RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 SERPINB4P48594 390 aa15.47■□□□□ 0.07
SCFD2-201ENST00000388940 FAM110CQ1W6H9 321 aa15.47■□□□□ 0.07
SCFD2-201ENST00000388940 CTC1Q2NKJ3 1217 aa15.47■□□□□ 0.07
SCFD2-201ENST00000388940 SLC25A52Q3SY17 297 aa15.47■□□□□ 0.07
SCFD2-201ENST00000388940 TAF1BQ53T94 588 aaPredicted RBP15.47■□□□□ 0.07
SCFD2-201ENST00000388940 HEATR6Q6AI08 1181 aaKnown RBP15.47■□□□□ 0.07
SCFD2-201ENST00000388940 CCDC185Q8N715 623 aa15.47■□□□□ 0.07
SCFD2-201ENST00000388940 RFWD2Q8NHY2 731 aa15.47■□□□□ 0.07
SCFD2-201ENST00000388940 TBC1D31Q96DN5 1066 aa15.47■□□□□ 0.07
SCFD2-201ENST00000388940 TNIP3Q96KP6 325 aa15.47■□□□□ 0.07
SCFD2-201ENST00000388940 SRPK1Q96SB4 655 aaKnown RBP15.47■□□□□ 0.07
SCFD2-201ENST00000388940 SMYD2Q9NRG4 433 aa15.47■□□□□ 0.07
SCFD2-201ENST00000388940 DTLQ9NZJ0 730 aa15.47■□□□□ 0.07
SCFD2-201ENST00000388940 GNEQ9Y223 722 aaKnown RBP15.47■□□□□ 0.07
SCFD2-201ENST00000388940 PLLPQ9Y342 182 aa15.47■□□□□ 0.07
SCFD2-201ENST00000388940 RFPL1O75677 317 aa15.46■□□□□ 0.07
SCFD2-201ENST00000388940 YBX3P16989 372 aaKnown RBP eCLIP15.46■□□□□ 0.07
SCFD2-201ENST00000388940 WARSP23381 471 aaKnown RBP15.46■□□□□ 0.07
SCFD2-201ENST00000388940 SERPINB9P50453 376 aa15.46■□□□□ 0.07
SCFD2-201ENST00000388940 SARNPP82979 210 aaKnown RBP15.46■□□□□ 0.07
SCFD2-201ENST00000388940 SNX17Q15036 470 aa15.46■□□□□ 0.07
SCFD2-201ENST00000388940 UBXN11Q5T124 520 aa15.46■□□□□ 0.07
SCFD2-201ENST00000388940 BNIPLQ7Z465 357 aa15.46■□□□□ 0.07
SCFD2-201ENST00000388940 CLNKQ7Z7G1 428 aa15.46■□□□□ 0.07
SCFD2-201ENST00000388940 TOP6BLQ8N6T0 577 aa15.46■□□□□ 0.07
SCFD2-201ENST00000388940 SLC2A14Q8TDB8 520 aa15.46■□□□□ 0.07
SCFD2-201ENST00000388940 HNRNPABQ99729 332 aaKnown RBP15.46■□□□□ 0.07
SCFD2-201ENST00000388940 IQCGQ9H095 443 aaKnown RBP15.46■□□□□ 0.07
SCFD2-201ENST00000388940 TLE6Q9H808 572 aa15.46■□□□□ 0.07
SCFD2-201ENST00000388940 KCNK13Q9HB14 408 aa15.46■□□□□ 0.07
SCFD2-201ENST00000388940 RPL26L1Q9UNX3 145 aaKnown RBP15.46■□□□□ 0.07
SCFD2-201ENST00000388940 A8MUI8 341 aa15.45■□□□□ 0.06
SCFD2-201ENST00000388940 DYNC1LI2O43237 492 aaPredicted RBP15.45■□□□□ 0.06
SCFD2-201ENST00000388940 DAB1O75553 588 aa15.45■□□□□ 0.06
SCFD2-201ENST00000388940 AMPD1P23109 780 aa15.45■□□□□ 0.06
SCFD2-201ENST00000388940 ARL4AP40617 200 aa15.45■□□□□ 0.06
SCFD2-201ENST00000388940 STEAP4Q687X5 459 aa15.45■□□□□ 0.06
SCFD2-201ENST00000388940 TIFABQ6ZNK6 161 aa15.45■□□□□ 0.06
SCFD2-201ENST00000388940 MTDHQ86UE4 582 aaKnown RBP15.45■□□□□ 0.06
SCFD2-201ENST00000388940 TFB1MQ8WVM0 346 aaKnown RBP15.45■□□□□ 0.06
SCFD2-201ENST00000388940 HTR3CQ8WXA8 447 aa15.45■□□□□ 0.06
SCFD2-201ENST00000388940 NT5C3BQ969T7 300 aa15.45■□□□□ 0.06
SCFD2-201ENST00000388940 TTC17Q96AE7 1141 aa15.45■□□□□ 0.06
SCFD2-201ENST00000388940 MAGEB5Q9BZ81 275 aa15.45■□□□□ 0.06
SCFD2-201ENST00000388940 PIN4Q9Y237 131 aaKnown RBP15.45■□□□□ 0.06
SCFD2-201ENST00000388940 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.45■□□□□ 0.06
SCFD2-201ENST00000388940 SF3B1O75533 1304 aaKnown RBP eCLIP15.45■□□□□ 0.066e-6■■■■■ 122.4
SCFD2-201ENST00000388940 A0A0A0MRY4 1105 aa15.45■□□□□ 0.06
SCFD2-201ENST00000388940 HAS3O00219 553 aa15.45■□□□□ 0.06
SCFD2-201ENST00000388940 BGNP21810 368 aa15.45■□□□□ 0.06
SCFD2-201ENST00000388940 CNTFP26441 200 aa15.45■□□□□ 0.06
SCFD2-201ENST00000388940 PTPN4P29074 926 aa15.45■□□□□ 0.06
SCFD2-201ENST00000388940 ARFIP2P53365 341 aa15.45■□□□□ 0.06
SCFD2-201ENST00000388940 OVGP1Q12889 678 aa15.45■□□□□ 0.06
SCFD2-201ENST00000388940 MFSD10Q14728 455 aa15.45■□□□□ 0.06
SCFD2-201ENST00000388940 FAM182AQ5T1J6 154 aa15.45■□□□□ 0.06
SCFD2-201ENST00000388940 CDHR3Q6ZTQ4 885 aa15.45■□□□□ 0.06
SCFD2-201ENST00000388940 DEFB106AQ8N104 65 aa15.45■□□□□ 0.06
SCFD2-201ENST00000388940 LRRN4Q8WUT4 740 aa15.45■□□□□ 0.06
SCFD2-201ENST00000388940 SPATA13Q96N96 652 aa15.45■□□□□ 0.06
SCFD2-201ENST00000388940 PARK7Q99497 189 aaKnown RBP15.45■□□□□ 0.06
SCFD2-201ENST00000388940 APOL6Q9BWW8 343 aa15.45■□□□□ 0.06
SCFD2-201ENST00000388940 DUSP16Q9BY84 665 aa15.45■□□□□ 0.06
SCFD2-201ENST00000388940 ALG13Q9NP73 1137 aaKnown RBP15.45■□□□□ 0.06
SCFD2-201ENST00000388940 EIF2B3Q9NR50 452 aaKnown RBP15.45■□□□□ 0.06
SCFD2-201ENST00000388940 MOCS1Q9NZB8 636 aa15.45■□□□□ 0.06
SCFD2-201ENST00000388940 NOP53Q9NZM5 478 aaKnown RBP15.45■□□□□ 0.06
SCFD2-201ENST00000388940 HUS1O60921 280 aa15.44■□□□□ 0.06
SCFD2-201ENST00000388940 ALDH1A2O94788 518 aa15.44■□□□□ 0.06
SCFD2-201ENST00000388940 DLDP09622 509 aaKnown RBP15.44■□□□□ 0.06
SCFD2-201ENST00000388940 CSH1P0DML2 217 aa15.44■□□□□ 0.06
SCFD2-201ENST00000388940 CSH2P0DML3 217 aa15.44■□□□□ 0.06
SCFD2-201ENST00000388940 GOT1P17174 413 aa15.44■□□□□ 0.06
SCFD2-201ENST00000388940 CALRP27797 417 aaKnown RBP15.44■□□□□ 0.06
SCFD2-201ENST00000388940 SOX4Q06945 474 aaPredicted RBP15.44■□□□□ 0.06
SCFD2-201ENST00000388940 ANKRD20A2Q5SQ80 823 aa15.44■□□□□ 0.06
SCFD2-201ENST00000388940 ZNF618Q5T7W0 954 aa15.44■□□□□ 0.06
SCFD2-201ENST00000388940 ANKRD20A1Q5TYW2 823 aa15.44■□□□□ 0.06
SCFD2-201ENST00000388940 ANKRD20A3Q5VUR7 823 aa15.44■□□□□ 0.06
SCFD2-201ENST00000388940 ADGRF2Q8IZF7 708 aa15.44■□□□□ 0.06
SCFD2-201ENST00000388940 RAB3IL1Q8TBN0 382 aa15.44■□□□□ 0.06
SCFD2-201ENST00000388940 TMEM40Q8WWA1 233 aa15.44■□□□□ 0.06
SCFD2-201ENST00000388940 DNAJB3Q8WWF6 145 aa15.44■□□□□ 0.06
SCFD2-201ENST00000388940 KCTD13Q8WZ19 329 aa15.44■□□□□ 0.06
SCFD2-201ENST00000388940 OXNAD1Q96HP4 312 aaPredicted RBP15.44■□□□□ 0.06
SCFD2-201ENST00000388940 TBC1D10AQ9BXI6 508 aa15.44■□□□□ 0.06
SCFD2-201ENST00000388940 DCTN4Q9UJW0 460 aa15.44■□□□□ 0.06
SCFD2-201ENST00000388940 TRIP12Q14669 1992 aaPredicted RBP15.44■□□□□ 0.06
SCFD2-201ENST00000388940 CBX6O95503 412 aa15.44■□□□□ 0.06
SCFD2-201ENST00000388940 NEFHP12036 1026 aa15.44■□□□□ 0.06
SCFD2-201ENST00000388940 VAV1P15498 845 aa15.44■□□□□ 0.06
SCFD2-201ENST00000388940 TKTP29401 623 aaKnown RBP15.44■□□□□ 0.06
SCFD2-201ENST00000388940 LRPAP1P30533 357 aa15.44■□□□□ 0.06
SCFD2-201ENST00000388940 NOS2P35228 1153 aa15.44■□□□□ 0.06
SCFD2-201ENST00000388940 SULT1E1P49888 294 aa15.44■□□□□ 0.06
SCFD2-201ENST00000388940 MRPS5P82675 430 aaKnown RBP15.44■□□□□ 0.06
SCFD2-201ENST00000388940 CDK18Q07002 472 aa15.44■□□□□ 0.06
SCFD2-201ENST00000388940 HIC1Q14526 733 aa15.44■□□□□ 0.06
SCFD2-201ENST00000388940 FAM91A1Q658Y4 838 aa15.44■□□□□ 0.06
SCFD2-201ENST00000388940 TLDC1Q6P9B6 456 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms