RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 ANO3Q9BYT9 981 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 DBNDD1Q9H9R9 158 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 GMIPQ9P107 970 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 DNMT3BQ9UBC3 853 aaKnown RBP7.72□□□□□ -1.17
CDKL5-201ENST00000379989 NENFQ9UMX5 172 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 SMG5Q9UPR3 1016 aaKnown RBP7.72□□□□□ -1.17
CDKL5-201ENST00000379989 GNEQ9Y223 722 aaKnown RBP7.72□□□□□ -1.17
CDKL5-201ENST00000379989 PP2D1A8MPX8 630 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 ZNF701M0R085 212 aaPredicted RBP7.72□□□□□ -1.17
CDKL5-201ENST00000379989 TYROBPO43914 113 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 MAPTP10636 758 aaKnown RBP7.72□□□□□ -1.17
CDKL5-201ENST00000379989 PLCG1P19174 1290 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 IL32P24001 234 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 CPOXP36551 454 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 ARL1P40616 181 aaPredicted RBP7.72□□□□□ -1.17
CDKL5-201ENST00000379989 NPEPPSP55786 919 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 GNG2P59768 71 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 GNA12Q03113 381 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 DPYSQ14117 519 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 TRIP13Q15645 432 aaPredicted RBP7.72□□□□□ -1.17
CDKL5-201ENST00000379989 FGD3Q5JSP0 725 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 CCBE1Q6UXH8 406 aaPredicted RBP7.72□□□□□ -1.17
CDKL5-201ENST00000379989 IRF2BP2Q7Z5L9 587 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 DCP2Q8IU60 420 aaKnown RBP7.72□□□□□ -1.17
CDKL5-201ENST00000379989 LURAP1LQ8IV03 231 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 ZFPM1Q8IX07 1006 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 GALNT6Q8NCL4 622 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 GLMNQ92990 594 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 PMEPA1Q969W9 287 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 FERD3LQ96RJ6 166 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 TRIT1Q9H3H1 467 aaKnown RBP7.72□□□□□ -1.17
CDKL5-201ENST00000379989 RPF2Q9H7B2 306 aaKnown RBP7.72□□□□□ -1.17
CDKL5-201ENST00000379989 DNAJC18Q9H819 358 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 CAAP1Q9H8G2 361 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 IFT122Q9HBG6 1241 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 RIC8BQ9NVN3 520 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 JAG2Q9Y219 1238 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 ARHGAP42A6NI28 874 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 MEI4A8MW99 385 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 SMIM22K7EJ46 135 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 MSI1O43347 362 aaKnown RBP7.72□□□□□ -1.17
CDKL5-201ENST00000379989 MYL2P10916 166 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 ADRA1DP25100 572 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 KCNJ1P48048 391 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 PKN2Q16513 984 aaKnown RBP7.72□□□□□ -1.17
CDKL5-201ENST00000379989 AOC3Q16853 763 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 PPM1LQ5SGD2 360 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 CIAPIN1Q6FI81 312 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 ANKRD26P1Q6NSI1 321 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 LRRC55Q6ZSA7 311 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 GPR141Q7Z602 305 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 SETD3Q86TU7 594 aaPredicted RBP7.72□□□□□ -1.17
CDKL5-201ENST00000379989 TTC13Q8NBP0 860 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 C7orf57Q8NEG2 295 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 SGCDQ92629 289 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 PWWP2AQ96N64 755 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 SMYD3Q9H7B4 428 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 MOV10Q9HCE1 1003 aaKnown RBP7.72□□□□□ -1.17
CDKL5-201ENST00000379989 TAGLN3Q9UI15 199 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 RWDD3Q9Y3V2 267 aa7.72□□□□□ -1.17
CDKL5-201ENST00000379989 B8ZZF3 427 aa7.71□□□□□ -1.17
CDKL5-201ENST00000379989 H3BMQ9 156 aa7.71□□□□□ -1.17
CDKL5-201ENST00000379989 MARCH6O60337 910 aa7.71□□□□□ -1.17
CDKL5-201ENST00000379989 CCNT2O60583 730 aaKnown RBP7.71□□□□□ -1.17
CDKL5-201ENST00000379989 NDUFB10O96000 172 aa7.71□□□□□ -1.17
CDKL5-201ENST00000379989 C8BP07358 591 aa7.71□□□□□ -1.17
CDKL5-201ENST00000379989 PHC1P78364 1004 aa7.71□□□□□ -1.17
CDKL5-201ENST00000379989 PTK2BQ14289 1009 aa7.71□□□□□ -1.17
CDKL5-201ENST00000379989 SCARA3Q6AZY7 606 aa7.71□□□□□ -1.17
CDKL5-201ENST00000379989 LYSMD3Q7Z3D4 306 aa7.71□□□□□ -1.17
CDKL5-201ENST00000379989 CCDC105Q8IYK2 499 aa7.71□□□□□ -1.17
CDKL5-201ENST00000379989 LILRB2Q8N423 598 aa7.71□□□□□ -1.17
CDKL5-201ENST00000379989 GLIS3Q8NEA6 775 aa7.71□□□□□ -1.17
CDKL5-201ENST00000379989 JADE3Q92613 823 aa7.71□□□□□ -1.17
CDKL5-201ENST00000379989 ZUFSPQ96AP4 578 aa7.71□□□□□ -1.17
CDKL5-201ENST00000379989 COG8Q96MW5 612 aa7.71□□□□□ -1.17
CDKL5-201ENST00000379989 RIT2Q99578 217 aa7.71□□□□□ -1.17
CDKL5-201ENST00000379989 CLPBQ9H078 707 aa7.71□□□□□ -1.17
CDKL5-201ENST00000379989 ANLNQ9NQW6 1124 aa7.71□□□□□ -1.17
CDKL5-201ENST00000379989 SEPT10Q9P0V9 454 aa7.71□□□□□ -1.17
CDKL5-201ENST00000379989 CFL2Q9Y281 166 aa7.71□□□□□ -1.17
CDKL5-201ENST00000379989 RNF11Q9Y3C5 154 aa7.71□□□□□ -1.17
CDKL5-201ENST00000379989 SF3B1O75533 1304 aaKnown RBP eCLIP7.71□□□□□ -1.18
CDKL5-201ENST00000379989 GOLGA8QA0A0J9YX86 632 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 GOLGA8OA6NCC3 632 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 DDTLA6NHG4 134 aaPredicted RBP7.71□□□□□ -1.18
CDKL5-201ENST00000379989 GOLGA8NF8WBI6 632 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 GOLGA8RI6L899 631 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 ADAMTS3O15072 1205 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 JRKO75564 520 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 H2AFZP0C0S5 128 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 COILP38432 576 aaPredicted RBP7.71□□□□□ -1.18
CDKL5-201ENST00000379989 PPATQ06203 517 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 STAT4Q14765 748 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 DALRD3Q5D0E6 543 aaKnown RBP7.71□□□□□ -1.18
CDKL5-201ENST00000379989 UBE2UQ5VVX9 321 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 H2AFVQ71UI9 128 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 SH3BP5LQ7L8J4 393 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 TICAM1Q8IUC6 712 aa7.71□□□□□ -1.18
CDKL5-201ENST00000379989 TMEM151BQ8IW70 566 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms