RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 IRAK2O43187 625 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 IGLV3-27P01718 113 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 KLKB1P03952 638 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 TCF3P15923 654 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 GBP1P32455 592 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 ATXN1P54253 815 aaKnown RBP13.18□□□□□ -0.3
SMN1-202ENST00000380707 TBX4P57082 545 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 KRT83P78385 493 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 ZNF252P-AS1Q0IIN9 211 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 USP4Q13107 963 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 NNTQ13423 1086 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 CDO1Q16878 200 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 ZC3H12AQ5D1E8 599 aaKnown RBP13.18□□□□□ -0.3
SMN1-202ENST00000380707 DDX42Q86XP3 938 aaKnown RBP eCLIP13.18□□□□□ -0.3
SMN1-202ENST00000380707 MFSD6LQ8IWD5 586 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 ZNF564Q8TBZ8 553 aaPredicted RBP13.18□□□□□ -0.3
SMN1-202ENST00000380707 ATRIPQ8WXE1 791 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 CENPIQ92674 756 aaPredicted RBP13.18□□□□□ -0.3
SMN1-202ENST00000380707 E2F7Q96AV8 911 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 PGAP3Q96FM1 320 aaPredicted RBP13.18□□□□□ -0.3
SMN1-202ENST00000380707 SLC39A13Q96H72 371 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 FCRL2Q96LA5 508 aaPredicted RBP13.18□□□□□ -0.3
SMN1-202ENST00000380707 LACRTQ9GZZ8 138 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 LUC7LQ9NQ29 371 aaKnown RBP13.18□□□□□ -0.3
SMN1-202ENST00000380707 UVRAGQ9P2Y5 699 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 ADGRG1Q9Y653 693 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 CCP110O43303 1012 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 NRDCO43847 1150 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 ENDOD1O94919 500 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 PSMC3P17980 439 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 KPNA1P52294 538 aaPredicted RBP13.18□□□□□ -0.3
SMN1-202ENST00000380707 VAV2P52735 878 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 DEUP1Q05D60 604 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 RING1Q06587 406 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 FCHO2Q0JRZ9 810 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 GRM2Q14416 872 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 TJAP1Q5JTD0 557 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 HTR3DQ70Z44 454 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 SLC44A3Q8N4M1 653 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 BPIFB1Q8TDL5 484 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 FNIP1Q8TF40 1166 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 FAM172AQ8WUF8 416 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 RFFLQ8WZ73 363 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 PLD4Q96BZ4 506 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 NECAB3Q96P71 396 aaPredicted RBP13.18□□□□□ -0.3
SMN1-202ENST00000380707 CNPY3Q9BT09 278 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 IGSF9Q9P2J2 1179 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 ANAPC7Q9UJX3 599 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 SH3BP1Q9Y3L3 701 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 DUSP10Q9Y6W6 482 aa13.18□□□□□ -0.3
SMN1-202ENST00000380707 E2F8A0AVK6 867 aa13.17□□□□□ -0.3
SMN1-202ENST00000380707 F9P00740 461 aa13.17□□□□□ -0.3
SMN1-202ENST00000380707 PSMA2P25787 234 aa13.17□□□□□ -0.3
SMN1-202ENST00000380707 CORO1AP31146 461 aaKnown RBP13.17□□□□□ -0.3
SMN1-202ENST00000380707 CXCR3P49682 368 aa13.17□□□□□ -0.3
SMN1-202ENST00000380707 HDAC4P56524 1084 aa13.17□□□□□ -0.3
SMN1-202ENST00000380707 TCEAL1Q15170 157 aa13.17□□□□□ -0.3
SMN1-202ENST00000380707 Q6ZNB5 142 aa13.17□□□□□ -0.3
SMN1-202ENST00000380707 STRADAQ7RTN6 431 aa13.17□□□□□ -0.3
SMN1-202ENST00000380707 KIAA1328Q86T90 577 aa13.17□□□□□ -0.3
SMN1-202ENST00000380707 DENND1CQ8IV53 801 aa13.17□□□□□ -0.3
SMN1-202ENST00000380707 RHOT2Q8IXI1 618 aa13.17□□□□□ -0.3
SMN1-202ENST00000380707 ARFGAP1Q8N6T3 406 aa13.17□□□□□ -0.3
SMN1-202ENST00000380707 NXPE3Q969Y0 559 aa13.17□□□□□ -0.3
SMN1-202ENST00000380707 ASIC4Q96FT7 647 aa13.17□□□□□ -0.3
SMN1-202ENST00000380707 ZFYVE19Q96K21 471 aa13.17□□□□□ -0.3
SMN1-202ENST00000380707 LINC00597Q9H2U6 94 aa13.17□□□□□ -0.3
SMN1-202ENST00000380707 CD320Q9NPF0 282 aa13.17□□□□□ -0.3
SMN1-202ENST00000380707 ANLNQ9NQW6 1124 aa13.17□□□□□ -0.3
SMN1-202ENST00000380707 SALL4Q9UJQ4 1053 aa13.17□□□□□ -0.3
SMN1-202ENST00000380707 AGO1Q9UL18 857 aaKnown RBP13.17□□□□□ -0.3
SMN1-202ENST00000380707 MYO10Q9HD67 2058 aa13.16□□□□□ -0.3
SMN1-202ENST00000380707 KCNU1A8MYU2 1149 aa13.16□□□□□ -0.3
SMN1-202ENST00000380707 I6L893 689 aaPredicted RBP13.16□□□□□ -0.3
SMN1-202ENST00000380707 MYO1FO00160 1098 aa13.16□□□□□ -0.3
SMN1-202ENST00000380707 PJA2O43164 708 aa13.16□□□□□ -0.3
SMN1-202ENST00000380707 MTA2O94776 668 aa13.16□□□□□ -0.3
SMN1-202ENST00000380707 CCR1P32246 355 aa13.16□□□□□ -0.3
SMN1-202ENST00000380707 RDXP35241 583 aaKnown RBP13.16□□□□□ -0.3
SMN1-202ENST00000380707 HARS2P49590 506 aaKnown RBP13.16□□□□□ -0.3
SMN1-202ENST00000380707 DAB2IPQ5VWQ8 1189 aa13.16□□□□□ -0.3
SMN1-202ENST00000380707 NUGGCQ68CJ6 796 aa13.16□□□□□ -0.3
SMN1-202ENST00000380707 TRIM68Q6AZZ1 485 aa13.16□□□□□ -0.3
SMN1-202ENST00000380707 FAM131BQ86XD5 332 aa13.16□□□□□ -0.3
SMN1-202ENST00000380707 UNC45BQ8IWX7 931 aa13.16□□□□□ -0.3
SMN1-202ENST00000380707 BBS7Q8IWZ6 715 aa13.16□□□□□ -0.3
SMN1-202ENST00000380707 DEPDC1BQ8WUY9 529 aa13.16□□□□□ -0.3
SMN1-202ENST00000380707 OSCP1Q8WVF1 389 aa13.16□□□□□ -0.3
SMN1-202ENST00000380707 RNF34Q969K3 372 aa13.16□□□□□ -0.3
SMN1-202ENST00000380707 FAM83CQ9BQN1 747 aa13.16□□□□□ -0.3
SMN1-202ENST00000380707 TRMT61BQ9BVS5 477 aaKnown RBP13.16□□□□□ -0.3
SMN1-202ENST00000380707 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.16□□□□□ -0.3
SMN1-202ENST00000380707 THG1LQ9NWX6 298 aaKnown RBP13.16□□□□□ -0.3
SMN1-202ENST00000380707 XPO7Q9UIA9 1087 aaKnown RBP13.16□□□□□ -0.3
SMN1-202ENST00000380707 LSM7Q9UK45 103 aaKnown RBP13.16□□□□□ -0.3
SMN1-202ENST00000380707 WNT6Q9Y6F9 365 aa13.16□□□□□ -0.3
SMN1-202ENST00000380707 TTC28Q96AY4 2481 aa13.16□□□□□ -0.3
SMN1-202ENST00000380707 A0A0A6YYK5 440 aaPredicted RBP13.15□□□□□ -0.3
SMN1-202ENST00000380707 MOCS2O96007 188 aaPredicted RBP13.15□□□□□ -0.3
SMN1-202ENST00000380707 SLC2A3P11169 496 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms