RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 HHIPQ96QV1 700 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 SPAG5Q96R06 1193 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 ERGIC2Q96RQ1 377 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 PNKPQ96T60 521 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 LHX5Q9H2C1 402 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 SYNCQ9H7C4 482 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 OLA1Q9NTK5 396 aaKnown RBP8□□□□□ -1.13
HMGB3P1-201ENST00000393368 DNAJC17Q9NVM6 304 aaKnown RBP8□□□□□ -1.13
HMGB3P1-201ENST00000393368 XPO7Q9UIA9 1087 aaKnown RBP8□□□□□ -1.13
HMGB3P1-201ENST00000393368 NOCTQ9UK39 431 aaKnown RBP8□□□□□ -1.13
HMGB3P1-201ENST00000393368 FBXO4Q9UKT5 387 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 MYH10P35580 1976 aa8□□□□□ -1.13
HMGB3P1-201ENST00000393368 FRYLO94915 3013 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 GOLGA8SH3BPF8 625 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 SERPINC1P01008 464 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 IGLV3-27P01718 113 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 APODP05090 189 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 HNRNPLP14866 589 aaKnown RBP eCLIP7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 TFE3P19532 575 aaPredicted RBP7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 PTMSP20962 102 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 SLC6A4P31645 630 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 NBL1P41271 181 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 WASP42768 502 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 HARS2P49590 506 aaKnown RBP7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 MRE11P49959 708 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 CCR3P51677 355 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 TBX4P57082 545 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 BPIFB4P59827 614 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 RNASE9P60153 205 aaKnown RBP7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 YWHAZP63104 245 aaKnown RBP7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 FMO1Q01740 532 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 NFKBIBQ15653 356 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 DCAF6Q58WW2 860 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 C10orf76Q5T2E6 689 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 OTUD1Q5VV17 481 aaPredicted RBP7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 FYB2Q5VWT5 728 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 NADSYN1Q6IA69 706 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 GRAMD4Q6IC98 578 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 RFWD3Q6PCD5 774 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 OLFML1Q6UWY5 402 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 ASCL5Q7RTU5 278 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 DEFB106AQ8N104 65 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 ALLCQ8N6M5 410 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 TMEM35BQ8NCS4 154 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 SLC30A5Q8TAD4 765 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 IPO4Q8TEX9 1081 aaKnown RBP7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 USP33Q8TEY7 942 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 FCRL2Q96LA5 508 aaPredicted RBP7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 NOX5Q96PH1 765 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 PCDHB18PQ96TA0 734 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 ADAM33Q9BZ11 813 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 FAM204AQ9H8W3 233 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 POPDC2Q9HBU9 364 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 MARK1Q9P0L2 795 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 CALCOCO1Q9P1Z2 691 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 DEC1Q9P2X7 70 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 HCN2Q9UL51 889 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 HBS1LQ9Y450 684 aaKnown RBP7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 CEP83Q9Y592 693 aa7.99□□□□□ -1.13
HMGB3P1-201ENST00000393368 A0A1B0GTH6 734 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 TBC1D3BA6NDS4 549 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 PRRT4C9JH25 899 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 SGK1O00141 431 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 IRAK2O43187 625 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 SART1O43290 800 aaKnown RBP7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 CACNG3O60359 315 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 GJB6O95452 261 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 KLF8O95600 359 aaPredicted RBP7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 TRUB2O95900 331 aaKnown RBP7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 PENKP01210 267 aaPredicted RBP7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 CDH5P33151 784 aaPredicted RBP7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 GGCXP38435 758 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 EIF2DP41214 584 aaKnown RBP7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 STAT1P42224 750 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 GRIA2P42262 883 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 DGKGP49619 791 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 NUMBP49757 651 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 NOMO3P69849 1222 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 FANCCQ00597 558 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 CDR2Q01850 454 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 SLC6A3Q01959 620 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 NME3Q13232 169 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 DMC1Q14565 340 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 LPAL2Q16609 132 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 GEN1Q17RS7 908 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 FAM133BQ5BKY9 247 aaKnown RBP7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 ZC3H12AQ5D1E8 599 aaKnown RBP7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 EGFLAMQ63HQ2 1017 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 E4F1Q66K89 784 aaPredicted RBP7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 MMS22LQ6ZRQ5 1243 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 CACNA2D4Q7Z3S7 1137 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 ERICH1Q86X53 443 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 XYLT1Q86Y38 959 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 DNAAF5Q86Y56 855 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 FAM217AQ8IXS0 508 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 SYNPOQ8N3V7 929 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 TERB1Q8NA31 727 aa7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 TXNDC5Q8NBS9 432 aaKnown RBP7.98□□□□□ -1.13
HMGB3P1-201ENST00000393368 DDI1Q8WTU0 396 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms