ULG3 409 aa18.31■□□□□ 0.52
SNRPA1-202ENST00000394082 HBS1LQ9Y450 684 aaKnown RBP18.31■□□□□ 0.52
SNRPA1-202ENST00000394082 ADAMTS9Q9P2N4 1935 aa18.3■□□□□ 0.52
SNRPA1-202ENST00000394082 SYNCRIPO60506 623 aaKnown RBP18.3■□□□□ 0.52
SNRPA1-202ENST00000394082 LATS1O95835 1130 aa18.3■□□□□ 0.52
SNRPA1-202ENST00000394082 TOP3BO95985 862 aaKnown RBP18.3■□□□□ 0.52
SNRPA1-202ENST00000394082 SPINK2P20155 84 aa18.3■□□□□ 0.52
SNRPA1-202ENST00000394082 TKTL1P51854 596 aa18.3■□□□□ 0.52
SNRPA1-202ENST00000394082 BCAT1P54687 386 aa18.3■□□□□ 0.52
SNRPA1-202ENST00000394082 YWHAEP62258 255 aaKnown RBP18.3■□□□□ 0.52
SNRPA1-202ENST00000394082 MPPE1Q53F39 396 aa18.3■□□□□ 0.52
SNRPA1-202ENST00000394082 KIAA1324Q6UXG2 1013 aaKnown RBP18.3■□□□□ 0.52
SNRPA1-202ENST00000394082 BHLHA9Q7RTU4 235 aa18.3■□□□□ 0.52
SNRPA1-202ENST00000394082 TMPRSS6Q8IU80 811 aa18.3■□□□□ 0.52
SNRPA1-202ENST00000394082 RGL4Q8IZJ4 473 aa18.3■□□□□ 0.52
SNRPA1-202ENST00000394082 SPRYD3Q8NCJ5 442 aa18.3■□□□□ 0.52
SNRPA1-202ENST00000394082 TOE1Q96GM8 510 aaKnown RBP18.3■□□□□ 0.52
SNRPA1-202ENST00000394082 ARID3AQ99856 593 aa18.3■□□□□ 0.52
SNRPA1-202ENST00000394082 GTPBP4Q9BZE4 634 aaKnown RBP18.3■□□□□ 0.52
SNRPA1-202ENST00000394082 SLC6A17Q9H1V8 727 aa18.3■□□□□ 0.52
SNRPA1-202ENST00000394082 FSCN3Q9NQT6 498 aa18.3■□□□□ 0.52
SNRPA1-202ENST00000394082 FREM2Q5SZK8 3169 aa18.3■□□□□ 0.52
SNRPA1-202ENST00000394082 IGF2RP11717 2491 aa18.3■□□□□ 0.52
SNRPA1-202ENST00000394082 FAM208BQ5VWN6 2430 aa18.29■□□□□ 0.52
SNRPA1-202ENST00000394082 CKAP5Q14008 2032 aa18.29■□□□□ 0.52
SNRPA1-202ENST00000394082 A0A1B0GTW7 788 aa18.29■□□□□ 0.52
SNRPA1-202ENST00000394082 SLC12A8A0AV02 714 aa18.29■□□□□ 0.52
SNRPA1-202ENST00000394082 NCAM1P13591 858 aa18.29■□□□□ 0.52
SNRPA1-202ENST00000394082 HARS2P49590 506 aaKnown RBP18.29■□□□□ 0.52
SNRPA1-202ENST00000394082 TPMTP51580 245 aa18.29■□□□□ 0.52
SNRPA1-202ENST00000394082 FKBP3Q00688 224 aaKnown RBP18.29■□□□□ 0.52
SNRPA1-202ENST00000394082 BST2Q10589 180 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms