RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 BSPRYQ5W0U4 402 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 KLHDC10Q6PID8 442 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 BHLHA9Q7RTU4 235 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 RALGPS2Q86X27 583 aaPredicted RBP9.67□□□□□ -0.86
HMGN1-202ENST00000380747 DCLK2Q8N568 766 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 RNF139Q8WU17 664 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 IRGQQ8WZA9 623 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 EDEM1Q92611 657 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 GOLGA1Q92805 767 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 MSANTD3Q96H12 275 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 ERGIC2Q96RQ1 377 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 CDK5RAP1Q96SZ6 601 aaKnown RBP9.67□□□□□ -0.86
HMGN1-202ENST00000380747 NELL2Q99435 816 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 KLF16Q9BXK1 252 aaPredicted RBP9.67□□□□□ -0.86
HMGN1-202ENST00000380747 ECT2Q9H8V3 914 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 STRIP2Q9ULQ0 834 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 CEP83Q9Y592 693 aa9.67□□□□□ -0.86
HMGN1-202ENST00000380747 SLC12A8A0AV02 714 aa9.66□□□□□ -0.86
HMGN1-202ENST00000380747 FAM170AA1A519 330 aa9.66□□□□□ -0.86
HMGN1-202ENST00000380747 OTOL1A6NHN0 477 aaPredicted RBP9.66□□□□□ -0.86
HMGN1-202ENST00000380747 SHISA7A6NL88 538 aa9.66□□□□□ -0.86
HMGN1-202ENST00000380747 E5RJQ4 531 aa9.66□□□□□ -0.86
HMGN1-202ENST00000380747 NCAM2O15394 837 aa9.66□□□□□ -0.86
HMGN1-202ENST00000380747 CYP11B1P15538 503 aa9.66□□□□□ -0.86
HMGN1-202ENST00000380747 SOX5P35711 763 aa9.66□□□□□ -0.86
HMGN1-202ENST00000380747 MLLT6P55198 1093 aaPredicted RBP9.66□□□□□ -0.86
HMGN1-202ENST00000380747 AMPD2Q01433 879 aa9.66□□□□□ -0.86
HMGN1-202ENST00000380747 LMNB2Q03252 620 aa9.66□□□□□ -0.86
HMGN1-202ENST00000380747 PDCLQ13371 301 aa9.66□□□□□ -0.86
HMGN1-202ENST00000380747 PON2Q15165 354 aa9.66□□□□□ -0.86
HMGN1-202ENST00000380747 TXNDC11Q6PKC3 985 aa9.66□□□□□ -0.86
HMGN1-202ENST00000380747 CACNA2D4Q7Z3S7 1137 aa9.66□□□□□ -0.86
HMGN1-202ENST00000380747 BBS7Q8IWZ6 715 aa9.66□□□□□ -0.86
HMGN1-202ENST00000380747 SCML4Q8N228 414 aa9.66□□□□□ -0.86
HMGN1-202ENST00000380747 WDTC1Q8N5D0 677 aa9.66□□□□□ -0.86
HMGN1-202ENST00000380747 ZBTB44Q8NCP5 570 aa9.66□□□□□ -0.86
HMGN1-202ENST00000380747 C1orf131Q8NDD1 294 aaKnown RBP9.66□□□□□ -0.86
HMGN1-202ENST00000380747 CLEC4CQ8WTT0 213 aa9.66□□□□□ -0.86
HMGN1-202ENST00000380747 STK32AQ8WU08 396 aa9.66□□□□□ -0.86
HMGN1-202ENST00000380747 NELL1Q92832 810 aa9.66□□□□□ -0.86
HMGN1-202ENST00000380747 WBP2Q969T9 261 aa9.66□□□□□ -0.86
HMGN1-202ENST00000380747 NAP1L5Q96NT1 182 aaPredicted RBP9.66□□□□□ -0.86
HMGN1-202ENST00000380747 NOX5Q96PH1 765 aa9.66□□□□□ -0.86
HMGN1-202ENST00000380747 TSPY26PQ9H489 355 aa9.66□□□□□ -0.86
HMGN1-202ENST00000380747 SYNCQ9H7C4 482 aa9.66□□□□□ -0.86
HMGN1-202ENST00000380747 OLA1Q9NTK5 396 aaKnown RBP9.66□□□□□ -0.86
HMGN1-202ENST00000380747 MARCH2Q9P0N8 246 aa9.66□□□□□ -0.86
HMGN1-202ENST00000380747 MAP10Q9P2G4 905 aa9.66□□□□□ -0.86
HMGN1-202ENST00000380747 TBC1D14Q9P2M4 693 aa9.66□□□□□ -0.86
HMGN1-202ENST00000380747 SFMBT1Q9UHJ3 866 aa9.66□□□□□ -0.86
HMGN1-202ENST00000380747 CYTH4Q9UIA0 394 aa9.66□□□□□ -0.86
HMGN1-202ENST00000380747 DAAM1Q9Y4D1 1078 aa9.66□□□□□ -0.86
HMGN1-202ENST00000380747 MYO16Q9Y6X6 1858 aa9.66□□□□□ -0.86
HMGN1-202ENST00000380747 ATRXP46100 2492 aa9.65□□□□□ -0.86
HMGN1-202ENST00000380747 MYH10P35580 1976 aa9.65□□□□□ -0.86
HMGN1-202ENST00000380747 DENND4CQ5VZ89 1909 aa9.65□□□□□ -0.86
HMGN1-202ENST00000380747 TICRRQ7Z2Z1 1910 aa9.65□□□□□ -0.86
HMGN1-202ENST00000380747 ANAPC1Q9H1A4 1944 aa9.65□□□□□ -0.86
HMGN1-202ENST00000380747 SART1O43290 800 aaKnown RBP9.65□□□□□ -0.86
HMGN1-202ENST00000380747 STC2O76061 302 aa9.65□□□□□ -0.86
HMGN1-202ENST00000380747 F12P00748 615 aaPredicted RBP9.65□□□□□ -0.86
HMGN1-202ENST00000380747 LTFP02788 710 aa9.65□□□□□ -0.86
HMGN1-202ENST00000380747 CYP17A1P05093 508 aa9.65□□□□□ -0.86
HMGN1-202ENST00000380747 GJA4P35212 333 aa9.65□□□□□ -0.86
HMGN1-202ENST00000380747 RPL34P49207 117 aaKnown RBP9.65□□□□□ -0.86
HMGN1-202ENST00000380747 MMP16P51512 607 aa9.65□□□□□ -0.86
HMGN1-202ENST00000380747 ATXN1P54253 815 aaKnown RBP9.65□□□□□ -0.86
HMGN1-202ENST00000380747 JAM2P57087 298 aa9.65□□□□□ -0.86
HMGN1-202ENST00000380747 COG7P83436 770 aa9.65□□□□□ -0.86
HMGN1-202ENST00000380747 FANCCQ00597 558 aa9.65□□□□□ -0.86
HMGN1-202ENST00000380747 ARID5AQ03989 594 aa9.65□□□□□ -0.86
HMGN1-202ENST00000380747 DHCR24Q15392 516 aa9.65□□□□□ -0.86
HMGN1-202ENST00000380747 C1orf228Q6PIY5 440 aa9.65□□□□□ -0.86
HMGN1-202ENST00000380747 HTR3DQ70Z44 454 aa9.65□□□□□ -0.86
HMGN1-202ENST00000380747 TMEM110Q86TL2 294 aa9.65□□□□□ -0.86
HMGN1-202ENST00000380747 NOP9Q86U38 636 aaKnown RBP9.65□□□□□ -0.86
HMGN1-202ENST00000380747 FMNL3Q8IVF7 1028 aa9.65□□□□□ -0.86
HMGN1-202ENST00000380747 ZNF276Q8N554 614 aa9.65□□□□□ -0.86
HMGN1-202ENST00000380747 KIAA1958Q8N8K9 716 aa9.65□□□□□ -0.86
HMGN1-202ENST00000380747 TMEM35BQ8NCS4 154 aa9.65□□□□□ -0.86
HMGN1-202ENST00000380747 IPO4Q8TEX9 1081 aaKnown RBP9.65□□□□□ -0.86
HMGN1-202ENST00000380747 SLC20A1Q8WUM9 679 aa9.65□□□□□ -0.86
HMGN1-202ENST00000380747 FAM149B1Q96BN6 582 aa9.65□□□□□ -0.86
HMGN1-202ENST00000380747 PPP1R13BQ96KQ4 1090 aa9.65□□□□□ -0.86
HMGN1-202ENST00000380747 CPXM1Q96SM3 734 aa9.65□□□□□ -0.86
HMGN1-202ENST00000380747 LHX5Q9H2C1 402 aa9.65□□□□□ -0.86
HMGN1-202ENST00000380747 EPC1Q9H2F5 836 aa9.65□□□□□ -0.86
HMGN1-202ENST00000380747 LMAN1LQ9HAT1 526 aa9.65□□□□□ -0.86
HMGN1-202ENST00000380747 ABCC13Q9NSE7 274 aa9.65□□□□□ -0.86
HMGN1-202ENST00000380747 TJP2Q9UDY2 1190 aa9.65□□□□□ -0.86
HMGN1-202ENST00000380747 ZZEF1O43149 2961 aa9.65□□□□□ -0.87
HMGN1-202ENST00000380747 ASPMQ8IZT6 3477 aa9.65□□□□□ -0.87
HMGN1-202ENST00000380747 COL4A2P08572 1712 aa9.65□□□□□ -0.87
HMGN1-202ENST00000380747 ZNF638Q14966 1978 aaKnown RBP9.64□□□□□ -0.87
HMGN1-202ENST00000380747 FAM208BQ5VWN6 2430 aa9.64□□□□□ -0.87
HMGN1-202ENST00000380747 A0A1B0GTH6 734 aa9.64□□□□□ -0.87
HMGN1-202ENST00000380747 CAPN9O14815 690 aa9.64□□□□□ -0.87
HMGN1-202ENST00000380747 PAPSS1O43252 624 aaPredicted RBP9.64□□□□□ -0.87
HMGN1-202ENST00000380747 MSI1O43347 362 aaKnown RBP9.64□□□□□ -0.87
HMGN1-202ENST00000380747 LAMTOR5O43504 91 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms