RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 PRKAR2AP13861 404 aaKnown RBP5.88□□□□□ -1.47
RFC1-202ENST00000381897 SLC2A5P22732 501 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 ECHS1P30084 290 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 CCNFP41002 786 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 MXI1P50539 228 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 COPAP53621 1224 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 NR1H2P55055 460 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 SPIDRQ14159 915 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 PDK3Q15120 406 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 SPRED3Q2MJR0 410 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 TMEM119Q4V9L6 283 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 ZC3H12AQ5D1E8 599 aaKnown RBP5.88□□□□□ -1.47
RFC1-202ENST00000381897 ZNF697Q5TEC3 545 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 TUSC5Q8IXB3 177 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 PDZD8Q8NEN9 1154 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 CDKL2Q92772 493 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 HLA-CQ95604 372 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 ACCSQ96QU6 501 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 MTIF3Q9H2K0 278 aaKnown RBP5.88□□□□□ -1.47
RFC1-202ENST00000381897 PRKAG3Q9UGI9 489 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 GIT1Q9Y2X7 761 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 TRAV20A0A0B4J274 112 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 PI4K2BG5E9Z4 385 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 FCHO1O14526 889 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 TBC1D4O60343 1298 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 ASLP04424 464 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 SNRPB2P08579 225 aaKnown RBP5.88□□□□□ -1.47
RFC1-202ENST00000381897 MTHFRP42898 656 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 ARL4DP49703 201 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 RTP1P59025 263 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 NLRP11P59045 1033 aaKnown RBP5.88□□□□□ -1.47
RFC1-202ENST00000381897 CACNB1Q02641 598 aaPredicted RBP5.88□□□□□ -1.47
RFC1-202ENST00000381897 MORF4L2Q15014 288 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 GPATCH4Q5T3I0 446 aaKnown RBP5.88□□□□□ -1.47
RFC1-202ENST00000381897 C6orf183Q5T699 404 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 KDELC1Q6UW63 502 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 C12orf50Q8NA57 414 aaPredicted RBP5.88□□□□□ -1.47
RFC1-202ENST00000381897 CDCA5Q96FF9 252 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 BTBD9Q96Q07 612 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 FRMD8P1Q9BZ68 369 aaPredicted RBP5.88□□□□□ -1.47
RFC1-202ENST00000381897 TRIM15Q9C019 465 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 SNX25Q9H3E2 840 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 IFT22Q9H7X7 185 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 OSGEPQ9NPF4 335 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 SOX13Q9UN79 622 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 ANKRD6Q9Y2G4 727 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 CYP2D7A0A087X1C5 515 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 GOLGA8IPA6NC78 632 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 CFAP99D6REC4 459 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 E9PMD0 336 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 MAGEB2O15479 319 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 PSTPIP1O43586 416 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 GPC4O75487 556 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 PPM1BO75688 479 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 MSX2P35548 267 aaPredicted RBP5.88□□□□□ -1.47
RFC1-202ENST00000381897 CSNK2BP67870 215 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 TUBA1BP68363 451 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 SCN1BQ07699 218 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 GPS1Q13098 491 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 EPHA7Q15375 998 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 ATXN7L2Q5T6C5 722 aaPredicted RBP5.88□□□□□ -1.47
RFC1-202ENST00000381897 ZFP1Q6P2D0 407 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 LAYNQ6UX15 382 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 TRIM72Q6ZMU5 477 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 TUBA1AQ71U36 451 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 PODNQ7Z5L7 613 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 KRT77Q7Z794 578 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 CLNKQ7Z7G1 428 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 SETD3Q86TU7 594 aaPredicted RBP5.88□□□□□ -1.47
RFC1-202ENST00000381897 DNAJC10Q8IXB1 793 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 OR8H3Q8N146 312 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 ZCCHC9Q8N567 271 aaKnown RBP5.88□□□□□ -1.47
RFC1-202ENST00000381897 NAXEQ8NCW5 288 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 TRPM4Q8TD43 1214 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 ZNF558Q96NG5 402 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 SLC13A1Q9BZW2 595 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 TMED5Q9Y3A6 229 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 PCDHA3Q9Y5H8 950 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 FLT1P17948 1338 aa5.88□□□□□ -1.47
RFC1-202ENST00000381897 AFDNP55196 1824 aaKnown RBP5.88□□□□□ -1.47
RFC1-202ENST00000381897 A6NCN8 305 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 K7ENM7 598 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 MATN2O00339 956 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 PIP5K1BO14986 540 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 WDR46O15213 610 aaKnown RBP5.87□□□□□ -1.47
RFC1-202ENST00000381897 TLR2O60603 784 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 TOM1L1O75674 476 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 CAMTA2O94983 1202 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 MYL2P10916 166 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 S100A1P23297 94 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 EIF2DP41214 584 aaKnown RBP5.87□□□□□ -1.47
RFC1-202ENST00000381897 ALDH18A1P54886 795 aaKnown RBP5.87□□□□□ -1.47
RFC1-202ENST00000381897 GALNT1Q10472 559 aaPredicted RBP5.87□□□□□ -1.47
RFC1-202ENST00000381897 PMPCAQ10713 525 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 RUNDC3AQ59EK9 446 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 Q5PR19 223 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 CES5AQ6NT32 575 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 IRF2BP2Q7Z5L9 587 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 GPR141Q7Z602 305 aa5.87□□□□□ -1.47
RFC1-202ENST00000381897 RCOR2Q8IZ40 523 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms