RNA–Protein interactions for RNA: ENST00000393301.4

CTSC-202, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-202ENST00000393301 UBR7Q8N806 425 aa12.96□□□□□ -0.33
CTSC-202ENST00000393301 ANKRD52Q8NB46 1076 aa12.96□□□□□ -0.33
CTSC-202ENST00000393301 ENOX1Q8TC92 643 aaKnown RBP12.96□□□□□ -0.33
CTSC-202ENST00000393301 IPO4Q8TEX9 1081 aaKnown RBP12.96□□□□□ -0.33
CTSC-202ENST00000393301 PIGKQ92643 395 aa12.96□□□□□ -0.33
CTSC-202ENST00000393301 ERCC4Q92889 916 aaPredicted RBP12.96□□□□□ -0.33
CTSC-202ENST00000393301 TMEM176AQ96HP8 235 aa12.96□□□□□ -0.33
CTSC-202ENST00000393301 BPIFA3Q9BQP9 254 aa12.96□□□□□ -0.33
CTSC-202ENST00000393301 TMEM121BQ9BXQ6 578 aaPredicted RBP12.96□□□□□ -0.33
CTSC-202ENST00000393301 NUSAP1Q9BXS6 441 aaKnown RBP12.96□□□□□ -0.33
CTSC-202ENST00000393301 CISHQ9NSE2 258 aa12.96□□□□□ -0.33
CTSC-202ENST00000393301 ANO10Q9NW15 660 aa12.96□□□□□ -0.33
CTSC-202ENST00000393301 BCCIPQ9P287 314 aaKnown RBP eCLIP12.96□□□□□ -0.33
CTSC-202ENST00000393301 STOML2Q9UJZ1 356 aa12.96□□□□□ -0.33
CTSC-202ENST00000393301 CABIN1Q9Y6J0 2220 aa12.96□□□□□ -0.34
CTSC-202ENST00000393301 ADAMTS9Q9P2N4 1935 aa12.96□□□□□ -0.34
CTSC-202ENST00000393301 FREM2Q5SZK8 3169 aa12.95□□□□□ -0.34
CTSC-202ENST00000393301 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.95□□□□□ -0.34
CTSC-202ENST00000393301 IGLV3-19P01714 112 aa12.95□□□□□ -0.34
CTSC-202ENST00000393301 SERPINF2P08697 491 aa12.95□□□□□ -0.34
CTSC-202ENST00000393301 EPB41P11171 864 aaKnown RBP12.95□□□□□ -0.34
CTSC-202ENST00000393301 CD58P19256 250 aa12.95□□□□□ -0.34
CTSC-202ENST00000393301 NDUFV2P19404 249 aa12.95□□□□□ -0.34
CTSC-202ENST00000393301 MFAP3P55082 362 aa12.95□□□□□ -0.34
CTSC-202ENST00000393301 SEMA3BQ13214 749 aa12.95□□□□□ -0.34
CTSC-202ENST00000393301 EIF4HQ15056 248 aaKnown RBP12.95□□□□□ -0.34
CTSC-202ENST00000393301 DUOXA1Q1HG43 343 aa12.95□□□□□ -0.34
CTSC-202ENST00000393301 C10orf120Q5SQS8 335 aa12.95□□□□□ -0.34
CTSC-202ENST00000393301 TOGARAM2Q6ZUX3 1019 aa12.95□□□□□ -0.34
CTSC-202ENST00000393301 TMEFF1Q8IYR6 380 aa12.95□□□□□ -0.34
CTSC-202ENST00000393301 FRMD1Q8N878 549 aa12.95□□□□□ -0.34
CTSC-202ENST00000393301 NELFBQ8WX92 580 aa12.95□□□□□ -0.34
CTSC-202ENST00000393301 ZNF419Q96HQ0 510 aaPredicted RBP12.95□□□□□ -0.34
CTSC-202ENST00000393301 PIWIL1Q96J94 861 aaKnown RBP12.95□□□□□ -0.34
CTSC-202ENST00000393301 MRGPRX1Q96LB2 322 aa12.95□□□□□ -0.34
CTSC-202ENST00000393301 MED15Q96RN5 788 aa12.95□□□□□ -0.34
CTSC-202ENST00000393301 ACOX2Q99424 681 aa12.95□□□□□ -0.34
CTSC-202ENST00000393301 SLC2A11Q9BYW1 496 aa12.95□□□□□ -0.34
CTSC-202ENST00000393301 IRX2Q9BZI1 471 aaPredicted RBP12.95□□□□□ -0.34
CTSC-202ENST00000393301 ZDHHC4Q9NPG8 344 aa12.95□□□□□ -0.34
CTSC-202ENST00000393301 USP36Q9P275 1121 aaKnown RBP12.95□□□□□ -0.34
CTSC-202ENST00000393301 THAP10Q9P2Z0 257 aaPredicted RBP12.95□□□□□ -0.34
CTSC-202ENST00000393301 NAGPAQ9UK23 515 aa12.95□□□□□ -0.34
CTSC-202ENST00000393301 MAPK8IP1Q9UQF2 711 aa12.95□□□□□ -0.34
CTSC-202ENST00000393301 XPO1O14980 1071 aaKnown RBP12.94□□□□□ -0.34
CTSC-202ENST00000393301 MDM4O15151 490 aa12.94□□□□□ -0.34
CTSC-202ENST00000393301 CLSTN1O94985 981 aa12.94□□□□□ -0.34
CTSC-202ENST00000393301 LATS1O95835 1130 aa12.94□□□□□ -0.34
CTSC-202ENST00000393301 ENGP17813 658 aa12.94□□□□□ -0.34
CTSC-202ENST00000393301 ITPKAP23677 461 aa12.94□□□□□ -0.34
CTSC-202ENST00000393301 BCAT1P54687 386 aa12.94□□□□□ -0.34
CTSC-202ENST00000393301 ZNF445P59923 1031 aa12.94□□□□□ -0.34
CTSC-202ENST00000393301 ZNF33AQ06730 810 aa12.94□□□□□ -0.34
CTSC-202ENST00000393301 ZNF252P-AS1Q0IIN9 211 aa12.94□□□□□ -0.34
CTSC-202ENST00000393301 TRIP4Q15650 581 aaPredicted RBP12.94□□□□□ -0.34
CTSC-202ENST00000393301 STX1AQ16623 288 aa12.94□□□□□ -0.34
CTSC-202ENST00000393301 DPCR1Q3MIW9 517 aa12.94□□□□□ -0.34
CTSC-202ENST00000393301 PKDCCQ504Y2 493 aa12.94□□□□□ -0.34
CTSC-202ENST00000393301 SH3PXD2AQ5TCZ1 1133 aa12.94□□□□□ -0.34
CTSC-202ENST00000393301 SDE2Q6IQ49 451 aa12.94□□□□□ -0.34
CTSC-202ENST00000393301 KIAA1211LQ6NV74 962 aa12.94□□□□□ -0.34
CTSC-202ENST00000393301 TPGS1Q6ZTW0 290 aa12.94□□□□□ -0.34
CTSC-202ENST00000393301 PIGZQ86VD9 579 aa12.94□□□□□ -0.34
CTSC-202ENST00000393301 TTC30AQ86WT1 665 aa12.94□□□□□ -0.34
CTSC-202ENST00000393301 SLC41A1Q8IVJ1 513 aa12.94□□□□□ -0.34
CTSC-202ENST00000393301 TRIM59Q8IWR1 403 aa12.94□□□□□ -0.34
CTSC-202ENST00000393301 CHPFQ8IZ52 775 aa12.94□□□□□ -0.34
CTSC-202ENST00000393301 PLD4Q96BZ4 506 aa12.94□□□□□ -0.34
CTSC-202ENST00000393301 FUCA2Q9BTY2 467 aa12.94□□□□□ -0.34
CTSC-202ENST00000393301 THAP9Q9H5L6 903 aa12.94□□□□□ -0.34
CTSC-202ENST00000393301 OLA1Q9NTK5 396 aaKnown RBP12.94□□□□□ -0.34
CTSC-202ENST00000393301 SLC6A14Q9UN76 642 aa12.94□□□□□ -0.34
CTSC-202ENST00000393301 DSPP15924 2871 aaKnown RBP12.94□□□□□ -0.34
CTSC-202ENST00000393301 LRRC10BA6NIK2 292 aa12.93□□□□□ -0.34
CTSC-202ENST00000393301 BIN1O00499 593 aa12.93□□□□□ -0.34
CTSC-202ENST00000393301 GIPC1O14908 333 aa12.93□□□□□ -0.34
CTSC-202ENST00000393301 MAP3K13O43283 966 aa12.93□□□□□ -0.34
CTSC-202ENST00000393301 GJB3O75712 270 aa12.93□□□□□ -0.34
CTSC-202ENST00000393301 KRT37O76014 449 aa12.93□□□□□ -0.34
CTSC-202ENST00000393301 PROS1P07225 676 aa12.93□□□□□ -0.34
CTSC-202ENST00000393301 CORO1AP31146 461 aaKnown RBP12.93□□□□□ -0.34
CTSC-202ENST00000393301 RPL6Q02878 288 aaKnown RBP12.93□□□□□ -0.34
CTSC-202ENST00000393301 CUL2Q13617 745 aa12.93□□□□□ -0.34
CTSC-202ENST00000393301 CBWD6Q4V339 395 aa12.93□□□□□ -0.34
CTSC-202ENST00000393301 CBWD3Q5JTY5 395 aa12.93□□□□□ -0.34
CTSC-202ENST00000393301 CBWD5Q5RIA9 395 aa12.93□□□□□ -0.34
CTSC-202ENST00000393301 SASS6Q6UVJ0 657 aa12.93□□□□□ -0.34
CTSC-202ENST00000393301 KCTD13Q8WZ19 329 aa12.93□□□□□ -0.34
CTSC-202ENST00000393301 DNASE2BQ8WZ79 361 aa12.93□□□□□ -0.34
CTSC-202ENST00000393301 FOXJ1Q92949 421 aa12.93□□□□□ -0.34
CTSC-202ENST00000393301 SLC35C1Q96A29 364 aa12.93□□□□□ -0.34
CTSC-202ENST00000393301 HEXIM2Q96MH2 286 aaKnown RBP12.93□□□□□ -0.34
CTSC-202ENST00000393301 ARID3AQ99856 593 aa12.93□□□□□ -0.34
CTSC-202ENST00000393301 DNAAF2Q9NVR5 837 aaKnown RBP12.93□□□□□ -0.34
CTSC-202ENST00000393301 ARMCX3Q9UH62 379 aaPredicted RBP12.93□□□□□ -0.34
CTSC-202ENST00000393301 NUDT5Q9UKK9 219 aa12.93□□□□□ -0.34
CTSC-202ENST00000393301 AGO1Q9UL18 857 aaKnown RBP12.93□□□□□ -0.34
CTSC-202ENST00000393301 KIAA1257Q9ULG3 409 aa12.93□□□□□ -0.34
CTSC-202ENST00000393301 STRIP2Q9ULQ0 834 aa12.93□□□□□ -0.34
CTSC-202ENST00000393301 HBS1LQ9Y450 684 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms