RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 TCEAL3Q969E4 200 aa13.6□□□□□ -0.23
RPAIN-202ENST00000381208 ARID3AQ99856 593 aa13.6□□□□□ -0.23
RPAIN-202ENST00000381208 SMOC1Q9H4F8 434 aa13.6□□□□□ -0.23
RPAIN-202ENST00000381208 CNGB3Q9NQW8 809 aa13.6□□□□□ -0.23
RPAIN-202ENST00000381208 HBS1LQ9Y450 684 aaKnown RBP13.6□□□□□ -0.23
RPAIN-202ENST00000381208 THADAQ6YHU6 1953 aa13.59□□□□□ -0.23
RPAIN-202ENST00000381208 A0A1W2PQF6 199 aa13.59□□□□□ -0.23
RPAIN-202ENST00000381208 SLC12A8A0AV02 714 aa13.59□□□□□ -0.23
RPAIN-202ENST00000381208 ANTXRLA6NF34 631 aa13.59□□□□□ -0.23
RPAIN-202ENST00000381208 C4orf47A7E2U8 309 aa13.59□□□□□ -0.23
RPAIN-202ENST00000381208 PRRT4C9JH25 899 aa13.59□□□□□ -0.23
RPAIN-202ENST00000381208 TIMM44O43615 452 aa13.59□□□□□ -0.23
RPAIN-202ENST00000381208 KCNK5O95279 499 aa13.59□□□□□ -0.23
RPAIN-202ENST00000381208 LATS1O95835 1130 aa13.59□□□□□ -0.23
RPAIN-202ENST00000381208 GNA14O95837 355 aa13.59□□□□□ -0.23
RPAIN-202ENST00000381208 KLKB1P03952 638 aa13.59□□□□□ -0.23
RPAIN-202ENST00000381208 GABRG2P18507 467 aa13.59□□□□□ -0.23
RPAIN-202ENST00000381208 FMO5P49326 533 aa13.59□□□□□ -0.23
RPAIN-202ENST00000381208 PMS1P54277 932 aaKnown RBP13.59□□□□□ -0.23
RPAIN-202ENST00000381208 PDE4CQ08493 712 aa13.59□□□□□ -0.23
RPAIN-202ENST00000381208 FYB2Q5VWT5 728 aa13.59□□□□□ -0.23
RPAIN-202ENST00000381208 METTL3Q86U44 580 aaKnown RBP13.59□□□□□ -0.23
RPAIN-202ENST00000381208 SIX6OS1Q8N1H7 587 aa13.59□□□□□ -0.23
RPAIN-202ENST00000381208 NT5C1BQ96P26 610 aa13.59□□□□□ -0.23
RPAIN-202ENST00000381208 IRX2Q9BZI1 471 aaPredicted RBP13.59□□□□□ -0.23
RPAIN-202ENST00000381208 ULBP1Q9BZM6 244 aa13.59□□□□□ -0.23
RPAIN-202ENST00000381208 ABCC13Q9NSE7 274 aa13.59□□□□□ -0.23
RPAIN-202ENST00000381208 CALCOCO1Q9P1Z2 691 aa13.59□□□□□ -0.23
RPAIN-202ENST00000381208 ANGPTL2Q9UKU9 493 aa13.59□□□□□ -0.23
RPAIN-202ENST00000381208 AGO1Q9UL18 857 aaKnown RBP13.59□□□□□ -0.23
RPAIN-202ENST00000381208 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.58□□□□□ -0.23
RPAIN-202ENST00000381208 O00370 1275 aa13.58□□□□□ -0.23
RPAIN-202ENST00000381208 TRIM24O15164 1050 aa13.58□□□□□ -0.23
RPAIN-202ENST00000381208 CSRP1P21291 193 aaKnown RBP13.58□□□□□ -0.23
RPAIN-202ENST00000381208 PMLP29590 882 aa13.58□□□□□ -0.23
RPAIN-202ENST00000381208 MFAP3P55082 362 aa13.58□□□□□ -0.23
RPAIN-202ENST00000381208 SHC2P98077 582 aa13.58□□□□□ -0.23
RPAIN-202ENST00000381208 RPL6Q02878 288 aaKnown RBP13.58□□□□□ -0.23
RPAIN-202ENST00000381208 TRIP4Q15650 581 aaPredicted RBP13.58□□□□□ -0.23
RPAIN-202ENST00000381208 DUOXA1Q1HG43 343 aa13.58□□□□□ -0.23
RPAIN-202ENST00000381208 CCDC40Q4G0X9 1142 aa13.58□□□□□ -0.23
RPAIN-202ENST00000381208 TRIM61Q5EBN2 209 aa13.58□□□□□ -0.23
RPAIN-202ENST00000381208 PEAR1Q5VY43 1037 aaPredicted RBP13.58□□□□□ -0.23
RPAIN-202ENST00000381208 SLC23A3Q6PIS1 610 aa13.58□□□□□ -0.23
RPAIN-202ENST00000381208 LCLAT1Q6UWP7 414 aa13.58□□□□□ -0.23
RPAIN-202ENST00000381208 TOGARAM2Q6ZUX3 1019 aa13.58□□□□□ -0.23
RPAIN-202ENST00000381208 ANKS1BQ7Z6G8 1248 aa13.58□□□□□ -0.23
RPAIN-202ENST00000381208 FAM217AQ8IXS0 508 aa13.58□□□□□ -0.23
RPAIN-202ENST00000381208 TMEFF1Q8IYR6 380 aa13.58□□□□□ -0.23
RPAIN-202ENST00000381208 ZNF557Q8N988 423 aaPredicted RBP13.58□□□□□ -0.23
RPAIN-202ENST00000381208 FOXJ1Q92949 421 aa13.58□□□□□ -0.23
RPAIN-202ENST00000381208 CNTNAP3BQ96NU0 1288 aa13.58□□□□□ -0.23
RPAIN-202ENST00000381208 CNTNAP3Q9BZ76 1288 aa13.58□□□□□ -0.23
RPAIN-202ENST00000381208 ZDHHC4Q9NPG8 344 aa13.58□□□□□ -0.23
RPAIN-202ENST00000381208 MBD1Q9UIS9 605 aaPredicted RBP13.58□□□□□ -0.23
RPAIN-202ENST00000381208 HCN2Q9UL51 889 aa13.58□□□□□ -0.23
RPAIN-202ENST00000381208 NUP205Q92621 2012 aa13.58□□□□□ -0.24
RPAIN-202ENST00000381208 TRIM49BA6NDI0 452 aa13.58□□□□□ -0.24
RPAIN-202ENST00000381208 FGFR1OPO95684 399 aaKnown RBP13.58□□□□□ -0.24
RPAIN-202ENST00000381208 WASP42768 502 aa13.58□□□□□ -0.24
RPAIN-202ENST00000381208 PTGER3P43115 390 aa13.58□□□□□ -0.24
RPAIN-202ENST00000381208 IRX4P78413 519 aa13.58□□□□□ -0.24
RPAIN-202ENST00000381208 ADIGQ0VDE8 80 aa13.58□□□□□ -0.24
RPAIN-202ENST00000381208 CNGA2Q16280 664 aa13.58□□□□□ -0.24
RPAIN-202ENST00000381208 MPPE1Q53F39 396 aa13.58□□□□□ -0.24
RPAIN-202ENST00000381208 N4BP2L1Q5TBK1 243 aaPredicted RBP13.58□□□□□ -0.24
RPAIN-202ENST00000381208 BSPRYQ5W0U4 402 aa13.58□□□□□ -0.24
RPAIN-202ENST00000381208 TMEM270Q6UE05 265 aa13.58□□□□□ -0.24
RPAIN-202ENST00000381208 DENND1CQ8IV53 801 aa13.58□□□□□ -0.24
RPAIN-202ENST00000381208 UBR7Q8N806 425 aa13.58□□□□□ -0.24
RPAIN-202ENST00000381208 IRGQQ8WZA9 623 aa13.58□□□□□ -0.24
RPAIN-202ENST00000381208 GOLGA1Q92805 767 aa13.58□□□□□ -0.24
RPAIN-202ENST00000381208 HSFY1Q96LI6 401 aa13.58□□□□□ -0.24
RPAIN-202ENST00000381208 CD248Q9HCU0 757 aa13.58□□□□□ -0.24
RPAIN-202ENST00000381208 PLK2Q9NYY3 685 aa13.58□□□□□ -0.24
RPAIN-202ENST00000381208 THAP10Q9P2Z0 257 aaPredicted RBP13.58□□□□□ -0.24
RPAIN-202ENST00000381208 SUSD2Q9UGT4 822 aa13.58□□□□□ -0.24
RPAIN-202ENST00000381208 PILRBQ9UKJ0 227 aa13.58□□□□□ -0.24
RPAIN-202ENST00000381208 SLC6A14Q9UN76 642 aa13.58□□□□□ -0.24
RPAIN-202ENST00000381208 PLXND1Q9Y4D7 1925 aa13.57□□□□□ -0.24
RPAIN-202ENST00000381208 IGHV1OR15-9A0A0B4J2B8 117 aa13.57□□□□□ -0.24
RPAIN-202ENST00000381208 SYNCRIPO60506 623 aaKnown RBP13.57□□□□□ -0.24
RPAIN-202ENST00000381208 NDUFS2O75306 463 aa13.57□□□□□ -0.24
RPAIN-202ENST00000381208 FBXO21O94952 628 aa13.57□□□□□ -0.24
RPAIN-202ENST00000381208 HMBSP08397 361 aa13.57□□□□□ -0.24
RPAIN-202ENST00000381208 CEACAM1P13688 526 aa13.57□□□□□ -0.24
RPAIN-202ENST00000381208 NDUFV2P19404 249 aa13.57□□□□□ -0.24
RPAIN-202ENST00000381208 NOVA1P51513 510 aaKnown RBP13.57□□□□□ -0.24
RPAIN-202ENST00000381208 ATXN3P54252 364 aaPredicted RBP13.57□□□□□ -0.24
RPAIN-202ENST00000381208 GCNT1Q02742 428 aa13.57□□□□□ -0.24
RPAIN-202ENST00000381208 ARID5AQ03989 594 aa13.57□□□□□ -0.24
RPAIN-202ENST00000381208 ZNF33AQ06730 810 aa13.57□□□□□ -0.24
RPAIN-202ENST00000381208 ENPP2Q13822 863 aa13.57□□□□□ -0.24
RPAIN-202ENST00000381208 PKDCCQ504Y2 493 aa13.57□□□□□ -0.24
RPAIN-202ENST00000381208 SYCP2LQ5T4T6 812 aa13.57□□□□□ -0.24
RPAIN-202ENST00000381208 SMYD5Q6GMV2 418 aa13.57□□□□□ -0.24
RPAIN-202ENST00000381208 TTI2Q6NXR4 508 aa13.57□□□□□ -0.24
RPAIN-202ENST00000381208 FMNL3Q8IVF7 1028 aa13.57□□□□□ -0.24
RPAIN-202ENST00000381208 PPM1KQ8N3J5 372 aa13.57□□□□□ -0.24
RPAIN-202ENST00000381208 WFIKKN2Q8TEU8 576 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms