RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 WNT8BQ93098 351 aa13.06□□□□□ -0.32
VPS16-202ENST00000380445 SLC2A13Q96QE2 648 aa13.06□□□□□ -0.32
VPS16-202ENST00000380445 SLC9A7Q96T83 725 aa13.06□□□□□ -0.32
VPS16-202ENST00000380445 NMRK2Q9NPI5 230 aa13.06□□□□□ -0.32
VPS16-202ENST00000380445 CNGB3Q9NQW8 809 aa13.06□□□□□ -0.32
VPS16-202ENST00000380445 CDH9Q9ULB4 789 aa13.06□□□□□ -0.32
VPS16-202ENST00000380445 PTCH2Q9Y6C5 1203 aa13.06□□□□□ -0.32
VPS16-202ENST00000380445 SF3B1O75533 1304 aaKnown RBP eCLIP13.06□□□□□ -0.326e-6■■■■■ 122.4
VPS16-202ENST00000380445 A0A1W2PPM1 405 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 M0QYT0 321 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 CAPN9O14815 690 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 TM9SF1O15321 606 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 MAP3K6O95382 1288 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 GOT1P17174 413 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 PAX3P23760 479 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 PCSK1P29120 753 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 RPA3P35244 121 aaPredicted RBP13.05□□□□□ -0.32
VPS16-202ENST00000380445 MAP3K7CLP57077 242 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 DEUP1Q05D60 604 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 SLC10A2Q12908 348 aaPredicted RBP13.05□□□□□ -0.32
VPS16-202ENST00000380445 EFTUD2Q15029 972 aaKnown RBP eCLIP13.05□□□□□ -0.321e-6■■■■□ 20.2
VPS16-202ENST00000380445 PDK4Q16654 411 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 LGSNQ5TDP6 509 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 BNIPLQ7Z465 357 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 SLC44A1Q8WWI5 657 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 KIF9Q9HAQ2 790 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 XAB2Q9HCS7 855 aaKnown RBP13.05□□□□□ -0.32
VPS16-202ENST00000380445 KRT82Q9NSB4 513 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 DTLQ9NZJ0 730 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 KLHL14Q9P2G3 628 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 ZC3H7BQ9UGR2 993 aaKnown RBP13.05□□□□□ -0.32
VPS16-202ENST00000380445 USP3Q9Y6I4 520 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 ARL5CA6NH57 179 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 SEPT4O43236 478 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 CA12O43570 354 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 BEST1O76090 585 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 PGK1P00558 417 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 CHRNA1P02708 482 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 MT-ND3P03897 115 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 CTSHP09668 335 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 AMPD1P23109 780 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 FDFT1P37268 417 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 CLCNKBP51801 687 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 CDK16Q00536 496 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 CRYMQ14894 314 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 MRPL10Q7Z7H8 261 aaKnown RBP13.05□□□□□ -0.32
VPS16-202ENST00000380445 IGDCC3Q8IVU1 814 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 LRRC8CQ8TDW0 803 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 HTR3CQ8WXA8 447 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 RRN3Q9NYV6 651 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 SCN10AQ9Y5Y9 1956 aa13.05□□□□□ -0.32
VPS16-202ENST00000380445 AP1G2O75843 785 aa13.04□□□□□ -0.32
VPS16-202ENST00000380445 DGKIO75912 1065 aa13.04□□□□□ -0.32
VPS16-202ENST00000380445 PTK7Q13308 1070 aa13.04□□□□□ -0.32
VPS16-202ENST00000380445 MTM1Q13496 603 aa13.04□□□□□ -0.32
VPS16-202ENST00000380445 ZKSCAN8Q15776 578 aaPredicted RBP13.04□□□□□ -0.32
VPS16-202ENST00000380445 KBTBD12Q3ZCT8 623 aa13.04□□□□□ -0.32
VPS16-202ENST00000380445 PDZD4Q76G19 769 aaPredicted RBP13.04□□□□□ -0.32
VPS16-202ENST00000380445 RNF139Q8WU17 664 aa13.04□□□□□ -0.32
VPS16-202ENST00000380445 APBB2Q92870 758 aa13.04□□□□□ -0.32
VPS16-202ENST00000380445 OLFM3Q96PB7 478 aa13.04□□□□□ -0.32
VPS16-202ENST00000380445 CRTAC1Q9NQ79 661 aa13.04□□□□□ -0.32
VPS16-202ENST00000380445 STARD13Q9Y3M8 1113 aa13.04□□□□□ -0.32
VPS16-202ENST00000380445 MEIS3P2A8K0S8 358 aa13.04□□□□□ -0.32
VPS16-202ENST00000380445 C9IYK1 514 aa13.04□□□□□ -0.32
VPS16-202ENST00000380445 ZNF623O75123 536 aa13.04□□□□□ -0.32
VPS16-202ENST00000380445 AVILO75366 819 aa13.04□□□□□ -0.32
VPS16-202ENST00000380445 YY1P25490 414 aa13.04□□□□□ -0.32
VPS16-202ENST00000380445 MGAT3Q09327 533 aa13.04□□□□□ -0.32
VPS16-202ENST00000380445 SF3A3Q12874 501 aaKnown RBP eCLIP13.04□□□□□ -0.324e-11■■■■■ 39.5
VPS16-202ENST00000380445 SEMA5AQ13591 1074 aa13.04□□□□□ -0.32
VPS16-202ENST00000380445 SPRED3Q2MJR0 410 aa13.04□□□□□ -0.32
VPS16-202ENST00000380445 FAM35AQ86V20 835 aa13.04□□□□□ -0.32
VPS16-202ENST00000380445 CAND1Q86VP6 1230 aaKnown RBP13.04□□□□□ -0.32
VPS16-202ENST00000380445 SLC26A11Q86WA9 606 aa13.04□□□□□ -0.32
VPS16-202ENST00000380445 MZB1Q8WU39 189 aa13.04□□□□□ -0.32
VPS16-202ENST00000380445 TRIB2Q92519 343 aa13.04□□□□□ -0.32
VPS16-202ENST00000380445 ARHGEF4Q9NR80 690 aa13.04□□□□□ -0.32
VPS16-202ENST00000380445 DNAJC8O75937 253 aaPredicted RBP13.03□□□□□ -0.32
VPS16-202ENST00000380445 ODC1P11926 461 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 FOXN2P32314 431 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 TM4SF4P48230 202 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 DAOAP59103 153 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 PDK1Q15118 436 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 SYCP2LQ5T4T6 812 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 FAXCQ5TGI0 409 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 KIAA0319Q5VV43 1072 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 AGMOQ6ZNB7 445 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 LRRC6Q86X45 466 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 METTL23Q86XA0 190 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 PYROXD2Q8N2H3 581 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 NTAN1Q96AB6 310 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 PGBD4Q96DM1 585 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 CFAP36Q96G28 342 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 SMARCD1Q96GM5 515 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 PCED1BQ96HM7 432 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 ZNF180Q9UJW8 692 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 A0A0A0MRY4 1105 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 OPHN1O60890 802 aa13.03□□□□□ -0.32
VPS16-202ENST00000380445 KRT37O76014 449 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms