RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 PI4KBQ9UBF8 816 aa6.1□□□□□ -1.43
RNU6-40P-201ENST00000384254 PCDHB2Q9Y5E7 798 aa6.1□□□□□ -1.43
RNU6-40P-201ENST00000384254 MBD3L5A6NJ08 208 aaPredicted RBP6.09□□□□□ -1.43
RNU6-40P-201ENST00000384254 HOXC11O43248 304 aaPredicted RBP6.09□□□□□ -1.43
RNU6-40P-201ENST00000384254 HNRNPRO43390 633 aaKnown RBP6.09□□□□□ -1.43
RNU6-40P-201ENST00000384254 TSPAN3O60637 253 aa6.09□□□□□ -1.43
RNU6-40P-201ENST00000384254 TJP3O95049 919 aa6.09□□□□□ -1.43
RNU6-40P-201ENST00000384254 TMIGD3P0DMS9 266 aaPredicted RBP6.09□□□□□ -1.43
RNU6-40P-201ENST00000384254 MATN1P21941 496 aa6.09□□□□□ -1.43
RNU6-40P-201ENST00000384254 MCM5P33992 734 aa6.09□□□□□ -1.43
RNU6-40P-201ENST00000384254 GRIA3P42263 894 aa6.09□□□□□ -1.43
RNU6-40P-201ENST00000384254 PCP4P48539 62 aa6.09□□□□□ -1.43
RNU6-40P-201ENST00000384254 EEFSECP57772 596 aaKnown RBP6.09□□□□□ -1.43
RNU6-40P-201ENST00000384254 VAMP2P63027 116 aa6.09□□□□□ -1.43
RNU6-40P-201ENST00000384254 RBM6P78332 1123 aaKnown RBP6.09□□□□□ -1.43
RNU6-40P-201ENST00000384254 MAPK7Q13164 816 aa6.09□□□□□ -1.43
RNU6-40P-201ENST00000384254 G3BP1Q13283 466 aaKnown RBP eCLIP6.09□□□□□ -1.43
RNU6-40P-201ENST00000384254 DLGAP5Q15398 846 aa6.09□□□□□ -1.43
RNU6-40P-201ENST00000384254 FAM153CQ494X1 144 aa6.09□□□□□ -1.43
RNU6-40P-201ENST00000384254 KIAA0895LQ68EN5 471 aa6.09□□□□□ -1.43
RNU6-40P-201ENST00000384254 WDR93Q6P2C0 686 aa6.09□□□□□ -1.43
RNU6-40P-201ENST00000384254 RSRC2Q7L4I2 434 aaKnown RBP6.09□□□□□ -1.43
RNU6-40P-201ENST00000384254 MAATS1Q7Z4T9 603 aa6.09□□□□□ -1.43
RNU6-40P-201ENST00000384254 ZNF804AQ7Z570 1209 aa6.09□□□□□ -1.43
RNU6-40P-201ENST00000384254 PEG10Q86TG7 708 aaKnown RBP6.09□□□□□ -1.43
RNU6-40P-201ENST00000384254 SFTPA1Q8IWL2 248 aa6.09□□□□□ -1.43
RNU6-40P-201ENST00000384254 USP38Q8NB14 1042 aa6.09□□□□□ -1.43
RNU6-40P-201ENST00000384254 SIMC1Q8NDZ2 872 aa6.09□□□□□ -1.43
RNU6-40P-201ENST00000384254 OR52L2PQ8NGH6 319 aa6.09□□□□□ -1.43
RNU6-40P-201ENST00000384254 MCRS1Q96EZ8 462 aa6.09□□□□□ -1.43
RNU6-40P-201ENST00000384254 PIGSQ96S52 555 aa6.09□□□□□ -1.43
RNU6-40P-201ENST00000384254 DUSP22Q9NRW4 184 aa6.09□□□□□ -1.43
RNU6-40P-201ENST00000384254 SERTAD4Q9NUC0 356 aa6.09□□□□□ -1.43
RNU6-40P-201ENST00000384254 RAB21Q9UL25 225 aa6.09□□□□□ -1.43
RNU6-40P-201ENST00000384254 TRPC5Q9UL62 973 aaPredicted RBP6.09□□□□□ -1.43
RNU6-40P-201ENST00000384254 LOC105369274A0A096LPK9 316 aa6.08□□□□□ -1.44
RNU6-40P-201ENST00000384254 LOC102723532A0A0G2JNH3 316 aa6.08□□□□□ -1.44
RNU6-40P-201ENST00000384254 GCOM1H8Y6P7 765 aaPredicted RBP6.08□□□□□ -1.44
RNU6-40P-201ENST00000384254 EYA2O00167 538 aa6.08□□□□□ -1.44
RNU6-40P-201ENST00000384254 NKX2-8O15522 239 aa6.08□□□□□ -1.44
RNU6-40P-201ENST00000384254 ADH4P08319 380 aa6.08□□□□□ -1.44
RNU6-40P-201ENST00000384254 TGM1P22735 817 aa6.08□□□□□ -1.44
RNU6-40P-201ENST00000384254 DEUP1Q05D60 604 aa6.08□□□□□ -1.44
RNU6-40P-201ENST00000384254 DNASE1L3Q13609 305 aa6.08□□□□□ -1.44
RNU6-40P-201ENST00000384254 MAPRE1Q15691 268 aaKnown RBP6.08□□□□□ -1.44
RNU6-40P-201ENST00000384254 TMEM63BQ5T3F8 832 aa6.08□□□□□ -1.44
RNU6-40P-201ENST00000384254 MAP3K21Q5TCX8 1036 aa6.08□□□□□ -1.44
RNU6-40P-201ENST00000384254 WDR78Q5VTH9 848 aa6.08□□□□□ -1.44
RNU6-40P-201ENST00000384254 ACSM6Q6P461 480 aa6.08□□□□□ -1.44
RNU6-40P-201ENST00000384254 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.08□□□□□ -1.44
RNU6-40P-201ENST00000384254 TMTC1Q8IUR5 882 aa6.08□□□□□ -1.44
RNU6-40P-201ENST00000384254 CPOQ8IVL8 374 aa6.08□□□□□ -1.44
RNU6-40P-201ENST00000384254 OR4N4Q8N0Y3 316 aa6.08□□□□□ -1.44
RNU6-40P-201ENST00000384254 ANKRD44Q8N8A2 993 aa6.08□□□□□ -1.44
RNU6-40P-201ENST00000384254 SLC9A6Q92581 669 aa6.08□□□□□ -1.44
RNU6-40P-201ENST00000384254 NPIPB3Q92617 1050 aa6.08□□□□□ -1.44
RNU6-40P-201ENST00000384254 SKA1Q96BD8 255 aa6.08□□□□□ -1.44
RNU6-40P-201ENST00000384254 CTHRC1Q96CG8 243 aa6.08□□□□□ -1.44
RNU6-40P-201ENST00000384254 TWNKQ96RR1 684 aa6.08□□□□□ -1.44
RNU6-40P-201ENST00000384254 MMRN2Q9H8L6 949 aa6.08□□□□□ -1.44
RNU6-40P-201ENST00000384254 UBN1Q9NPG3 1134 aa6.08□□□□□ -1.44
RNU6-40P-201ENST00000384254 DLL3Q9NYJ7 618 aa6.08□□□□□ -1.44
RNU6-40P-201ENST00000384254 GGA3Q9NZ52 723 aa6.08□□□□□ -1.44
RNU6-40P-201ENST00000384254 ASAP1Q9ULH1 1129 aa6.08□□□□□ -1.44
RNU6-40P-201ENST00000384254 SUFUQ9UMX1 484 aa6.08□□□□□ -1.44
RNU6-40P-201ENST00000384254 VPS4AQ9UN37 437 aa6.08□□□□□ -1.44
RNU6-40P-201ENST00000384254 ADAMTS5Q9UNA0 930 aa6.08□□□□□ -1.44
RNU6-40P-201ENST00000384254 TMEM98Q9Y2Y6 226 aa6.08□□□□□ -1.44
RNU6-40P-201ENST00000384254 CCDC187A0A096LP49 1063 aa6.07□□□□□ -1.44
RNU6-40P-201ENST00000384254 SAC3D1A6NKF1 404 aa6.07□□□□□ -1.44
RNU6-40P-201ENST00000384254 C3orf70A6NLC5 250 aaPredicted RBP6.07□□□□□ -1.44
RNU6-40P-201ENST00000384254 TTC34A8MYJ7 566 aa6.07□□□□□ -1.44
RNU6-40P-201ENST00000384254 ESRRBO95718 433 aa6.07□□□□□ -1.44
RNU6-40P-201ENST00000384254 ALDOAP04075 364 aaKnown RBP6.07□□□□□ -1.44
RNU6-40P-201ENST00000384254 IFIT1P09914 478 aaKnown RBP6.07□□□□□ -1.44
RNU6-40P-201ENST00000384254 FAM163BP0C2L3 166 aa6.07□□□□□ -1.44
RNU6-40P-201ENST00000384254 ELF1P32519 619 aa6.07□□□□□ -1.44
RNU6-40P-201ENST00000384254 DIO1P49895 249 aa6.07□□□□□ -1.44
RNU6-40P-201ENST00000384254 CCT8P50990 548 aa6.07□□□□□ -1.44
RNU6-40P-201ENST00000384254 SEC24CP53992 1094 aa6.07□□□□□ -1.44
RNU6-40P-201ENST00000384254 GEMIN4P57678 1058 aaKnown RBP6.07□□□□□ -1.44
RNU6-40P-201ENST00000384254 TLE3Q04726 772 aa6.07□□□□□ -1.44
RNU6-40P-201ENST00000384254 CHRNDQ07001 517 aa6.07□□□□□ -1.44
RNU6-40P-201ENST00000384254 FAM187BQ17R55 369 aa6.07□□□□□ -1.44
RNU6-40P-201ENST00000384254 AARS2Q5JTZ9 985 aaKnown RBP6.07□□□□□ -1.44
RNU6-40P-201ENST00000384254 PCID2Q5JVF3 399 aa6.07□□□□□ -1.44
RNU6-40P-201ENST00000384254 RETSATQ6NUM9 610 aa6.07□□□□□ -1.44
RNU6-40P-201ENST00000384254 KIRREL2Q6UWL6 708 aa6.07□□□□□ -1.44
RNU6-40P-201ENST00000384254 PRRT2Q7Z6L0 340 aaPredicted RBP6.07□□□□□ -1.44
RNU6-40P-201ENST00000384254 GLMPQ8WWB7 406 aa6.07□□□□□ -1.44
RNU6-40P-201ENST00000384254 HS6ST2Q96MM7 605 aa6.07□□□□□ -1.44
RNU6-40P-201ENST00000384254 FSD1LQ9BXM9 530 aa6.07□□□□□ -1.44
RNU6-40P-201ENST00000384254 SAP30LQ9HAJ7 183 aa6.07□□□□□ -1.44
RNU6-40P-201ENST00000384254 SLC12A4Q9UP95 1085 aa6.07□□□□□ -1.44
RNU6-40P-201ENST00000384254 A6NLC8 198 aa6.06□□□□□ -1.44
RNU6-40P-201ENST00000384254 LINC00473A8K010 186 aa6.06□□□□□ -1.44
RNU6-40P-201ENST00000384254 C1QTNF3-AMACRE9PGA6 284 aa6.06□□□□□ -1.44
RNU6-40P-201ENST00000384254 H0YIZ8 118 aa6.06□□□□□ -1.44
RNU6-40P-201ENST00000384254 STX16-NPEPL1H3BU86 382 aa6.06□□□□□ -1.44
RNU6-40P-201ENST00000384254 M0QYT0 321 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms