RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 HOXC11O43248 304 aaPredicted RBP19.78■□□□□ 0.76
PDLIM7-204ENST00000393546 DAB1O75553 588 aa19.78■□□□□ 0.76
PDLIM7-204ENST00000393546 LATS1O95835 1130 aa19.78■□□□□ 0.76
PDLIM7-204ENST00000393546 IGLV3-27P01718 113 aa19.78■□□□□ 0.76
PDLIM7-204ENST00000393546 DRD1P21728 446 aa19.78■□□□□ 0.76
PDLIM7-204ENST00000393546 MATKP42679 507 aa19.78■□□□□ 0.76
PDLIM7-204ENST00000393546 RPS9P46781 194 aaKnown RBP19.78■□□□□ 0.76
PDLIM7-204ENST00000393546 ACAD10Q6JQN1 1059 aa19.78■□□□□ 0.76
PDLIM7-204ENST00000393546 PPP1R2P3Q6NXS1 205 aa19.78■□□□□ 0.76
PDLIM7-204ENST00000393546 TAC4Q86UU9 113 aa19.78■□□□□ 0.76
PDLIM7-204ENST00000393546 PHF13Q86YI8 300 aaPredicted RBP19.78■□□□□ 0.76
PDLIM7-204ENST00000393546 PRRX2Q99811 253 aa19.78■□□□□ 0.76
PDLIM7-204ENST00000393546 C11orf70Q9BRQ4 267 aa19.78■□□□□ 0.76
PDLIM7-204ENST00000393546 BBS2Q9BXC9 721 aa19.78■□□□□ 0.76
PDLIM7-204ENST00000393546 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.78■□□□□ 0.76
PDLIM7-204ENST00000393546 BZW2Q9Y6E2 419 aaKnown RBP19.78■□□□□ 0.76
PDLIM7-204ENST00000393546 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.77■□□□□ 0.76
PDLIM7-204ENST00000393546 GYPCP04921 128 aa19.77■□□□□ 0.76
PDLIM7-204ENST00000393546 CALB1P05937 261 aa19.77■□□□□ 0.76
PDLIM7-204ENST00000393546 SKILP12757 684 aa19.77■□□□□ 0.76
PDLIM7-204ENST00000393546 OPRD1P41143 372 aa19.77■□□□□ 0.76
PDLIM7-204ENST00000393546 EIF2DP41214 584 aaKnown RBP19.77■□□□□ 0.76
PDLIM7-204ENST00000393546 SLC11A2P49281 568 aa19.77■□□□□ 0.76
PDLIM7-204ENST00000393546 TRIM14Q14142 442 aa19.77■□□□□ 0.76
PDLIM7-204ENST00000393546 GAB4Q2WGN9 574 aa19.77■□□□□ 0.76
PDLIM7-204ENST00000393546 E4F1Q66K89 784 aaPredicted RBP19.77■□□□□ 0.76
PDLIM7-204ENST00000393546 SARM1Q6SZW1 724 aa19.77■□□□□ 0.76
PDLIM7-204ENST00000393546 ZNF571Q7Z3V5 609 aaPredicted RBP19.77■□□□□ 0.76
PDLIM7-204ENST00000393546 SYNPOQ8N3V7 929 aa19.77■□□□□ 0.76
PDLIM7-204ENST00000393546 CPXM2Q8N436 756 aa19.77■□□□□ 0.76
PDLIM7-204ENST00000393546 AZIN2Q96A70 460 aa19.77■□□□□ 0.76
PDLIM7-204ENST00000393546 SLC39A13Q96H72 371 aa19.77■□□□□ 0.76
PDLIM7-204ENST00000393546 FCRL2Q96LA5 508 aaPredicted RBP19.77■□□□□ 0.76
PDLIM7-204ENST00000393546 XPO6Q96QU8 1125 aaKnown RBP19.77■□□□□ 0.76
PDLIM7-204ENST00000393546 SYT11Q9BT88 431 aa19.77■□□□□ 0.76
PDLIM7-204ENST00000393546 TRIM5Q9C035 493 aa19.77■□□□□ 0.76
PDLIM7-204ENST00000393546 FAM204AQ9H8W3 233 aa19.77■□□□□ 0.76
PDLIM7-204ENST00000393546 FBRSL1Q9HCM7 1045 aaKnown RBP19.77■□□□□ 0.76
PDLIM7-204ENST00000393546 MARK1Q9P0L2 795 aa19.77■□□□□ 0.76
PDLIM7-204ENST00000393546 SLC12A6Q9UHW9 1150 aa19.77■□□□□ 0.76
PDLIM7-204ENST00000393546 HCN4Q9Y3Q4 1203 aa19.77■□□□□ 0.76
PDLIM7-204ENST00000393546 ZNF318Q5VUA4 2279 aa19.77■□□□□ 0.75
PDLIM7-204ENST00000393546 NEDD8-MDP1E9PL57 170 aa19.76■□□□□ 0.75
PDLIM7-204ENST00000393546 IRAK2O43187 625 aa19.76■□□□□ 0.75
PDLIM7-204ENST00000393546 IGLV3-25P01717 112 aa19.76■□□□□ 0.75
PDLIM7-204ENST00000393546 APOEP02649 317 aa19.76■□□□□ 0.75
PDLIM7-204ENST00000393546 CYBBP04839 570 aa19.76■□□□□ 0.75
PDLIM7-204ENST00000393546 TPM1P09493 284 aa19.76■□□□□ 0.75
PDLIM7-204ENST00000393546 CASP14P31944 242 aa19.76■□□□□ 0.75
PDLIM7-204ENST00000393546 SLC6A11P48066 632 aa19.76■□□□□ 0.75
PDLIM7-204ENST00000393546 C1QBPQ07021 282 aaKnown RBP19.76■□□□□ 0.75
PDLIM7-204ENST00000393546 CCINQ13939 588 aa19.76■□□□□ 0.75
PDLIM7-204ENST00000393546 PREPLQ4J6C6 727 aaPredicted RBP19.76■□□□□ 0.75
PDLIM7-204ENST00000393546 ADGRF1Q5T601 910 aa19.76■□□□□ 0.75
PDLIM7-204ENST00000393546 NAIF1Q69YI7 327 aaPredicted RBP19.76■□□□□ 0.75
PDLIM7-204ENST00000393546 FSTL4Q6MZW2 842 aa19.76■□□□□ 0.75
PDLIM7-204ENST00000393546 VSTM4Q8IW00 320 aa19.76■□□□□ 0.75
PDLIM7-204ENST00000393546 FAM217AQ8IXS0 508 aa19.76■□□□□ 0.75
PDLIM7-204ENST00000393546 NAT16Q8N8M0 369 aa19.76■□□□□ 0.75
PDLIM7-204ENST00000393546 RNF34Q969K3 372 aa19.76■□□□□ 0.75
PDLIM7-204ENST00000393546 PNKPQ96T60 521 aa19.76■□□□□ 0.75
PDLIM7-204ENST00000393546 DDX50Q9BQ39 737 aaKnown RBP19.76■□□□□ 0.75
PDLIM7-204ENST00000393546 KCNH6Q9H252 994 aa19.76■□□□□ 0.75
PDLIM7-204ENST00000393546 RBM12Q9NTZ6 932 aaKnown RBP19.76■□□□□ 0.75
PDLIM7-204ENST00000393546 TMEM51Q9NW97 253 aa19.76■□□□□ 0.75
PDLIM7-204ENST00000393546 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.76■□□□□ 0.75
PDLIM7-204ENST00000393546 DDIT4Q9NX09 232 aa19.76■□□□□ 0.75
PDLIM7-204ENST00000393546 STOML2Q9UJZ1 356 aa19.76■□□□□ 0.75
PDLIM7-204ENST00000393546 STAP1Q9ULZ2 295 aa19.76■□□□□ 0.75
PDLIM7-204ENST00000393546 KMT2EQ8IZD2 1858 aa19.75■□□□□ 0.75
PDLIM7-204ENST00000393546 SYNJ2BP-COX16A0A087WUM0 186 aa19.75■□□□□ 0.75
PDLIM7-204ENST00000393546 GALR2O43603 387 aaPredicted RBP19.75■□□□□ 0.75
PDLIM7-204ENST00000393546 ACSL4O60488 711 aa19.75■□□□□ 0.75
PDLIM7-204ENST00000393546 EGFP01133 1207 aa19.75■□□□□ 0.75
PDLIM7-204ENST00000393546 SERPING1P05155 500 aa19.75■□□□□ 0.75
PDLIM7-204ENST00000393546 SLC2A3P11169 496 aa19.75■□□□□ 0.75
PDLIM7-204ENST00000393546 TYRP14679 529 aa19.75■□□□□ 0.75
PDLIM7-204ENST00000393546 COL9A1P20849 921 aa19.75■□□□□ 0.75
PDLIM7-204ENST00000393546 PITX1P78337 314 aaPredicted RBP19.75■□□□□ 0.75
PDLIM7-204ENST00000393546 PTP4A2Q12974 167 aa19.75■□□□□ 0.75
PDLIM7-204ENST00000393546 FBXO43Q4G163 708 aa19.75■□□□□ 0.75
PDLIM7-204ENST00000393546 TDRD12Q587J7 1177 aaKnown RBP19.75■□□□□ 0.75
PDLIM7-204ENST00000393546 ZC3H12AQ5D1E8 599 aaKnown RBP19.75■□□□□ 0.75
PDLIM7-204ENST00000393546 ARCQ7LC44 396 aa19.75■□□□□ 0.75
PDLIM7-204ENST00000393546 PHLDB2Q86SQ0 1253 aa19.75■□□□□ 0.75
PDLIM7-204ENST00000393546 GAS2L3Q86XJ1 694 aa19.75■□□□□ 0.75
PDLIM7-204ENST00000393546 IER2Q9BTL4 223 aa19.75■□□□□ 0.75
PDLIM7-204ENST00000393546 CHRDQ9H2X0 955 aa19.75■□□□□ 0.75
PDLIM7-204ENST00000393546 COX16Q9P0S2 106 aa19.75■□□□□ 0.75
PDLIM7-204ENST00000393546 DEC1Q9P2X7 70 aa19.75■□□□□ 0.75
PDLIM7-204ENST00000393546 TMEM59LQ9UK28 342 aa19.75■□□□□ 0.75
PDLIM7-204ENST00000393546 TMCO5BA8MYB1 307 aa19.74■□□□□ 0.75
PDLIM7-204ENST00000393546 M0QYT0 321 aa19.74■□□□□ 0.75
PDLIM7-204ENST00000393546 F9P00740 461 aa19.74■□□□□ 0.75
PDLIM7-204ENST00000393546 APODP05090 189 aa19.74■□□□□ 0.75
PDLIM7-204ENST00000393546 GZMAP12544 262 aa19.74■□□□□ 0.75
PDLIM7-204ENST00000393546 CCR1P32246 355 aa19.74■□□□□ 0.75
PDLIM7-204ENST00000393546 NME3Q13232 169 aa19.74■□□□□ 0.75
PDLIM7-204ENST00000393546 EIF4EBP2Q13542 120 aaPredicted RBP19.74■□□□□ 0.75
PDLIM7-204ENST00000393546 TSR1Q2NL82 804 aaKnown RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms