RNA–Protein interactions for RNA: ENST00000394055.7

CDH16-202, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-202ENST00000394055 GALNTL6Q49A17 601 aa15.2■□□□□ 0.02
CDH16-202ENST00000394055 EFHC1Q5JVL4 640 aa15.2■□□□□ 0.02
CDH16-202ENST00000394055 SYPL2Q5VXT5 272 aa15.2■□□□□ 0.02
CDH16-202ENST00000394055 HEATR6Q6AI08 1181 aaKnown RBP15.2■□□□□ 0.02
CDH16-202ENST00000394055 GAD1Q99259 594 aa15.2■□□□□ 0.02
CDH16-202ENST00000394055 DUSP16Q9BY84 665 aa15.2■□□□□ 0.02
CDH16-202ENST00000394055 LRRC4Q9HBW1 653 aa15.2■□□□□ 0.02
CDH16-202ENST00000394055 RXFP1Q9HBX9 757 aa15.2■□□□□ 0.02
CDH16-202ENST00000394055 ETAA1Q9NY74 926 aa15.2■□□□□ 0.02
CDH16-202ENST00000394055 MYO18AQ92614 2054 aaKnown RBP15.2■□□□□ 0.02
CDH16-202ENST00000394055 IQANK1A0A1B0GTG1 560 aa15.2■□□□□ 0.02
CDH16-202ENST00000394055 MFSD11O43934 449 aa15.2■□□□□ 0.02
CDH16-202ENST00000394055 LPXNO60711 386 aa15.2■□□□□ 0.02
CDH16-202ENST00000394055 VAV1P15498 845 aa15.2■□□□□ 0.02
CDH16-202ENST00000394055 NPR3P17342 541 aa15.2■□□□□ 0.02
CDH16-202ENST00000394055 ARL4AP40617 200 aa15.2■□□□□ 0.02
CDH16-202ENST00000394055 RPL34P49207 117 aaKnown RBP15.2■□□□□ 0.02
CDH16-202ENST00000394055 CCNHP51946 323 aaPredicted RBP15.2■□□□□ 0.02
CDH16-202ENST00000394055 OTUD1Q5VV17 481 aaPredicted RBP15.2■□□□□ 0.02
CDH16-202ENST00000394055 GRAMD1AQ96CP6 724 aa15.2■□□□□ 0.02
CDH16-202ENST00000394055 SMYD2Q9NRG4 433 aa15.2■□□□□ 0.02
CDH16-202ENST00000394055 KRT82Q9NSB4 513 aa15.2■□□□□ 0.02
CDH16-202ENST00000394055 STARD13Q9Y3M8 1113 aa15.2■□□□□ 0.02
CDH16-202ENST00000394055 M0QYT0 321 aa15.19■□□□□ 0.02
CDH16-202ENST00000394055 TSHRP16473 764 aa15.19■□□□□ 0.02
CDH16-202ENST00000394055 WARSP23381 471 aaKnown RBP15.19■□□□□ 0.02
CDH16-202ENST00000394055 SLC8A3P57103 927 aa15.19■□□□□ 0.02
CDH16-202ENST00000394055 ELF3P78545 371 aaPredicted RBP15.19■□□□□ 0.02
CDH16-202ENST00000394055 OVGP1Q12889 678 aa15.19■□□□□ 0.02
CDH16-202ENST00000394055 BMPR2Q13873 1038 aa15.19■□□□□ 0.02
CDH16-202ENST00000394055 SMAD1Q15797 465 aaKnown RBP15.19■□□□□ 0.02
CDH16-202ENST00000394055 SLC25A52Q3SY17 297 aa15.19■□□□□ 0.02
CDH16-202ENST00000394055 TRMT10BQ6PF06 316 aaKnown RBP15.19■□□□□ 0.02
CDH16-202ENST00000394055 CXCL17Q6UXB2 119 aa15.19■□□□□ 0.02
CDH16-202ENST00000394055 ZNF534Q76KX8 674 aa15.19■□□□□ 0.02
CDH16-202ENST00000394055 OTOAQ7RTW8 1153 aa15.19■□□□□ 0.02
CDH16-202ENST00000394055 PARP9Q8IXQ6 854 aa15.19■□□□□ 0.02
CDH16-202ENST00000394055 SIX6OS1Q8N1H7 587 aa15.19■□□□□ 0.02
CDH16-202ENST00000394055 WNT8BQ93098 351 aa15.19■□□□□ 0.02
CDH16-202ENST00000394055 QKIQ96PU8 341 aaKnown RBP eCLIP15.19■□□□□ 0.02
CDH16-202ENST00000394055 HNRNPABQ99729 332 aaKnown RBP15.19■□□□□ 0.02
CDH16-202ENST00000394055 FZD10Q9ULW2 581 aa15.19■□□□□ 0.02
CDH16-202ENST00000394055 CDY2AQ9Y6F7 541 aa15.19■□□□□ 0.02
CDH16-202ENST00000394055 TRIM49D1C9J1S8 452 aa15.19■□□□□ 0.02
CDH16-202ENST00000394055 MRPS5P82675 430 aaKnown RBP15.19■□□□□ 0.02
CDH16-202ENST00000394055 BNIP1Q12981 228 aa15.19■□□□□ 0.02
CDH16-202ENST00000394055 RNF43Q68DV7 783 aa15.19■□□□□ 0.02
CDH16-202ENST00000394055 CLEC20AQ6ZU45 233 aa15.19■□□□□ 0.02
CDH16-202ENST00000394055 STRADAQ7RTN6 431 aa15.19■□□□□ 0.02
CDH16-202ENST00000394055 LIMS2Q7Z4I7 341 aa15.19■□□□□ 0.02
CDH16-202ENST00000394055 VSIG1Q86XK7 387 aa15.19■□□□□ 0.02
CDH16-202ENST00000394055 TOP6BLQ8N6T0 577 aa15.19■□□□□ 0.02
CDH16-202ENST00000394055 PTPRN2Q92932 1015 aa15.19■□□□□ 0.02
CDH16-202ENST00000394055 FAM111AQ96PZ2 611 aa15.19■□□□□ 0.02
CDH16-202ENST00000394055 PPP1R10Q96QC0 940 aaKnown RBP15.19■□□□□ 0.02
CDH16-202ENST00000394055 KATNAL1Q9BW62 490 aa15.19■□□□□ 0.02
CDH16-202ENST00000394055 NPHS2Q9NP85 383 aa15.19■□□□□ 0.02
CDH16-202ENST00000394055 ARHGEF4Q9NR80 690 aa15.19■□□□□ 0.02
CDH16-202ENST00000394055 DDX43Q9NXZ2 648 aaKnown RBP15.19■□□□□ 0.02
CDH16-202ENST00000394055 SEPT10Q9P0V9 454 aa15.19■□□□□ 0.02
CDH16-202ENST00000394055 USP3Q9Y6I4 520 aa15.19■□□□□ 0.02
CDH16-202ENST00000394055 TNPO2O14787 897 aaKnown RBP15.18■□□□□ 0.02
CDH16-202ENST00000394055 C1QAP02745 245 aa15.18■□□□□ 0.02
CDH16-202ENST00000394055 ZFXP17010 805 aaPredicted RBP15.18■□□□□ 0.02
CDH16-202ENST00000394055 TKTL1P51854 596 aa15.18■□□□□ 0.02
CDH16-202ENST00000394055 CRADDP78560 199 aa15.18■□□□□ 0.02
CDH16-202ENST00000394055 GRIK3Q13003 919 aa15.18■□□□□ 0.02
CDH16-202ENST00000394055 UNC5AQ6ZN44 842 aa15.18■□□□□ 0.02
CDH16-202ENST00000394055 RGS9BPQ6ZS82 235 aa15.18■□□□□ 0.02
CDH16-202ENST00000394055 TP53INP2Q8IXH6 220 aa15.18■□□□□ 0.02
CDH16-202ENST00000394055 TTC17Q96AE7 1141 aa15.18■□□□□ 0.02
CDH16-202ENST00000394055 SENP8Q96LD8 212 aa15.18■□□□□ 0.02
CDH16-202ENST00000394055 TSPYL2Q9H2G4 693 aaPredicted RBP15.18■□□□□ 0.02
CDH16-202ENST00000394055 SSU72Q9NP77 194 aaKnown RBP15.18■□□□□ 0.02
CDH16-202ENST00000394055 CRTAC1Q9NQ79 661 aa15.18■□□□□ 0.02
CDH16-202ENST00000394055 ST3GAL5Q9UNP4 418 aa15.18■□□□□ 0.02
CDH16-202ENST00000394055 ZNF236Q9UL36 1845 aa15.18■□□□□ 0.02
CDH16-202ENST00000394055 NRP1O14786 923 aa15.18■□□□□ 0.02
CDH16-202ENST00000394055 GCATO75600 419 aa15.18■□□□□ 0.02
CDH16-202ENST00000394055 SCNN1AP37088 669 aa15.18■□□□□ 0.02
CDH16-202ENST00000394055 RGS2P41220 211 aa15.18■□□□□ 0.02
CDH16-202ENST00000394055 CLCNKBP51801 687 aa15.18■□□□□ 0.02
CDH16-202ENST00000394055 AP1B1Q10567 949 aa15.18■□□□□ 0.02
CDH16-202ENST00000394055 GNASQ5JWF2 1037 aa15.18■□□□□ 0.02
CDH16-202ENST00000394055 BSPRYQ5W0U4 402 aa15.18■□□□□ 0.02
CDH16-202ENST00000394055 RNF169Q8NCN4 708 aa15.18■□□□□ 0.02
CDH16-202ENST00000394055 ZNF483Q8TF39 744 aaPredicted RBP15.18■□□□□ 0.02
CDH16-202ENST00000394055 TFB1MQ8WVM0 346 aaKnown RBP15.18■□□□□ 0.02
CDH16-202ENST00000394055 HTR3CQ8WXA8 447 aa15.18■□□□□ 0.02
CDH16-202ENST00000394055 KLHL29Q96CT2 875 aa15.18■□□□□ 0.02
CDH16-202ENST00000394055 ERP27Q96DN0 273 aa15.18■□□□□ 0.02
CDH16-202ENST00000394055 KCNK16Q96T55 309 aa15.18■□□□□ 0.02
CDH16-202ENST00000394055 MYLK2Q9H1R3 596 aa15.18■□□□□ 0.02
CDH16-202ENST00000394055 ZNF638Q14966 1978 aaKnown RBP15.17■□□□□ 0.02
CDH16-202ENST00000394055 DAB1O75553 588 aa15.17■□□□□ 0.02
CDH16-202ENST00000394055 SPAG6O75602 509 aa15.17■□□□□ 0.02
CDH16-202ENST00000394055 PGK1P00558 417 aa15.17■□□□□ 0.02
CDH16-202ENST00000394055 GNAT1P11488 350 aa15.17■□□□□ 0.02
CDH16-202ENST00000394055 NEFHP12036 1026 aa15.17■□□□□ 0.02
CDH16-202ENST00000394055 NR2C2P49116 596 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms