RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 ZNF518BQ9C0D4 1074 aa18.3■□□□□ 0.52
SQSTM1-202ENST00000389805 STRIP2Q9ULQ0 834 aa18.3■□□□□ 0.52
SQSTM1-202ENST00000389805 MYOCOSA0A1B0GUC4 107 aa18.3■□□□□ 0.52
SQSTM1-202ENST00000389805 MAGEB3O15480 346 aa18.3■□□□□ 0.52
SQSTM1-202ENST00000389805 HBP1O60381 514 aa18.3■□□□□ 0.52
SQSTM1-202ENST00000389805 CST8O60676 142 aa18.3■□□□□ 0.52
SQSTM1-202ENST00000389805 C22orf31O95567 290 aa18.3■□□□□ 0.52
SQSTM1-202ENST00000389805 ZNF286BP0CG31 522 aa18.3■□□□□ 0.52
SQSTM1-202ENST00000389805 BTKQ06187 659 aa18.3■□□□□ 0.52
SQSTM1-202ENST00000389805 IGDCC3Q8IVU1 814 aa18.3■□□□□ 0.52
SQSTM1-202ENST00000389805 ACTL9Q8TC94 416 aa18.3■□□□□ 0.52
SQSTM1-202ENST00000389805 CXCL16Q9H2A7 254 aa18.3■□□□□ 0.52
SQSTM1-202ENST00000389805 RNF19AQ9NV58 838 aa18.3■□□□□ 0.52
SQSTM1-202ENST00000389805 RNF181Q9P0P0 153 aa18.3■□□□□ 0.52
SQSTM1-202ENST00000389805 PCDHGB4Q9UN71 923 aa18.3■□□□□ 0.52
SQSTM1-202ENST00000389805 TNFSF13BQ9Y275 285 aa18.3■□□□□ 0.52
SQSTM1-202ENST00000389805 PCDHGB5Q9Y5G0 923 aa18.3■□□□□ 0.52
SQSTM1-202ENST00000389805 A0A088AWK7 358 aa18.29■□□□□ 0.52
SQSTM1-202ENST00000389805 I3L4J1 428 aa18.29■□□□□ 0.52
SQSTM1-202ENST00000389805 GAS2O43903 313 aaKnown RBP18.29■□□□□ 0.52
SQSTM1-202ENST00000389805 VCPP55072 806 aaKnown RBP18.29■□□□□ 0.52
SQSTM1-202ENST00000389805 IRX4P78413 519 aa18.29■□□□□ 0.52
SQSTM1-202ENST00000389805 OTUD4Q01804 1114 aaKnown RBP18.29■□□□□ 0.52
SQSTM1-202ENST00000389805 SLC25A11Q02978 314 aaKnown RBP18.29■□□□□ 0.52
SQSTM1-202ENST00000389805 HIC1Q14526 733 aa18.29■□□□□ 0.52
SQSTM1-202ENST00000389805 KLHL38Q2WGJ6 581 aa18.29■□□□□ 0.52
SQSTM1-202ENST00000389805 KBTBD12Q3ZCT8 623 aa18.29■□□□□ 0.52
SQSTM1-202ENST00000389805 LRRC38Q5VT99 294 aa18.29■□□□□ 0.52
SQSTM1-202ENST00000389805 PAOXQ6QHF9 649 aa18.29■□□□□ 0.52
SQSTM1-202ENST00000389805 ZCCHC23Q6ZST2 131 aa18.29■□□□□ 0.52
SQSTM1-202ENST00000389805 ZNF513Q8N8E2 541 aaPredicted RBP18.29■□□□□ 0.52
SQSTM1-202ENST00000389805 CPT1BQ92523 772 aa18.29■□□□□ 0.52
SQSTM1-202ENST00000389805 APOPT1Q96IL0 206 aa18.29■□□□□ 0.52
SQSTM1-202ENST00000389805 SHOC2Q9UQ13 582 aa18.29■□□□□ 0.52
SQSTM1-202ENST00000389805 AKT3Q9Y243 479 aa18.29■□□□□ 0.52
SQSTM1-202ENST00000389805 OTOFQ9HC10 1997 aa18.29■□□□□ 0.52
SQSTM1-202ENST00000389805 CXCL11O14625 94 aa18.29■□□□□ 0.52
SQSTM1-202ENST00000389805 TMCC1O94876 653 aa18.29■□□□□ 0.52
SQSTM1-202ENST00000389805 DESP17661 470 aa18.29■□□□□ 0.52
SQSTM1-202ENST00000389805 GALK1P51570 392 aa18.29■□□□□ 0.52
SQSTM1-202ENST00000389805 YWHAEP62258 255 aaKnown RBP18.29■□□□□ 0.52
SQSTM1-202ENST00000389805 TMCO4Q5TGY1 634 aa18.29■□□□□ 0.52
SQSTM1-202ENST00000389805 PPP1R2P3Q6NXS1 205 aa18.29■□□□□ 0.52
SQSTM1-202ENST00000389805 CEP70Q8NHQ1 597 aa18.29■□□□□ 0.52
SQSTM1-202ENST00000389805 ALKBH8Q96BT7 664 aaKnown RBP18.29■□□□□ 0.52
SQSTM1-202ENST00000389805 CDCA5Q96FF9 252 aa18.29■□□□□ 0.52
SQSTM1-202ENST00000389805 CCDC28BQ9BUN5 200 aa18.29■□□□□ 0.52
SQSTM1-202ENST00000389805 KLHL4Q9C0H6 718 aa18.29■□□□□ 0.52
SQSTM1-202ENST00000389805 COQ9O75208 318 aa18.28■□□□□ 0.52
SQSTM1-202ENST00000389805 DHRS4L1P0CG22 281 aa18.28■□□□□ 0.52
SQSTM1-202ENST00000389805 PEX6Q13608 980 aa18.28■□□□□ 0.52
SQSTM1-202ENST00000389805 CHI3L2Q15782 390 aa18.28■□□□□ 0.52
SQSTM1-202ENST00000389805 DBN1Q16643 649 aa18.28■□□□□ 0.52
SQSTM1-202ENST00000389805 MAP1SQ66K74 1059 aaPredicted RBP18.28■□□□□ 0.52
SQSTM1-202ENST00000389805 XYLT1Q86Y38 959 aa18.28■□□□□ 0.52
SQSTM1-202ENST00000389805 CTAGE3PQ8IX95 158 aa18.28■□□□□ 0.52
SQSTM1-202ENST00000389805 HSPH1Q92598 858 aa18.28■□□□□ 0.52
SQSTM1-202ENST00000389805 SRPK1Q96SB4 655 aaKnown RBP18.28■□□□□ 0.52
SQSTM1-202ENST00000389805 MPHOSPH6Q99547 160 aaKnown RBP18.28■□□□□ 0.52
SQSTM1-202ENST00000389805 C20orf27Q9GZN8 174 aa18.28■□□□□ 0.52
SQSTM1-202ENST00000389805 GRAP2O75791 330 aa18.28■□□□□ 0.52
SQSTM1-202ENST00000389805 INHBAP08476 426 aa18.28■□□□□ 0.52
SQSTM1-202ENST00000389805 HPCAP84074 193 aa18.28■□□□□ 0.52
SQSTM1-202ENST00000389805 TTLL4Q14679 1199 aa18.28■□□□□ 0.52
SQSTM1-202ENST00000389805 SLC10A6Q3KNW5 377 aa18.28■□□□□ 0.52
SQSTM1-202ENST00000389805 DNAL1Q4LDG9 190 aa18.28■□□□□ 0.52
SQSTM1-202ENST00000389805 EFHC1Q5JVL4 640 aa18.28■□□□□ 0.52
SQSTM1-202ENST00000389805 TCHHL1Q5QJ38 904 aaPredicted RBP18.28■□□□□ 0.52
SQSTM1-202ENST00000389805 ARMCX2Q7L311 632 aa18.28■□□□□ 0.52
SQSTM1-202ENST00000389805 CXorf38Q8TB03 319 aa18.28■□□□□ 0.52
SQSTM1-202ENST00000389805 PIWIL1Q96J94 861 aaKnown RBP18.28■□□□□ 0.52
SQSTM1-202ENST00000389805 BCO2Q9BYV7 579 aa18.28■□□□□ 0.52
SQSTM1-202ENST00000389805 GRIP2Q9C0E4 1043 aa18.28■□□□□ 0.52
SQSTM1-202ENST00000389805 ERAP1Q9NZ08 941 aa18.28■□□□□ 0.52
SQSTM1-202ENST00000389805 A0A0G2JMZ2 1700 aa18.28■□□□□ 0.52
SQSTM1-202ENST00000389805 A0A0J9YVX5 310 aa18.27■□□□□ 0.52
SQSTM1-202ENST00000389805 COPEO14579 308 aa18.27■□□□□ 0.52
SQSTM1-202ENST00000389805 VILLO15195 856 aa18.27■□□□□ 0.52
SQSTM1-202ENST00000389805 MICAL2O94851 1124 aa18.27■□□□□ 0.52
SQSTM1-202ENST00000389805 TMEM63AO94886 807 aa18.27■□□□□ 0.52
SQSTM1-202ENST00000389805 ARF4P18085 180 aaPredicted RBP18.27■□□□□ 0.52
SQSTM1-202ENST00000389805 POLR2BP30876 1174 aaKnown RBP18.27■□□□□ 0.52
SQSTM1-202ENST00000389805 YWHAGP61981 247 aaKnown RBP eCLIP18.27■□□□□ 0.52
SQSTM1-202ENST00000389805 BASP1P80723 227 aaKnown RBP18.27■□□□□ 0.52
SQSTM1-202ENST00000389805 PTPN11Q06124 597 aaPredicted RBP18.27■□□□□ 0.52
SQSTM1-202ENST00000389805 HNRNPDQ14103 355 aaKnown RBP18.27■□□□□ 0.52
SQSTM1-202ENST00000389805 AMHR2Q16671 573 aa18.27■□□□□ 0.52
SQSTM1-202ENST00000389805 CHSY1Q86X52 802 aa18.27■□□□□ 0.52
SQSTM1-202ENST00000389805 HEXIM2Q96MH2 286 aaKnown RBP18.27■□□□□ 0.52
SQSTM1-202ENST00000389805 DHRS4Q9BTZ2 278 aa18.27■□□□□ 0.52
SQSTM1-202ENST00000389805 PACSIN3Q9UKS6 424 aa18.27■□□□□ 0.52
SQSTM1-202ENST00000389805 C15orf38-AP3S2A0A0A6YYH1 394 aa18.27■□□□□ 0.52
SQSTM1-202ENST00000389805 CAPN8A6NHC0 703 aa18.27■□□□□ 0.52
SQSTM1-202ENST00000389805 M0QYV0 167 aa18.27■□□□□ 0.52
SQSTM1-202ENST00000389805 FKBP6O75344 327 aa18.27■□□□□ 0.52
SQSTM1-202ENST00000389805 GJA5P36382 358 aa18.27■□□□□ 0.52
SQSTM1-202ENST00000389805 CHN2P52757 468 aa18.27■□□□□ 0.52
SQSTM1-202ENST00000389805 ZNF200P98182 395 aaPredicted RBP18.27■□□□□ 0.52
SQSTM1-202ENST00000389805 ARHGAP1Q07960 439 aa18.27■□□□□ 0.52
SQSTM1-202ENST00000389805 ARPINQ7Z6K5 226 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms