RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 NRXN2Q9P2S2 1712 aa12.88□□□□□ -0.35
PRPF40B-202ENST00000380281 SPATA31C2B4DYI2 1134 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 MICAL2O94851 1124 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 PTPRAP18433 802 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 MSX2P35548 267 aaPredicted RBP12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 NUMBP49757 651 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 EMP3P54852 163 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 AP2B1P63010 937 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 SLC25A3Q00325 362 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 VWA5B1Q5TIE3 1220 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 KLHL35Q6PF15 583 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 GADL1Q6ZQY3 521 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 RTKN2Q8IZC4 609 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 UNKQ9C0B0 810 aaKnown RBP12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 GRIP2Q9C0E4 1043 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 C20orf27Q9GZN8 174 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 ELOVL4Q9GZR5 314 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 DHX35Q9H5Z1 703 aaKnown RBP12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 DDX56Q9NY93 547 aaKnown RBP12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 PTTG2Q9NZH5 202 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 DRG1Q9Y295 367 aaKnown RBP12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 FARP1Q9Y4F1 1045 aaPredicted RBP12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 DCAF8L1A6NGE4 600 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 OGTO15294 1046 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 TBC1D12O60347 775 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 ASPAP45381 313 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 DEFB132Q7Z7B7 95 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 ZBTB8OSQ8IWT0 167 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 FLAD1Q8NFF5 587 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 AGAP3Q96P47 875 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 SMYD2Q9NRG4 433 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 WDR37Q9Y2I8 494 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 BRCA2P51587 3418 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 C3orf70A6NLC5 250 aaPredicted RBP12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 PRR5-ARHGAP8B1AHC4 643 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 H0YCG3 227 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 MSCO60682 206 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 USP12O75317 370 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 VTNP04004 478 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 PDGFRBP09619 1106 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 RARBP10826 455 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 ARL2P36404 184 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 OXCT1P55809 520 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 YWHAEP62258 255 aaKnown RBP12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 ARHGAP8P85298 464 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 SULT2A1Q06520 285 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 MMEL1Q495T6 779 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 KCTD21Q4G0X4 260 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 ATF7IP2Q5U623 682 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 BBS12Q6ZW61 710 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 ACOT1Q86TX2 421 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 XYLT1Q86Y38 959 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 RBM15BQ8NDT2 890 aaKnown RBP12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 KLHL4Q9C0H6 718 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 RPF1Q9H9Y2 349 aaKnown RBP12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 KCNK13Q9HB14 408 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 PCDHGB4Q9UN71 923 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 PCDHGB5Q9Y5G0 923 aa12.87□□□□□ -0.35
PRPF40B-202ENST00000380281 LACTBL1A8MY62 500 aa12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 E2F6O75461 281 aa12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 ARIH2O95376 493 aa12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 CSH1P0DML2 217 aa12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 CSH2P0DML3 217 aa12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 NCF2P19878 526 aaPredicted RBP12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 RABGGTBP53611 331 aa12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 CDK16Q00536 496 aa12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 PTPN11Q06124 597 aaPredicted RBP12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 PDK3Q15120 406 aa12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 TREML2Q5T2D2 321 aa12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 CES4AQ5XG92 561 aa12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 JADE1Q6IE81 842 aa12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 OLFML1Q6UWY5 402 aa12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 SLC15A3Q8IY34 581 aa12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 RIN3Q8TB24 985 aa12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 E2F7Q96AV8 911 aa12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 PGBD4Q96DM1 585 aa12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 CXCL16Q9H2A7 254 aa12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 MAN1C1Q9NR34 630 aa12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 TMPRSS4Q9NRS4 437 aa12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 ZNF358Q9NW07 568 aa12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 DOLKQ9UPQ8 538 aa12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 SMIM31A0A1B0GVY4 71 aa12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 ATP9BO43861 1147 aa12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 HNRNPCL1O60812 293 aaKnown RBP12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 IQCF3P0C7M6 154 aa12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 VCLP18206 1134 aa12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 SH3BGRP55822 239 aaPredicted RBP12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 GBE1Q04446 702 aa12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 MSLNQ13421 630 aaPredicted RBP12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 DCTN2Q13561 401 aaKnown RBP12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 TNFAIP1Q13829 316 aa12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 NADK2Q4G0N4 442 aa12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 MAP1SQ66K74 1059 aaPredicted RBP12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 TRNP1Q6NT89 227 aa12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 RGS9BPQ6ZS82 235 aa12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 FBXO16Q8IX29 292 aaPredicted RBP12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 C1orf127Q8N9H9 656 aa12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 CLEC4CQ8WTT0 213 aa12.86□□□□□ -0.35
PRPF40B-202ENST00000380281 ACO2Q99798 780 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms