RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 SLC9A7Q96T83 725 aa18.84■□□□□ 0.61
ACTN4-202ENST00000390009 STARD7Q9NQZ5 370 aa18.84■□□□□ 0.61
ACTN4-202ENST00000390009 EOMESO95936 686 aa18.83■□□□□ 0.61
ACTN4-202ENST00000390009 BRAFP15056 766 aa18.83■□□□□ 0.61
ACTN4-202ENST00000390009 FAXCQ5TGI0 409 aa18.83■□□□□ 0.61
ACTN4-202ENST00000390009 C3orf62Q6ZUJ4 267 aa18.83■□□□□ 0.61
ACTN4-202ENST00000390009 LRRTM3Q86VH5 581 aa18.83■□□□□ 0.61
ACTN4-202ENST00000390009 PALM2Q8IXS6 379 aa18.83■□□□□ 0.61
ACTN4-202ENST00000390009 THEM5Q8N1Q8 247 aa18.83■□□□□ 0.61
ACTN4-202ENST00000390009 SLC43A3Q8NBI5 491 aa18.83■□□□□ 0.61
ACTN4-202ENST00000390009 LINC01599Q8WXQ3 324 aa18.83■□□□□ 0.61
ACTN4-202ENST00000390009 OLFM3Q96PB7 478 aa18.83■□□□□ 0.61
ACTN4-202ENST00000390009 PRMT1Q99873 361 aaKnown RBP18.83■□□□□ 0.61
ACTN4-202ENST00000390009 PPCSQ9HAB8 311 aa18.83■□□□□ 0.61
ACTN4-202ENST00000390009 PRDM16Q9HAZ2 1276 aa18.83■□□□□ 0.61
ACTN4-202ENST00000390009 WDR6Q9NNW5 1121 aaKnown RBP18.83■□□□□ 0.61
ACTN4-202ENST00000390009 HMX1Q9NP08 348 aaPredicted RBP18.83■□□□□ 0.61
ACTN4-202ENST00000390009 RABGEF1Q9UJ41 708 aa18.83■□□□□ 0.61
ACTN4-202ENST00000390009 ACTL7BQ9Y614 415 aa18.83■□□□□ 0.61
ACTN4-202ENST00000390009 ARHGEF37A1IGU5 675 aa18.83■□□□□ 0.6
ACTN4-202ENST00000390009 RASA4BC9J798 803 aa18.83■□□□□ 0.6
ACTN4-202ENST00000390009 RASA4O43374 803 aa18.83■□□□□ 0.6
ACTN4-202ENST00000390009 CREB3O43889 395 aa18.83■□□□□ 0.6
ACTN4-202ENST00000390009 GNRH1P01148 92 aa18.83■□□□□ 0.6
ACTN4-202ENST00000390009 AIF1P55008 147 aa18.83■□□□□ 0.6
ACTN4-202ENST00000390009 HEATR6Q6AI08 1181 aaKnown RBP18.83■□□□□ 0.6
ACTN4-202ENST00000390009 C4orf22Q6V702 233 aa18.83■□□□□ 0.6
ACTN4-202ENST00000390009 CHMP6Q96FZ7 201 aa18.83■□□□□ 0.6
ACTN4-202ENST00000390009 KCNK9Q9NPC2 374 aa18.83■□□□□ 0.6
ACTN4-202ENST00000390009 DMAP1Q9NPF5 467 aaPredicted RBP18.83■□□□□ 0.6
ACTN4-202ENST00000390009 CHMP2BQ9UQN3 213 aa18.83■□□□□ 0.6
ACTN4-202ENST00000390009 MYO18AQ92614 2054 aaKnown RBP18.82■□□□□ 0.6
ACTN4-202ENST00000390009 MFSD11O43934 449 aa18.82■□□□□ 0.6
ACTN4-202ENST00000390009 B4GALT3O60512 393 aa18.82■□□□□ 0.6
ACTN4-202ENST00000390009 GCATO75600 419 aa18.82■□□□□ 0.6
ACTN4-202ENST00000390009 DGKIO75912 1065 aa18.82■□□□□ 0.6
ACTN4-202ENST00000390009 TYMPP19971 482 aa18.82■□□□□ 0.6
ACTN4-202ENST00000390009 ADRA1BP35368 520 aa18.82■□□□□ 0.6
ACTN4-202ENST00000390009 MAGEA6P43360 314 aa18.82■□□□□ 0.6
ACTN4-202ENST00000390009 NR1H3Q13133 447 aa18.82■□□□□ 0.6
ACTN4-202ENST00000390009 CLLU1OSQ5K130 101 aa18.82■□□□□ 0.6
ACTN4-202ENST00000390009 BZW1Q7L1Q6 419 aaKnown RBP18.82■□□□□ 0.6
ACTN4-202ENST00000390009 ZNF280BQ86YH2 543 aa18.82■□□□□ 0.6
ACTN4-202ENST00000390009 NTAN1Q96AB6 310 aa18.82■□□□□ 0.6
ACTN4-202ENST00000390009 PGAP3Q96FM1 320 aaPredicted RBP18.82■□□□□ 0.6
ACTN4-202ENST00000390009 CCDC134Q9H6E4 229 aa18.82■□□□□ 0.6
ACTN4-202ENST00000390009 ETNK1Q9HBU6 452 aa18.82■□□□□ 0.6
ACTN4-202ENST00000390009 SLC24A2Q9UI40 661 aa18.82■□□□□ 0.6
ACTN4-202ENST00000390009 DDHD2O94830 711 aa18.82■□□□□ 0.6
ACTN4-202ENST00000390009 APRTP07741 180 aa18.82■□□□□ 0.6
ACTN4-202ENST00000390009 ELK3P41970 407 aa18.82■□□□□ 0.6
ACTN4-202ENST00000390009 TSPY1Q01534 308 aa18.82■□□□□ 0.6
ACTN4-202ENST00000390009 MAPRE1Q15691 268 aaKnown RBP18.82■□□□□ 0.6
ACTN4-202ENST00000390009 QPCTQ16769 361 aa18.82■□□□□ 0.6
ACTN4-202ENST00000390009 PM20D1Q6GTS8 502 aa18.82■□□□□ 0.6
ACTN4-202ENST00000390009 TRABD2AQ86V40 505 aa18.82■□□□□ 0.6
ACTN4-202ENST00000390009 IGDCC3Q8IVU1 814 aa18.82■□□□□ 0.6
ACTN4-202ENST00000390009 FBF1Q8TES7 1133 aa18.82■□□□□ 0.6
ACTN4-202ENST00000390009 TFB1MQ8WVM0 346 aaKnown RBP18.82■□□□□ 0.6
ACTN4-202ENST00000390009 IRGQQ8WZA9 623 aa18.82■□□□□ 0.6
ACTN4-202ENST00000390009 EDEM1Q92611 657 aa18.82■□□□□ 0.6
ACTN4-202ENST00000390009 ZNF317Q96PQ6 595 aaPredicted RBP18.82■□□□□ 0.6
ACTN4-202ENST00000390009 FRMD8Q9BZ67 464 aaPredicted RBP18.82■□□□□ 0.6
ACTN4-202ENST00000390009 ACSS3Q9H6R3 686 aa18.82■□□□□ 0.6
ACTN4-202ENST00000390009 DDIT4Q9NX09 232 aa18.82■□□□□ 0.6
ACTN4-202ENST00000390009 RRN3Q9NYV6 651 aa18.82■□□□□ 0.6
ACTN4-202ENST00000390009 FETUBQ9UGM5 382 aa18.82■□□□□ 0.6
ACTN4-202ENST00000390009 TEX264Q9Y6I9 313 aa18.82■□□□□ 0.6
ACTN4-202ENST00000390009 COL4A4P53420 1690 aaPredicted RBP18.81■□□□□ 0.6
ACTN4-202ENST00000390009 C5orf60A6NFR6 353 aa18.81■□□□□ 0.6
ACTN4-202ENST00000390009 HACD1B0YJ81 288 aa18.81■□□□□ 0.6
ACTN4-202ENST00000390009 EEF2KO00418 725 aaKnown RBP18.81■□□□□ 0.6
ACTN4-202ENST00000390009 AVILO75366 819 aa18.81■□□□□ 0.6
ACTN4-202ENST00000390009 TSHRP16473 764 aa18.81■□□□□ 0.6
ACTN4-202ENST00000390009 IFNAR2P48551 515 aa18.81■□□□□ 0.6
ACTN4-202ENST00000390009 GEMIN4P57678 1058 aaKnown RBP18.81■□□□□ 0.6
ACTN4-202ENST00000390009 YWHAHQ04917 246 aaPredicted RBP18.81■□□□□ 0.6
ACTN4-202ENST00000390009 SCAPQ12770 1279 aa18.81■□□□□ 0.6
ACTN4-202ENST00000390009 RASA2Q15283 850 aa18.81■□□□□ 0.6
ACTN4-202ENST00000390009 VPS52Q8N1B4 723 aa18.81■□□□□ 0.6
ACTN4-202ENST00000390009 MGARPQ8TDB4 240 aa18.81■□□□□ 0.6
ACTN4-202ENST00000390009 MRRFQ96E11 262 aaKnown RBP18.81■□□□□ 0.6
ACTN4-202ENST00000390009 ANLNQ9NQW6 1124 aa18.81■□□□□ 0.6
ACTN4-202ENST00000390009 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.81■□□□□ 0.62e-7■■■□□ 15
ACTN4-202ENST00000390009 PSMC3IPQ9P2W1 217 aaPredicted RBP18.81■□□□□ 0.6
ACTN4-202ENST00000390009 FBXW11Q9UKB1 542 aa18.81■□□□□ 0.6
ACTN4-202ENST00000390009 PCDHB8Q9UN66 801 aa18.81■□□□□ 0.6
ACTN4-202ENST00000390009 SF3B1O75533 1304 aaKnown RBP eCLIP18.8■□□□□ 0.61e-6■■■■■ 66.7
ACTN4-202ENST00000390009 I6L893 689 aaPredicted RBP18.8■□□□□ 0.6
ACTN4-202ENST00000390009 METTL18O95568 372 aa18.8■□□□□ 0.6
ACTN4-202ENST00000390009 VAV1P15498 845 aa18.8■□□□□ 0.6
ACTN4-202ENST00000390009 ATP2A2P16615 1042 aaKnown RBP18.8■□□□□ 0.6
ACTN4-202ENST00000390009 FAM189BP81408 668 aa18.8■□□□□ 0.6
ACTN4-202ENST00000390009 DSC1Q08554 894 aa18.8■□□□□ 0.6
ACTN4-202ENST00000390009 CBLBQ13191 982 aa18.8■□□□□ 0.6
ACTN4-202ENST00000390009 DPYSQ14117 519 aa18.8■□□□□ 0.6
ACTN4-202ENST00000390009 MPP2Q14168 576 aa18.8■□□□□ 0.6
ACTN4-202ENST00000390009 EFTUD2Q15029 972 aaKnown RBP eCLIP18.8■□□□□ 0.65e-7■■■□□ 18.5
ACTN4-202ENST00000390009 LRRC14Q15048 493 aa18.8■□□□□ 0.6
ACTN4-202ENST00000390009 NOMO2Q5JPE7 1267 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms