RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 PEX2P28328 305 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 TCF7P36402 384 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 CLCN3P51790 818 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 KRT72Q14CN4 511 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 ANO4Q32M45 955 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 EFCAB12Q6NXP0 572 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 MON1BQ7L1V2 547 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 LENG1Q96BZ8 264 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 VPS50Q96JG6 964 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 TUBGCP5Q96RT8 1024 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 SARS2Q9NP81 518 aaKnown RBP13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 XPNPEP3Q9NQH7 507 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 WRAP73Q9P2S5 460 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 PLLPQ9Y342 182 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 AP4B1Q9Y6B7 739 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 IGLV3-22A0A075B6J6 115 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 TRPC5OSA6NMA1 111 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 PFDN6O15212 129 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 SUPT7LO94864 414 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 IL18RAPO95256 599 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 MMP8P22894 467 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 GALNTL6Q49A17 601 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 C12orf56Q8IXR9 622 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 SLC7A14Q8TBB6 771 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 RNF139Q8WU17 664 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 DGCR14Q96DF8 476 aaKnown RBP13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 SORCS3Q9UPU3 1222 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 AP4S1Q9Y587 144 aa13.51□□□□□ -0.25
TRAPPC9-201ENST00000389328 F8W8V4 182 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 CHADO15335 359 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 MICAL2O94851 1124 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 S100BP04271 92 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 ABCE1P61221 599 aaKnown RBP13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 CDC16Q13042 620 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 RALGPS1Q5JS13 557 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 TLDC1Q6P9B6 456 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 ANKS1BQ7Z6G8 1248 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 PPHLN1Q8NEY8 458 aaKnown RBP13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 MFSD14AQ96MC6 490 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 GID8Q9NWU2 228 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 TSPAN16Q9UKR8 245 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 CLEC11AQ9Y240 323 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 KDM3BQ7LBC6 1761 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 ASTN2O75129 1339 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 DUOX1Q9NRD9 1551 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 E5RJQ4 531 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 TIMM44O43615 452 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 MAGEC1O60732 1142 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 GALK1P51570 392 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 NRLP54845 237 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 FUT11Q495W5 492 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 C6orf10Q5SRN2 563 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 AAGABQ6PD74 315 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 CCDC60Q8IWA6 550 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 CDC26Q8NHZ8 85 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 LENG9Q96B70 501 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 GLIS2Q9BZE0 524 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 PRKAG3Q9UGI9 489 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 MYRFQ9Y2G1 1151 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 HBS1LQ9Y450 684 aaKnown RBP13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 NALCNQ8IZF0 1738 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 PIGNO95427 931 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 BPGMP07738 259 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 HSPA1AP0DMV8 641 aaKnown RBP13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 HSPA1BP0DMV9 641 aaKnown RBP13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 STMN1P16949 149 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 NAGLUP54802 743 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 GDF10P55107 478 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 TMEM62Q0P6H9 643 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 WASHC5Q12768 1159 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 FAM83EQ2M2I3 478 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 CNPY1Q3B7I2 92 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 VWA5B1Q5TIE3 1220 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 XRRA1Q6P2D8 792 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 BANPQ8N9N5 519 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 NETO2Q8NC67 525 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 MBOAT7Q96N66 472 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 EPAS1Q99814 870 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 IDI2Q9BXS1 227 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 WDR41Q9HAD4 459 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 CCDC167Q9P0B6 97 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 AK5Q9Y6K8 562 aa13.5□□□□□ -0.25
TRAPPC9-201ENST00000389328 M0QYT0 321 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 APOA4P06727 396 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 CDKN2BP42772 138 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 NUP107P57740 925 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 PLIN5Q00G26 463 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 GRM1Q13255 1194 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 SATL1Q86VE3 508 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 BRSK2Q8IWQ3 736 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 DAW1Q8N136 415 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 PDCD6IPQ8WUM4 868 aaKnown RBP13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 NKD2Q969F2 451 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 DNAJC1Q96KC8 554 aaKnown RBP13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 CYLDQ9NQC7 956 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 ACSS2Q9NR19 701 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 NOD1Q9Y239 953 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 PMPCBO75439 489 aa13.49□□□□□ -0.25
TRAPPC9-201ENST00000389328 CD48P09326 243 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms